RNA–Protein interactions for RNA: ENST00000515930.1

RNU6-1053P-201, Transcript of RNA, U6 small nuclear 1053, pseudogene, humanhuman

BASIC

Gene RNU6-1053P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1053P-201ENST00000515930 DNAJC5Q9H3Z4 198 aa5.87□□□□□ -1.47
RNU6-1053P-201ENST00000515930 DNAJC5BQ9UF47 199 aa5.7□□□□□ -1.5
RNU6-1053P-201ENST00000515930 TRIM41Q8WV44 630 aa5.29□□□□□ -1.56
RNU6-1053P-201ENST00000515930 AEBP2Q6ZN18 517 aaPredicted RBP5.26□□□□□ -1.57
RNU6-1053P-201ENST00000515930 ABCC9O60706 1549 aa5.24□□□□□ -1.57
RNU6-1053P-201ENST00000515930 ILDR1Q86SU0 546 aaPredicted RBP5.2□□□□□ -1.58
RNU6-1053P-201ENST00000515930 SOCS7O14512 581 aa4.9□□□□□ -1.63
RNU6-1053P-201ENST00000515930 PABPN1Q86U42 306 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-1053P-201ENST00000515930 CUX2O14529 1486 aa4.87□□□□□ -1.63
RNU6-1053P-201ENST00000515930 LMTK3Q96Q04 1460 aa4.84□□□□□ -1.63
RNU6-1053P-201ENST00000515930 CECR2Q9BXF3 1484 aa4.82□□□□□ -1.64
RNU6-1053P-201ENST00000515930 NISCHQ9Y2I1 1504 aa4.77□□□□□ -1.65
RNU6-1053P-201ENST00000515930 TRHP20396 242 aaPredicted RBP4.76□□□□□ -1.65
RNU6-1053P-201ENST00000515930 ILDR2Q71H61 639 aa4.75□□□□□ -1.65
RNU6-1053P-201ENST00000515930 FBXO41Q8TF61 875 aa4.72□□□□□ -1.65
RNU6-1053P-201ENST00000515930 DISP3Q9P2K9 1392 aa4.65□□□□□ -1.67
RNU6-1053P-201ENST00000515930 ERCC6Q03468 1493 aa4.62□□□□□ -1.67
RNU6-1053P-201ENST00000515930 CC2D2AQ9P2K1 1620 aa4.61□□□□□ -1.67
RNU6-1053P-201ENST00000515930 OSCARQ8IYS5 282 aa4.58□□□□□ -1.68
RNU6-1053P-201ENST00000515930 RB1CC1Q8TDY2 1594 aa4.57□□□□□ -1.68
RNU6-1053P-201ENST00000515930 CYB5RLQ6IPT4 315 aa4.53□□□□□ -1.68
RNU6-1053P-201ENST00000515930 KDM4FA0A1W2PPD8 638 aa4.49□□□□□ -1.69
RNU6-1053P-201ENST00000515930 ERCC6L2Q5T890 1561 aa4.48□□□□□ -1.69
RNU6-1053P-201ENST00000515930 RIMBP3CA6NJZ7 1639 aa4.45□□□□□ -1.7
RNU6-1053P-201ENST00000515930 RIMBP3BA6NNM3 1639 aa4.45□□□□□ -1.7
RNU6-1053P-201ENST00000515930 RIMBP3Q9UFD9 1639 aa4.45□□□□□ -1.7
RNU6-1053P-201ENST00000515930 BICRAQ9NZM4 1560 aa4.43□□□□□ -1.7
RNU6-1053P-201ENST00000515930 EIF4G1Q04637 1599 aaKnown RBP4.42□□□□□ -1.7
RNU6-1053P-201ENST00000515930 ARHGEF11O15085 1522 aa4.41□□□□□ -1.7
RNU6-1053P-201ENST00000515930 SYNJ2O15056 1496 aa4.38□□□□□ -1.71
RNU6-1053P-201ENST00000515930 SPATA31D1Q6ZQQ2 1576 aa4.37□□□□□ -1.71
RNU6-1053P-201ENST00000515930 HECW2Q9P2P5 1572 aa4.37□□□□□ -1.71
RNU6-1053P-201ENST00000515930 IFFO2Q5TF58 517 aa4.37□□□□□ -1.71
RNU6-1053P-201ENST00000515930 SHROOM4Q9ULL8 1493 aa4.36□□□□□ -1.71
RNU6-1053P-201ENST00000515930 NACADO15069 1562 aa4.35□□□□□ -1.71
RNU6-1053P-201ENST00000515930 BAZ1AQ9NRL2 1556 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1053P-201ENST00000515930 ARAP1Q96P48 1450 aa4.32□□□□□ -1.72
RNU6-1053P-201ENST00000515930 THOC2Q8NI27 1593 aaKnown RBP4.29□□□□□ -1.72
RNU6-1053P-201ENST00000515930 DCAF8L2P0C7V8 631 aa4.29□□□□□ -1.72
RNU6-1053P-201ENST00000515930 CCDC180Q9P1Z9 1646 aa4.28□□□□□ -1.72
RNU6-1053P-201ENST00000515930 CERKQ8TCT0 537 aa4.26□□□□□ -1.73
RNU6-1053P-201ENST00000515930 UNC13AQ9UPW8 1703 aa4.24□□□□□ -1.73
RNU6-1053P-201ENST00000515930 NESP48681 1621 aa4.24□□□□□ -1.73
RNU6-1053P-201ENST00000515930 SMARCA2P51531 1590 aa4.22□□□□□ -1.73
RNU6-1053P-201ENST00000515930 ADGRL1O94910 1474 aa4.2□□□□□ -1.74
RNU6-1053P-201ENST00000515930 RSF1Q96T23 1441 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1053P-201ENST00000515930 PDS5BQ9NTI5 1447 aa4.15□□□□□ -1.74
RNU6-1053P-201ENST00000515930 MRC2Q9UBG0 1479 aa4.12□□□□□ -1.75
RNU6-1053P-201ENST00000515930 PHF23Q9BUL5 403 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1053P-201ENST00000515930 PCDH10Q9P2E7 1040 aa4.12□□□□□ -1.75
RNU6-1053P-201ENST00000515930 SLC34A2O95436 690 aa4.11□□□□□ -1.75
RNU6-1053P-201ENST00000515930 WDR62O43379 1518 aa4.1□□□□□ -1.75
RNU6-1053P-201ENST00000515930 NCAPD3P42695 1498 aa4.08□□□□□ -1.76
RNU6-1053P-201ENST00000515930 FAM69CQ0P6D2 419 aa4.08□□□□□ -1.76
RNU6-1053P-201ENST00000515930 SRCAPQ6ZRS2 3230 aa4.08□□□□□ -1.76
RNU6-1053P-201ENST00000515930 FBLN2P98095 1184 aa4.06□□□□□ -1.76
RNU6-1053P-201ENST00000515930 KDM6BO15054 1643 aa4.06□□□□□ -1.76
RNU6-1053P-201ENST00000515930 SCRIBQ14160 1630 aa4.05□□□□□ -1.76
RNU6-1053P-201ENST00000515930 LAMC3Q9Y6N6 1575 aa4.04□□□□□ -1.76
RNU6-1053P-201ENST00000515930 MYO15BQ96JP2 1530 aa4.03□□□□□ -1.76
RNU6-1053P-201ENST00000515930 MED1Q15648 1581 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1053P-201ENST00000515930 KIF21AQ7Z4S6 1674 aa4.01□□□□□ -1.77
RNU6-1053P-201ENST00000515930 GAPVD1Q14C86 1478 aa4.01□□□□□ -1.77
RNU6-1053P-201ENST00000515930 HSPA2P54652 639 aa4□□□□□ -1.77
RNU6-1053P-201ENST00000515930 TOP2BQ02880 1626 aa3.98□□□□□ -1.77
RNU6-1053P-201ENST00000515930 ABCC10Q5T3U5 1492 aa3.98□□□□□ -1.77
RNU6-1053P-201ENST00000515930 PCF11O94913 1555 aaKnown RBP3.97□□□□□ -1.77
RNU6-1053P-201ENST00000515930 SENP3-EIF4A1A0A087X0R7 540 aa3.97□□□□□ -1.77
RNU6-1053P-201ENST00000515930 RBM33Q96EV2 1170 aaKnown RBP3.97□□□□□ -1.77
RNU6-1053P-201ENST00000515930 SNAPC4Q5SXM2 1469 aa3.97□□□□□ -1.77
RNU6-1053P-201ENST00000515930 ZNF608Q9ULD9 1512 aaPredicted RBP3.96□□□□□ -1.78
RNU6-1053P-201ENST00000515930 UBAP1LF5GYI3 381 aa3.96□□□□□ -1.78
RNU6-1053P-201ENST00000515930 ATAD2BQ9ULI0 1458 aa3.94□□□□□ -1.78
RNU6-1053P-201ENST00000515930 CADPSQ9ULU8 1353 aa3.94□□□□□ -1.78
RNU6-1053P-201ENST00000515930 HSPA1LP34931 641 aa3.94□□□□□ -1.78
RNU6-1053P-201ENST00000515930 UPF1Q92900 1129 aaKnown RBP eCLIP3.94□□□□□ -1.78
RNU6-1053P-201ENST00000515930 DMRT2Q9Y5R5 561 aa3.94□□□□□ -1.78
RNU6-1053P-201ENST00000515930 CEP164Q9UPV0 1460 aa3.93□□□□□ -1.78
RNU6-1053P-201ENST00000515930 LTBP4Q8N2S1 1624 aa3.93□□□□□ -1.78
RNU6-1053P-201ENST00000515930 PLPPR3Q6T4P5 718 aa3.93□□□□□ -1.78
RNU6-1053P-201ENST00000515930 RGS17Q9UGC6 210 aaPredicted RBP3.93□□□□□ -1.78
RNU6-1053P-201ENST00000515930 PTPRMP28827 1452 aa3.92□□□□□ -1.78
RNU6-1053P-201ENST00000515930 NPM1P06748 294 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU6-1053P-201ENST00000515930 KIF13AQ9H1H9 1805 aa3.92□□□□□ -1.78
RNU6-1053P-201ENST00000515930 PTPRTO14522 1441 aa3.92□□□□□ -1.78
RNU6-1053P-201ENST00000515930 IQSEC2Q5JU85 1478 aa3.92□□□□□ -1.78
RNU6-1053P-201ENST00000515930 CLASP1Q7Z460 1538 aa3.91□□□□□ -1.78
RNU6-1053P-201ENST00000515930 YY1P25490 414 aa3.91□□□□□ -1.78
RNU6-1053P-201ENST00000515930 IFT140Q96RY7 1462 aa3.91□□□□□ -1.78
RNU6-1053P-201ENST00000515930 HMGXB3Q12766 1538 aa3.9□□□□□ -1.78
RNU6-1053P-201ENST00000515930 CHMP7Q8WUX9 453 aaPredicted RBP3.9□□□□□ -1.79
RNU6-1053P-201ENST00000515930 POTEAQ6S8J7 498 aa3.89□□□□□ -1.79
RNU6-1053P-201ENST00000515930 SCAF1Q9H7N4 1312 aaKnown RBP3.89□□□□□ -1.79
RNU6-1053P-201ENST00000515930 FOXD1Q16676 465 aa3.88□□□□□ -1.79
RNU6-1053P-201ENST00000515930 ZRANB1Q9UGI0 708 aa3.87□□□□□ -1.79
RNU6-1053P-201ENST00000515930 CHD1O14646 1710 aa3.87□□□□□ -1.79
RNU6-1053P-201ENST00000515930 FANCD2Q9BXW9 1451 aa3.86□□□□□ -1.79
RNU6-1053P-201ENST00000515930 COL17A1Q9UMD9 1497 aaPredicted RBP3.86□□□□□ -1.79
RNU6-1053P-201ENST00000515930 DIP2BQ9P265 1576 aa3.86□□□□□ -1.79
RNU6-1053P-201ENST00000515930 YEATS2Q9ULM3 1422 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms