RNA–Protein interactions for RNA: ENST00000515510.1

THBS4-207, Transcript of thrombospondin 4, humanhuman

TSL 3

Gene THBS4, Length 612 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4-207ENST00000515510 NISCHQ9Y2I1 1504 aa21.06■□□□□ 0.96
THBS4-207ENST00000515510 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
THBS4-207ENST00000515510 ABCC9O60706 1549 aa17.94■□□□□ 0.46
THBS4-207ENST00000515510 DCAF8L2P0C7V8 631 aa17.61■□□□□ 0.41
THBS4-207ENST00000515510 ZCCHC6Q5VYS8 1495 aaKnown RBP17.58■□□□□ 0.41
THBS4-207ENST00000515510 NACADO15069 1562 aa17.44■□□□□ 0.38
THBS4-207ENST00000515510 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
THBS4-207ENST00000515510 RB1CC1Q8TDY2 1594 aa17.4■□□□□ 0.38
THBS4-207ENST00000515510 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
THBS4-207ENST00000515510 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
THBS4-207ENST00000515510 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
THBS4-207ENST00000515510 SHROOM4Q9ULL8 1493 aa16.88■□□□□ 0.29
THBS4-207ENST00000515510 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
THBS4-207ENST00000515510 BICRAQ9NZM4 1560 aa16.8■□□□□ 0.28
THBS4-207ENST00000515510 EIF4G1Q04637 1599 aaKnown RBP16.37■□□□□ 0.21
THBS4-207ENST00000515510 CECR2Q9BXF3 1484 aa16.35■□□□□ 0.21
THBS4-207ENST00000515510 BAZ1AQ9NRL2 1556 aaPredicted RBP16.33■□□□□ 0.2
THBS4-207ENST00000515510 SMARCA4P51532 1647 aa16.3■□□□□ 0.2
THBS4-207ENST00000515510 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
THBS4-207ENST00000515510 MROH2BQ7Z745 1585 aa16.23■□□□□ 0.19
THBS4-207ENST00000515510 RSF1Q96T23 1441 aaPredicted RBP16.15■□□□□ 0.18
THBS4-207ENST00000515510 DNAJC5BQ9UF47 199 aa16.15■□□□□ 0.18
THBS4-207ENST00000515510 SMARCA2P51531 1590 aa16.14■□□□□ 0.17
THBS4-207ENST00000515510 ATAD2BQ9ULI0 1458 aa16.11■□□□□ 0.17
THBS4-207ENST00000515510 WIZO95785 1651 aa16.1■□□□□ 0.17
THBS4-207ENST00000515510 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
THBS4-207ENST00000515510 SUPT5HO00267 1087 aaKnown RBP16.06■□□□□ 0.16
THBS4-207ENST00000515510 NCAPD3P42695 1498 aa16.05■□□□□ 0.16
THBS4-207ENST00000515510 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
THBS4-207ENST00000515510 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
THBS4-207ENST00000515510 TOP2AP11388 1531 aaKnown RBP15.94■□□□□ 0.14
THBS4-207ENST00000515510 CCDC88BA6NC98 1476 aa15.74■□□□□ 0.11
THBS4-207ENST00000515510 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
THBS4-207ENST00000515510 LAMC3Q9Y6N6 1575 aa15.62■□□□□ 0.09
THBS4-207ENST00000515510 NESP48681 1621 aa15.59■□□□□ 0.09
THBS4-207ENST00000515510 CFTRP13569 1480 aa15.58■□□□□ 0.08
THBS4-207ENST00000515510 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
THBS4-207ENST00000515510 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
THBS4-207ENST00000515510 ERCC6Q03468 1493 aa15.49■□□□□ 0.07
THBS4-207ENST00000515510 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.06
THBS4-207ENST00000515510 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
THBS4-207ENST00000515510 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
THBS4-207ENST00000515510 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.04
THBS4-207ENST00000515510 ABCC8Q09428 1581 aa15.28■□□□□ 0.04
THBS4-207ENST00000515510 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
THBS4-207ENST00000515510 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
THBS4-207ENST00000515510 DNMBPQ6XZF7 1577 aa15.25■□□□□ 0.03
THBS4-207ENST00000515510 URB2Q14146 1524 aaKnown RBP15.25■□□□□ 0.03
THBS4-207ENST00000515510 WDR62O43379 1518 aa15.24■□□□□ 0.03
THBS4-207ENST00000515510 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
THBS4-207ENST00000515510 CUX1P39880 1505 aa15.22■□□□□ 0.03
THBS4-207ENST00000515510 TOP2BQ02880 1626 aa15.18■□□□□ 0.02
THBS4-207ENST00000515510 CUX2O14529 1486 aa15.18■□□□□ 0.02
THBS4-207ENST00000515510 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
THBS4-207ENST00000515510 SYNJ1O43426 1573 aa15.17■□□□□ 0.02
THBS4-207ENST00000515510 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
THBS4-207ENST00000515510 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
THBS4-207ENST00000515510 CHIC1Q5VXU3 224 aa15.11■□□□□ 0.01
THBS4-207ENST00000515510 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
THBS4-207ENST00000515510 SOGA1O94964 1423 aa15.09■□□□□ 0.01
THBS4-207ENST00000515510 IFT140Q96RY7 1462 aa15.08■□□□□ 0
THBS4-207ENST00000515510 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
THBS4-207ENST00000515510 TARBP1Q13395 1621 aaKnown RBP15.03■□□□□ -0
THBS4-207ENST00000515510 ABCA10Q8WWZ4 1543 aa14.99□□□□□ -0.01
THBS4-207ENST00000515510 WDR97A6NE52 1622 aa14.98□□□□□ -0.01
THBS4-207ENST00000515510 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.02
THBS4-207ENST00000515510 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
THBS4-207ENST00000515510 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.02
THBS4-207ENST00000515510 KIF27Q86VH2 1401 aa14.93□□□□□ -0.02
THBS4-207ENST00000515510 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
THBS4-207ENST00000515510 GAPVD1Q14C86 1478 aa14.92□□□□□ -0.02
THBS4-207ENST00000515510 ABCA5Q8WWZ7 1642 aa14.9□□□□□ -0.02
THBS4-207ENST00000515510 PBRM1Q86U86 1689 aa14.88□□□□□ -0.03
THBS4-207ENST00000515510 GRIN2BQ13224 1484 aa14.88□□□□□ -0.03
THBS4-207ENST00000515510 EEA1Q15075 1411 aa14.84□□□□□ -0.03
THBS4-207ENST00000515510 FAM9AQ8IZU1 332 aaPredicted RBP14.84□□□□□ -0.03
THBS4-207ENST00000515510 ERICH3Q5RHP9 1530 aa14.83□□□□□ -0.04
THBS4-207ENST00000515510 RUSC2Q8N2Y8 1516 aa14.83□□□□□ -0.04
THBS4-207ENST00000515510 SNAPC4Q5SXM2 1469 aa14.81□□□□□ -0.04
THBS4-207ENST00000515510 MAGI1Q96QZ7 1491 aaPredicted RBP14.8□□□□□ -0.04
THBS4-207ENST00000515510 IGF1RP08069 1367 aa14.79□□□□□ -0.04
THBS4-207ENST00000515510 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
THBS4-207ENST00000515510 FBLN2P98095 1184 aa14.78□□□□□ -0.04
THBS4-207ENST00000515510 CUL7Q14999 1698 aa14.77□□□□□ -0.04
THBS4-207ENST00000515510 CHMP7Q8WUX9 453 aaPredicted RBP14.77□□□□□ -0.05
THBS4-207ENST00000515510 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
THBS4-207ENST00000515510 CARMIL1Q5VZK9 1371 aa14.75□□□□□ -0.05
THBS4-207ENST00000515510 ADAMTS12P58397 1594 aa14.74□□□□□ -0.05
THBS4-207ENST00000515510 SYNJ2O15056 1496 aa14.73□□□□□ -0.05
THBS4-207ENST00000515510 CHD1O14646 1710 aa14.72□□□□□ -0.05
THBS4-207ENST00000515510 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
THBS4-207ENST00000515510 GRIN2AQ12879 1464 aa14.67□□□□□ -0.06
THBS4-207ENST00000515510 PRXQ9BXM0 1461 aa14.66□□□□□ -0.06
THBS4-207ENST00000515510 OSCARQ8IYS5 282 aa14.65□□□□□ -0.06
THBS4-207ENST00000515510 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
THBS4-207ENST00000515510 KIF21BO75037 1637 aa14.64□□□□□ -0.07
THBS4-207ENST00000515510 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
THBS4-207ENST00000515510 GOLGA3Q08378 1498 aa14.6□□□□□ -0.07
THBS4-207ENST00000515510 CEP170Q5SW79 1584 aa14.57□□□□□ -0.08
THBS4-207ENST00000515510 NUP160Q12769 1436 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms