RNA–Protein interactions for RNA: ENST00000515410.1

RAB3A-204, Transcript of RAB3A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB3A, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3A-204ENST00000515410 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
RAB3A-204ENST00000515410 ABCC9O60706 1549 aa31.12■■■□□ 2.57
RAB3A-204ENST00000515410 CCDC180Q9P1Z9 1646 aa30.46■■■□□ 2.47
RAB3A-204ENST00000515410 DNAJC5BQ9UF47 199 aa29.8■■■□□ 2.36
RAB3A-204ENST00000515410 RB1CC1Q8TDY2 1594 aa29.34■■■□□ 2.29
RAB3A-204ENST00000515410 NACADO15069 1562 aa28.99■■■□□ 2.23
RAB3A-204ENST00000515410 PABPN1Q86U42 306 aaKnown RBP eCLIP28.87■■■□□ 2.21
RAB3A-204ENST00000515410 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
RAB3A-204ENST00000515410 UNC13AQ9UPW8 1703 aa28.57■■■□□ 2.16
RAB3A-204ENST00000515410 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
RAB3A-204ENST00000515410 MYO15BQ96JP2 1530 aa28.4■■■□□ 2.14
RAB3A-204ENST00000515410 CECR2Q9BXF3 1484 aa28.13■■■□□ 2.09
RAB3A-204ENST00000515410 SHROOM4Q9ULL8 1493 aa28.12■■■□□ 2.09
RAB3A-204ENST00000515410 CC2D2AQ9P2K1 1620 aa28.06■■■□□ 2.08
RAB3A-204ENST00000515410 DNAJC5Q9H3Z4 198 aa27.88■■■□□ 2.05
RAB3A-204ENST00000515410 EIF4G1Q04637 1599 aaKnown RBP27.86■■■□□ 2.05
RAB3A-204ENST00000515410 DCAF1Q9Y4B6 1507 aa27.78■■■□□ 2.04
RAB3A-204ENST00000515410 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.03
RAB3A-204ENST00000515410 SCRIBQ14160 1630 aa27.7■■■□□ 2.02
RAB3A-204ENST00000515410 CUX2O14529 1486 aa27.13■■□□□ 1.93
RAB3A-204ENST00000515410 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
RAB3A-204ENST00000515410 NCAPD3P42695 1498 aa26.8■■□□□ 1.88
RAB3A-204ENST00000515410 ATAD2BQ9ULI0 1458 aa26.6■■□□□ 1.85
RAB3A-204ENST00000515410 NESP48681 1621 aa26.54■■□□□ 1.84
RAB3A-204ENST00000515410 HMGXB3Q12766 1538 aa26.51■■□□□ 1.83
RAB3A-204ENST00000515410 SMARCA2P51531 1590 aa26.49■■□□□ 1.83
RAB3A-204ENST00000515410 THOC2Q8NI27 1593 aaKnown RBP26.4■■□□□ 1.82
RAB3A-204ENST00000515410 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
RAB3A-204ENST00000515410 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
RAB3A-204ENST00000515410 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
RAB3A-204ENST00000515410 LAMC3Q9Y6N6 1575 aa26.26■■□□□ 1.79
RAB3A-204ENST00000515410 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
RAB3A-204ENST00000515410 PEG3Q9GZU2 1588 aa26.16■■□□□ 1.78
RAB3A-204ENST00000515410 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
RAB3A-204ENST00000515410 KIF21AQ7Z4S6 1674 aa26.12■■□□□ 1.77
RAB3A-204ENST00000515410 MRC2Q9UBG0 1479 aa25.96■■□□□ 1.75
RAB3A-204ENST00000515410 CADPSQ9ULU8 1353 aa25.94■■□□□ 1.74
RAB3A-204ENST00000515410 WDR62O43379 1518 aa25.92■■□□□ 1.74
RAB3A-204ENST00000515410 MROH2BQ7Z745 1585 aa25.91■■□□□ 1.74
RAB3A-204ENST00000515410 OSCARQ8IYS5 282 aa25.77■■□□□ 1.72
RAB3A-204ENST00000515410 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
RAB3A-204ENST00000515410 FANCD2Q9BXW9 1451 aa25.64■■□□□ 1.69
RAB3A-204ENST00000515410 WIZO95785 1651 aa25.52■■□□□ 1.68
RAB3A-204ENST00000515410 CFTRP13569 1480 aa25.51■■□□□ 1.67
RAB3A-204ENST00000515410 RIMBP3CA6NJZ7 1639 aa25.47■■□□□ 1.67
RAB3A-204ENST00000515410 RIMBP3BA6NNM3 1639 aa25.47■■□□□ 1.67
RAB3A-204ENST00000515410 RIMBP3Q9UFD9 1639 aa25.47■■□□□ 1.67
RAB3A-204ENST00000515410 URB2Q14146 1524 aaKnown RBP25.46■■□□□ 1.67
RAB3A-204ENST00000515410 ARHGEF11O15085 1522 aa25.35■■□□□ 1.65
RAB3A-204ENST00000515410 IFT140Q96RY7 1462 aa25.25■■□□□ 1.63
RAB3A-204ENST00000515410 ZNF608Q9ULD9 1512 aaPredicted RBP25.25■■□□□ 1.63
RAB3A-204ENST00000515410 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
RAB3A-204ENST00000515410 TOP2AP11388 1531 aaKnown RBP25.21■■□□□ 1.63
RAB3A-204ENST00000515410 CYB5RLQ6IPT4 315 aa25.2■■□□□ 1.62
RAB3A-204ENST00000515410 TRHP20396 242 aaPredicted RBP25.13■■□□□ 1.61
RAB3A-204ENST00000515410 PRDM2Q13029 1718 aa25.08■■□□□ 1.61
RAB3A-204ENST00000515410 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
RAB3A-204ENST00000515410 EIF4G3O43432 1585 aaKnown RBP25.06■■□□□ 1.6
RAB3A-204ENST00000515410 ARAP1Q96P48 1450 aa25.06■■□□□ 1.6
RAB3A-204ENST00000515410 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
RAB3A-204ENST00000515410 CHD1O14646 1710 aa24.95■■□□□ 1.58
RAB3A-204ENST00000515410 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.58
RAB3A-204ENST00000515410 CCDC88BA6NC98 1476 aa24.92■■□□□ 1.58
RAB3A-204ENST00000515410 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
RAB3A-204ENST00000515410 FBLN2P98095 1184 aa24.9■■□□□ 1.58
RAB3A-204ENST00000515410 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
RAB3A-204ENST00000515410 AEBP2Q6ZN18 517 aaPredicted RBP24.88■■□□□ 1.57
RAB3A-204ENST00000515410 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
RAB3A-204ENST00000515410 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
RAB3A-204ENST00000515410 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
RAB3A-204ENST00000515410 RAD54L2Q9Y4B4 1467 aa24.68■■□□□ 1.54
RAB3A-204ENST00000515410 SNAPC4Q5SXM2 1469 aa24.66■■□□□ 1.54
RAB3A-204ENST00000515410 SOGA1O94964 1423 aa24.65■■□□□ 1.54
RAB3A-204ENST00000515410 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
RAB3A-204ENST00000515410 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
RAB3A-204ENST00000515410 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
RAB3A-204ENST00000515410 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
RAB3A-204ENST00000515410 SYNJ2O15056 1496 aa24.52■■□□□ 1.52
RAB3A-204ENST00000515410 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
RAB3A-204ENST00000515410 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
RAB3A-204ENST00000515410 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
RAB3A-204ENST00000515410 CUX1P39880 1505 aa24.38■■□□□ 1.49
RAB3A-204ENST00000515410 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
RAB3A-204ENST00000515410 PBRM1Q86U86 1689 aa24.29■■□□□ 1.48
RAB3A-204ENST00000515410 ERCC6L2Q5T890 1561 aa24.26■■□□□ 1.47
RAB3A-204ENST00000515410 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
RAB3A-204ENST00000515410 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
RAB3A-204ENST00000515410 GRIN2AQ12879 1464 aa24.2■■□□□ 1.47
RAB3A-204ENST00000515410 CEP170Q5SW79 1584 aa24.18■■□□□ 1.46
RAB3A-204ENST00000515410 NUP160Q12769 1436 aa24.16■■□□□ 1.46
RAB3A-204ENST00000515410 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
RAB3A-204ENST00000515410 ADAMTS12P58397 1594 aa24.08■■□□□ 1.45
RAB3A-204ENST00000515410 KIF13AQ9H1H9 1805 aa24.08■■□□□ 1.45
RAB3A-204ENST00000515410 FHAD1B1AJZ9 1412 aa24.01■■□□□ 1.43
RAB3A-204ENST00000515410 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
RAB3A-204ENST00000515410 PRG4Q92954 1404 aaPredicted RBP23.97■■□□□ 1.43
RAB3A-204ENST00000515410 ABCC10Q5T3U5 1492 aa23.96■■□□□ 1.43
RAB3A-204ENST00000515410 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
RAB3A-204ENST00000515410 KDM4FA0A1W2PPD8 638 aa23.91■■□□□ 1.42
RAB3A-204ENST00000515410 JPH4Q96JJ6 628 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 287.9 ms