RNA–Protein interactions for RNA: ENST00000516483.1

RN7SKP238-201, Transcript of RNA, 7SK small nuclear pseudogene 238, humanhuman

BASIC

Gene RN7SKP238, Length 249 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP238-201ENST00000516483 NISCHQ9Y2I1 1504 aa14.97□□□□□ -0.01
RN7SKP238-201ENST00000516483 ABCC9O60706 1549 aa13.39□□□□□ -0.27
RN7SKP238-201ENST00000516483 CCDC180Q9P1Z9 1646 aa13.33□□□□□ -0.28
RN7SKP238-201ENST00000516483 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
RN7SKP238-201ENST00000516483 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
RN7SKP238-201ENST00000516483 NACADO15069 1562 aa12.59□□□□□ -0.39
RN7SKP238-201ENST00000516483 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
RN7SKP238-201ENST00000516483 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
RN7SKP238-201ENST00000516483 UNC13AQ9UPW8 1703 aa12.43□□□□□ -0.42
RN7SKP238-201ENST00000516483 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
RN7SKP238-201ENST00000516483 MYO15BQ96JP2 1530 aa12.36□□□□□ -0.43
RN7SKP238-201ENST00000516483 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
RN7SKP238-201ENST00000516483 SCRIBQ14160 1630 aa12.32□□□□□ -0.44
RN7SKP238-201ENST00000516483 DCAF1Q9Y4B6 1507 aa12.27□□□□□ -0.44
RN7SKP238-201ENST00000516483 SHROOM4Q9ULL8 1493 aa12.04□□□□□ -0.48
RN7SKP238-201ENST00000516483 CC2D2AQ9P2K1 1620 aa12.04□□□□□ -0.48
RN7SKP238-201ENST00000516483 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
RN7SKP238-201ENST00000516483 CECR2Q9BXF3 1484 aa11.99□□□□□ -0.49
RN7SKP238-201ENST00000516483 SMARCA4P51532 1647 aa11.68□□□□□ -0.54
RN7SKP238-201ENST00000516483 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
RN7SKP238-201ENST00000516483 NCAPD3P42695 1498 aa11.61□□□□□ -0.55
RN7SKP238-201ENST00000516483 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
RN7SKP238-201ENST00000516483 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
RN7SKP238-201ENST00000516483 MROH2BQ7Z745 1585 aa11.59□□□□□ -0.55
RN7SKP238-201ENST00000516483 BAZ1BQ9UIG0 1483 aaKnown RBP11.57□□□□□ -0.56
RN7SKP238-201ENST00000516483 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
RN7SKP238-201ENST00000516483 ERCC6Q03468 1493 aa11.54□□□□□ -0.56
RN7SKP238-201ENST00000516483 NESP48681 1621 aa11.53□□□□□ -0.56
RN7SKP238-201ENST00000516483 PEG3Q9GZU2 1588 aa11.48□□□□□ -0.57
RN7SKP238-201ENST00000516483 WIZO95785 1651 aa11.48□□□□□ -0.57
RN7SKP238-201ENST00000516483 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
RN7SKP238-201ENST00000516483 CUX2O14529 1486 aa11.37□□□□□ -0.59
RN7SKP238-201ENST00000516483 KIF21AQ7Z4S6 1674 aa11.36□□□□□ -0.59
RN7SKP238-201ENST00000516483 LAMC3Q9Y6N6 1575 aa11.35□□□□□ -0.59
RN7SKP238-201ENST00000516483 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
RN7SKP238-201ENST00000516483 CADPSQ9ULU8 1353 aa11.3□□□□□ -0.6
RN7SKP238-201ENST00000516483 PDS5BQ9NTI5 1447 aa11.3□□□□□ -0.6
RN7SKP238-201ENST00000516483 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
RN7SKP238-201ENST00000516483 DNAJC5Q9H3Z4 198 aa11.25□□□□□ -0.61
RN7SKP238-201ENST00000516483 MRC2Q9UBG0 1479 aa11.23□□□□□ -0.61
RN7SKP238-201ENST00000516483 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
RN7SKP238-201ENST00000516483 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
RN7SKP238-201ENST00000516483 CFTRP13569 1480 aa11.19□□□□□ -0.62
RN7SKP238-201ENST00000516483 CCDC88BA6NC98 1476 aa11.18□□□□□ -0.62
RN7SKP238-201ENST00000516483 WDR62O43379 1518 aa11.17□□□□□ -0.62
RN7SKP238-201ENST00000516483 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
RN7SKP238-201ENST00000516483 SUPT5HO00267 1087 aaKnown RBP11.09□□□□□ -0.63
RN7SKP238-201ENST00000516483 PRDM2Q13029 1718 aa11.09□□□□□ -0.63
RN7SKP238-201ENST00000516483 TOPBP1Q92547 1522 aa11.01□□□□□ -0.65
RN7SKP238-201ENST00000516483 ZNF608Q9ULD9 1512 aaPredicted RBP11□□□□□ -0.65
RN7SKP238-201ENST00000516483 TRIM41Q8WV44 630 aa10.98□□□□□ -0.65
RN7SKP238-201ENST00000516483 DNMBPQ6XZF7 1577 aa10.96□□□□□ -0.65
RN7SKP238-201ENST00000516483 IFT140Q96RY7 1462 aa10.95□□□□□ -0.66
RN7SKP238-201ENST00000516483 EIF4G3O43432 1585 aaKnown RBP10.92□□□□□ -0.66
RN7SKP238-201ENST00000516483 RAD54L2Q9Y4B4 1467 aa10.92□□□□□ -0.66
RN7SKP238-201ENST00000516483 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
RN7SKP238-201ENST00000516483 AQRO60306 1485 aaKnown RBP eCLIP10.91□□□□□ -0.66
RN7SKP238-201ENST00000516483 POLA1P09884 1462 aaPredicted RBP10.91□□□□□ -0.66
RN7SKP238-201ENST00000516483 ABCC8Q09428 1581 aa10.9□□□□□ -0.66
RN7SKP238-201ENST00000516483 CUX1P39880 1505 aa10.89□□□□□ -0.67
RN7SKP238-201ENST00000516483 FGD5Q6ZNL6 1462 aa10.88□□□□□ -0.67
RN7SKP238-201ENST00000516483 TARBP1Q13395 1621 aaKnown RBP10.88□□□□□ -0.67
RN7SKP238-201ENST00000516483 FBLN2P98095 1184 aa10.88□□□□□ -0.67
RN7SKP238-201ENST00000516483 TDRD9Q8NDG6 1382 aaKnown RBP10.88□□□□□ -0.67
RN7SKP238-201ENST00000516483 SOGA1O94964 1423 aa10.86□□□□□ -0.67
RN7SKP238-201ENST00000516483 CHD1O14646 1710 aa10.83□□□□□ -0.68
RN7SKP238-201ENST00000516483 SNAPC4Q5SXM2 1469 aa10.81□□□□□ -0.68
RN7SKP238-201ENST00000516483 RIMBP3CA6NJZ7 1639 aa10.78□□□□□ -0.68
RN7SKP238-201ENST00000516483 RIMBP3BA6NNM3 1639 aa10.78□□□□□ -0.68
RN7SKP238-201ENST00000516483 RIMBP3Q9UFD9 1639 aa10.78□□□□□ -0.68
RN7SKP238-201ENST00000516483 ARHGEF11O15085 1522 aa10.76□□□□□ -0.69
RN7SKP238-201ENST00000516483 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
RN7SKP238-201ENST00000516483 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
RN7SKP238-201ENST00000516483 WDR97A6NE52 1622 aa10.75□□□□□ -0.69
RN7SKP238-201ENST00000516483 WRNQ14191 1432 aaPredicted RBP eCLIP10.74□□□□□ -0.69
RN7SKP238-201ENST00000516483 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
RN7SKP238-201ENST00000516483 GAPVD1Q14C86 1478 aa10.74□□□□□ -0.69
RN7SKP238-201ENST00000516483 PBRM1Q86U86 1689 aa10.73□□□□□ -0.69
RN7SKP238-201ENST00000516483 CYB5RLQ6IPT4 315 aa10.72□□□□□ -0.69
RN7SKP238-201ENST00000516483 ABCA10Q8WWZ4 1543 aa10.7□□□□□ -0.7
RN7SKP238-201ENST00000516483 MAGI1Q96QZ7 1491 aaPredicted RBP10.7□□□□□ -0.7
RN7SKP238-201ENST00000516483 TOP2BQ02880 1626 aa10.69□□□□□ -0.7
RN7SKP238-201ENST00000516483 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
RN7SKP238-201ENST00000516483 BIVM-ERCC5R4GMW8 1640 aa10.69□□□□□ -0.7
RN7SKP238-201ENST00000516483 SYNJ2O15056 1496 aa10.68□□□□□ -0.7
RN7SKP238-201ENST00000516483 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
RN7SKP238-201ENST00000516483 CLASP1Q7Z460 1538 aa10.65□□□□□ -0.7
RN7SKP238-201ENST00000516483 ADAMTS12P58397 1594 aa10.63□□□□□ -0.71
RN7SKP238-201ENST00000516483 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
RN7SKP238-201ENST00000516483 TRHP20396 242 aaPredicted RBP10.6□□□□□ -0.71
RN7SKP238-201ENST00000516483 CEP170Q5SW79 1584 aa10.59□□□□□ -0.71
RN7SKP238-201ENST00000516483 ERCC6L2Q5T890 1561 aa10.58□□□□□ -0.72
RN7SKP238-201ENST00000516483 FHAD1B1AJZ9 1412 aa10.58□□□□□ -0.72
RN7SKP238-201ENST00000516483 ERICH3Q5RHP9 1530 aa10.56□□□□□ -0.72
RN7SKP238-201ENST00000516483 NUP160Q12769 1436 aa10.54□□□□□ -0.72
RN7SKP238-201ENST00000516483 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
RN7SKP238-201ENST00000516483 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
RN7SKP238-201ENST00000516483 PRG4Q92954 1404 aaPredicted RBP10.49□□□□□ -0.73
RN7SKP238-201ENST00000516483 IGF1RP08069 1367 aa10.48□□□□□ -0.73
RN7SKP238-201ENST00000516483 RUSC2Q8N2Y8 1516 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms