RNA–Protein interactions for RNA: ENST00000515224.5

SPDL1-214, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 4

Gene SPDL1, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-214ENST00000515224 NISCHQ9Y2I1 1504 aa29.56■■■□□ 2.32
SPDL1-214ENST00000515224 CCDC180Q9P1Z9 1646 aa26.25■■□□□ 1.79
SPDL1-214ENST00000515224 ABCC9O60706 1549 aa25.29■■□□□ 1.64
SPDL1-214ENST00000515224 ZCCHC6Q5VYS8 1495 aaKnown RBP24.72■■□□□ 1.55
SPDL1-214ENST00000515224 NACADO15069 1562 aa24.55■■□□□ 1.52
SPDL1-214ENST00000515224 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
SPDL1-214ENST00000515224 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
SPDL1-214ENST00000515224 RB1CC1Q8TDY2 1594 aa24.51■■□□□ 1.51
SPDL1-214ENST00000515224 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
SPDL1-214ENST00000515224 UNC13AQ9UPW8 1703 aa24.06■■□□□ 1.44
SPDL1-214ENST00000515224 SCRIBQ14160 1630 aa23.92■■□□□ 1.42
SPDL1-214ENST00000515224 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
SPDL1-214ENST00000515224 PABPN1Q86U42 306 aaKnown RBP eCLIP23.6■■□□□ 1.37
SPDL1-214ENST00000515224 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
SPDL1-214ENST00000515224 EIF4G1Q04637 1599 aaKnown RBP23.12■■□□□ 1.29
SPDL1-214ENST00000515224 CECR2Q9BXF3 1484 aa22.97■■□□□ 1.27
SPDL1-214ENST00000515224 CC2D2AQ9P2K1 1620 aa22.95■■□□□ 1.26
SPDL1-214ENST00000515224 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
SPDL1-214ENST00000515224 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
SPDL1-214ENST00000515224 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
SPDL1-214ENST00000515224 MROH2BQ7Z745 1585 aa22.79■■□□□ 1.24
SPDL1-214ENST00000515224 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
SPDL1-214ENST00000515224 SMARCA2P51531 1590 aa22.69■■□□□ 1.22
SPDL1-214ENST00000515224 ATAD2BQ9ULI0 1458 aa22.67■■□□□ 1.22
SPDL1-214ENST00000515224 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
SPDL1-214ENST00000515224 RSF1Q96T23 1441 aaPredicted RBP22.6■■□□□ 1.21
SPDL1-214ENST00000515224 HMGXB3Q12766 1538 aa22.6■■□□□ 1.21
SPDL1-214ENST00000515224 WIZO95785 1651 aa22.58■■□□□ 1.21
SPDL1-214ENST00000515224 BAZ1BQ9UIG0 1483 aaKnown RBP22.51■■□□□ 1.19
SPDL1-214ENST00000515224 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
SPDL1-214ENST00000515224 SUPT5HO00267 1087 aaKnown RBP22.12■■□□□ 1.13
SPDL1-214ENST00000515224 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
SPDL1-214ENST00000515224 LAMC3Q9Y6N6 1575 aa22.02■■□□□ 1.12
SPDL1-214ENST00000515224 NESP48681 1621 aa21.99■■□□□ 1.11
SPDL1-214ENST00000515224 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
SPDL1-214ENST00000515224 CFTRP13569 1480 aa21.9■■□□□ 1.1
SPDL1-214ENST00000515224 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
SPDL1-214ENST00000515224 KIF21AQ7Z4S6 1674 aa21.82■■□□□ 1.08
SPDL1-214ENST00000515224 PDS5BQ9NTI5 1447 aa21.8■■□□□ 1.08
SPDL1-214ENST00000515224 ERCC6Q03468 1493 aa21.77■■□□□ 1.08
SPDL1-214ENST00000515224 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
SPDL1-214ENST00000515224 THOC2Q8NI27 1593 aaKnown RBP21.69■■□□□ 1.06
SPDL1-214ENST00000515224 CEP164Q9UPV0 1460 aa21.68■■□□□ 1.06
SPDL1-214ENST00000515224 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
SPDL1-214ENST00000515224 WDR62O43379 1518 aa21.55■■□□□ 1.04
SPDL1-214ENST00000515224 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
SPDL1-214ENST00000515224 CUX2O14529 1486 aa21.5■■□□□ 1.03
SPDL1-214ENST00000515224 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
SPDL1-214ENST00000515224 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
SPDL1-214ENST00000515224 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
SPDL1-214ENST00000515224 CUX1P39880 1505 aa21.38■■□□□ 1.01
SPDL1-214ENST00000515224 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
SPDL1-214ENST00000515224 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
SPDL1-214ENST00000515224 SYNJ1O43426 1573 aa21.29■■□□□ 1
SPDL1-214ENST00000515224 TOP2BQ02880 1626 aa21.29■■□□□ 1
SPDL1-214ENST00000515224 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
SPDL1-214ENST00000515224 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
SPDL1-214ENST00000515224 TARBP1Q13395 1621 aaKnown RBP21.21■□□□□ 0.99
SPDL1-214ENST00000515224 IFT140Q96RY7 1462 aa21.2■□□□□ 0.98
SPDL1-214ENST00000515224 WDR97A6NE52 1622 aa21.16■□□□□ 0.98
SPDL1-214ENST00000515224 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
SPDL1-214ENST00000515224 SOGA1O94964 1423 aa21.11■□□□□ 0.97
SPDL1-214ENST00000515224 EIF4G3O43432 1585 aaKnown RBP21.08■□□□□ 0.97
SPDL1-214ENST00000515224 ZNF608Q9ULD9 1512 aaPredicted RBP21.08■□□□□ 0.96
SPDL1-214ENST00000515224 ABCA10Q8WWZ4 1543 aa21.06■□□□□ 0.96
SPDL1-214ENST00000515224 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
SPDL1-214ENST00000515224 AQRO60306 1485 aaKnown RBP eCLIP20.96■□□□□ 0.95
SPDL1-214ENST00000515224 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
SPDL1-214ENST00000515224 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
SPDL1-214ENST00000515224 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
SPDL1-214ENST00000515224 TRIM41Q8WV44 630 aa20.88■□□□□ 0.93
SPDL1-214ENST00000515224 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
SPDL1-214ENST00000515224 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
SPDL1-214ENST00000515224 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.92
SPDL1-214ENST00000515224 SNAPC4Q5SXM2 1469 aa20.82■□□□□ 0.92
SPDL1-214ENST00000515224 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
SPDL1-214ENST00000515224 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
SPDL1-214ENST00000515224 CHD1O14646 1710 aa20.78■□□□□ 0.92
SPDL1-214ENST00000515224 ADAMTS12P58397 1594 aa20.78■□□□□ 0.92
SPDL1-214ENST00000515224 CUL7Q14999 1698 aa20.73■□□□□ 0.91
SPDL1-214ENST00000515224 RUSC2Q8N2Y8 1516 aa20.72■□□□□ 0.91
SPDL1-214ENST00000515224 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
SPDL1-214ENST00000515224 FHAD1B1AJZ9 1412 aa20.68■□□□□ 0.9
SPDL1-214ENST00000515224 IGF1RP08069 1367 aa20.67■□□□□ 0.9
SPDL1-214ENST00000515224 EEA1Q15075 1411 aa20.63■□□□□ 0.89
SPDL1-214ENST00000515224 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
SPDL1-214ENST00000515224 CHMP7Q8WUX9 453 aaPredicted RBP20.58■□□□□ 0.89
SPDL1-214ENST00000515224 FBLN2P98095 1184 aa20.57■□□□□ 0.88
SPDL1-214ENST00000515224 CARMIL1Q5VZK9 1371 aa20.57■□□□□ 0.88
SPDL1-214ENST00000515224 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
SPDL1-214ENST00000515224 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
SPDL1-214ENST00000515224 OSCARQ8IYS5 282 aa20.53■□□□□ 0.88
SPDL1-214ENST00000515224 NUP160Q12769 1436 aa20.53■□□□□ 0.88
SPDL1-214ENST00000515224 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
SPDL1-214ENST00000515224 RAPGEF2Q9Y4G8 1499 aa20.51■□□□□ 0.87
SPDL1-214ENST00000515224 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
SPDL1-214ENST00000515224 KIF21BO75037 1637 aa20.45■□□□□ 0.87
SPDL1-214ENST00000515224 FAM9AQ8IZU1 332 aaPredicted RBP20.43■□□□□ 0.86
SPDL1-214ENST00000515224 CTTNBP2Q8WZ74 1663 aa20.42■□□□□ 0.86
SPDL1-214ENST00000515224 DNAJC5Q9H3Z4 198 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms