RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 AEBP2Q6ZN18 517 aaPredicted RBP26.19■■□□□ 1.78
COL4A5-210ENST00000515658 CHIC1Q5VXU3 224 aa25.61■■□□□ 1.69
COL4A5-210ENST00000515658 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
COL4A5-210ENST00000515658 PHF23Q9BUL5 403 aaPredicted RBP22.45■■□□□ 1.18
COL4A5-210ENST00000515658 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
COL4A5-210ENST00000515658 CCDC180Q9P1Z9 1646 aa21.82■■□□□ 1.08
COL4A5-210ENST00000515658 ABCC9O60706 1549 aa21.7■■□□□ 1.06
COL4A5-210ENST00000515658 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
COL4A5-210ENST00000515658 FOXD1Q16676 465 aa20.67■□□□□ 0.9
COL4A5-210ENST00000515658 POTEDQ86YR6 584 aa20.63■□□□□ 0.89
COL4A5-210ENST00000515658 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
COL4A5-210ENST00000515658 DCAF8L2P0C7V8 631 aa20.6■□□□□ 0.89
COL4A5-210ENST00000515658 NACADO15069 1562 aa20.55■□□□□ 0.88
COL4A5-210ENST00000515658 ZCCHC6Q5VYS8 1495 aaKnown RBP20.41■□□□□ 0.86
COL4A5-210ENST00000515658 MYO15BQ96JP2 1530 aa20.31■□□□□ 0.84
COL4A5-210ENST00000515658 UNC13AQ9UPW8 1703 aa20.3■□□□□ 0.84
COL4A5-210ENST00000515658 PABPN1Q86U42 306 aaKnown RBP eCLIP20.28■□□□□ 0.84
COL4A5-210ENST00000515658 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.82
COL4A5-210ENST00000515658 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
COL4A5-210ENST00000515658 BICRAQ9NZM4 1560 aa20.17■□□□□ 0.82
COL4A5-210ENST00000515658 SCRIBQ14160 1630 aa20.05■□□□□ 0.8
COL4A5-210ENST00000515658 PPP6R1Q9UPN7 881 aa19.82■□□□□ 0.76
COL4A5-210ENST00000515658 ADRA2BP18089 450 aa19.79■□□□□ 0.76
COL4A5-210ENST00000515658 MSH5O43196 834 aa19.7■□□□□ 0.74
COL4A5-210ENST00000515658 SHROOM4Q9ULL8 1493 aa19.67■□□□□ 0.74
COL4A5-210ENST00000515658 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.73
COL4A5-210ENST00000515658 CC2D2AQ9P2K1 1620 aa19.58■□□□□ 0.72
COL4A5-210ENST00000515658 PIAS4Q8N2W9 510 aaPredicted RBP19.48■□□□□ 0.71
COL4A5-210ENST00000515658 CECR2Q9BXF3 1484 aa19.45■□□□□ 0.7
COL4A5-210ENST00000515658 SMARCA4P51532 1647 aa19.1■□□□□ 0.65
COL4A5-210ENST00000515658 ATAD2BQ9ULI0 1458 aa19.03■□□□□ 0.64
COL4A5-210ENST00000515658 NCAPD3P42695 1498 aa19■□□□□ 0.63
COL4A5-210ENST00000515658 MROH2BQ7Z745 1585 aa18.99■□□□□ 0.63
COL4A5-210ENST00000515658 BAZ1AQ9NRL2 1556 aaPredicted RBP18.97■□□□□ 0.63
COL4A5-210ENST00000515658 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
COL4A5-210ENST00000515658 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
COL4A5-210ENST00000515658 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
COL4A5-210ENST00000515658 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
COL4A5-210ENST00000515658 WIZO95785 1651 aa18.78■□□□□ 0.6
COL4A5-210ENST00000515658 NESP48681 1621 aa18.77■□□□□ 0.6
COL4A5-210ENST00000515658 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
COL4A5-210ENST00000515658 ERCC6Q03468 1493 aa18.6■□□□□ 0.57
COL4A5-210ENST00000515658 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
COL4A5-210ENST00000515658 KIF21AQ7Z4S6 1674 aa18.48■□□□□ 0.55
COL4A5-210ENST00000515658 TOP2AP11388 1531 aaKnown RBP18.48■□□□□ 0.55
COL4A5-210ENST00000515658 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
COL4A5-210ENST00000515658 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
COL4A5-210ENST00000515658 CUX2O14529 1486 aa18.43■□□□□ 0.54
COL4A5-210ENST00000515658 PDS5BQ9NTI5 1447 aa18.35■□□□□ 0.53
COL4A5-210ENST00000515658 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
COL4A5-210ENST00000515658 CFTRP13569 1480 aa18.31■□□□□ 0.52
COL4A5-210ENST00000515658 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
COL4A5-210ENST00000515658 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
COL4A5-210ENST00000515658 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
COL4A5-210ENST00000515658 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
COL4A5-210ENST00000515658 CEP164Q9UPV0 1460 aa18.22■□□□□ 0.51
COL4A5-210ENST00000515658 WDR62O43379 1518 aa18.22■□□□□ 0.51
COL4A5-210ENST00000515658 URB2Q14146 1524 aaKnown RBP18.17■□□□□ 0.5
COL4A5-210ENST00000515658 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
COL4A5-210ENST00000515658 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
COL4A5-210ENST00000515658 SUPT5HO00267 1087 aaKnown RBP18.06■□□□□ 0.48
COL4A5-210ENST00000515658 TOPBP1Q92547 1522 aa17.97■□□□□ 0.47
COL4A5-210ENST00000515658 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
COL4A5-210ENST00000515658 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
COL4A5-210ENST00000515658 DNMBPQ6XZF7 1577 aa17.89■□□□□ 0.45
COL4A5-210ENST00000515658 NCBP3Q53F19 620 aaKnown RBP17.86■□□□□ 0.45
COL4A5-210ENST00000515658 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
COL4A5-210ENST00000515658 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
COL4A5-210ENST00000515658 CUX1P39880 1505 aa17.82■□□□□ 0.44
COL4A5-210ENST00000515658 TARBP1Q13395 1621 aaKnown RBP17.81■□□□□ 0.44
COL4A5-210ENST00000515658 POLA1P09884 1462 aaPredicted RBP17.81■□□□□ 0.44
COL4A5-210ENST00000515658 RAD54L2Q9Y4B4 1467 aa17.81■□□□□ 0.44
COL4A5-210ENST00000515658 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
COL4A5-210ENST00000515658 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
COL4A5-210ENST00000515658 ABCC8Q09428 1581 aa17.78■□□□□ 0.44
COL4A5-210ENST00000515658 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.43
COL4A5-210ENST00000515658 KCNA4P22459 653 aa17.76■□□□□ 0.43
COL4A5-210ENST00000515658 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
COL4A5-210ENST00000515658 SOGA1O94964 1423 aa17.7■□□□□ 0.42
COL4A5-210ENST00000515658 TDRD9Q8NDG6 1382 aaKnown RBP17.69■□□□□ 0.42
COL4A5-210ENST00000515658 OSCARQ8IYS5 282 aa17.64■□□□□ 0.41
COL4A5-210ENST00000515658 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
COL4A5-210ENST00000515658 WDR97A6NE52 1622 aa17.61■□□□□ 0.41
COL4A5-210ENST00000515658 CHD1O14646 1710 aa17.61■□□□□ 0.41
COL4A5-210ENST00000515658 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
COL4A5-210ENST00000515658 TRIM41Q8WV44 630 aa17.55■□□□□ 0.4
COL4A5-210ENST00000515658 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
COL4A5-210ENST00000515658 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
COL4A5-210ENST00000515658 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
COL4A5-210ENST00000515658 FBLN2P98095 1184 aa17.52■□□□□ 0.4
COL4A5-210ENST00000515658 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
COL4A5-210ENST00000515658 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
COL4A5-210ENST00000515658 ABCA5Q8WWZ7 1642 aa17.5■□□□□ 0.39
COL4A5-210ENST00000515658 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
COL4A5-210ENST00000515658 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
COL4A5-210ENST00000515658 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
COL4A5-210ENST00000515658 PBRM1Q86U86 1689 aa17.49■□□□□ 0.39
COL4A5-210ENST00000515658 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
COL4A5-210ENST00000515658 GRIN2BQ13224 1484 aa17.48■□□□□ 0.39
COL4A5-210ENST00000515658 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms