RNA–Protein interactions for RNA: ENST00000515115.5

PDZD2-212, Transcript of PDZ domain containing 2, humanhuman

TSL 3

Gene PDZD2, Length 672 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-212ENST00000515115 NISCHQ9Y2I1 1504 aa30.21■■■□□ 2.43
PDZD2-212ENST00000515115 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
PDZD2-212ENST00000515115 ABCC9O60706 1549 aa26.21■■□□□ 1.79
PDZD2-212ENST00000515115 RB1CC1Q8TDY2 1594 aa25.33■■□□□ 1.65
PDZD2-212ENST00000515115 NACADO15069 1562 aa25.3■■□□□ 1.64
PDZD2-212ENST00000515115 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.62
PDZD2-212ENST00000515115 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
PDZD2-212ENST00000515115 MYO15BQ96JP2 1530 aa25.17■■□□□ 1.62
PDZD2-212ENST00000515115 DCAF1Q9Y4B6 1507 aa25.05■■□□□ 1.6
PDZD2-212ENST00000515115 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
PDZD2-212ENST00000515115 SCRIBQ14160 1630 aa24.5■■□□□ 1.51
PDZD2-212ENST00000515115 BICRAQ9NZM4 1560 aa24.43■■□□□ 1.5
PDZD2-212ENST00000515115 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
PDZD2-212ENST00000515115 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
PDZD2-212ENST00000515115 DNAJC5BQ9UF47 199 aa23.87■■□□□ 1.41
PDZD2-212ENST00000515115 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
PDZD2-212ENST00000515115 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
PDZD2-212ENST00000515115 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
PDZD2-212ENST00000515115 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
PDZD2-212ENST00000515115 SMARCA4P51532 1647 aa23.45■■□□□ 1.34
PDZD2-212ENST00000515115 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
PDZD2-212ENST00000515115 NCAPD3P42695 1498 aa23.29■■□□□ 1.32
PDZD2-212ENST00000515115 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
PDZD2-212ENST00000515115 HMGXB3Q12766 1538 aa23.23■■□□□ 1.31
PDZD2-212ENST00000515115 PEG3Q9GZU2 1588 aa23.23■■□□□ 1.31
PDZD2-212ENST00000515115 MROH2BQ7Z745 1585 aa23.23■■□□□ 1.31
PDZD2-212ENST00000515115 BAZ1BQ9UIG0 1483 aaKnown RBP23.17■■□□□ 1.3
PDZD2-212ENST00000515115 WIZO95785 1651 aa23■■□□□ 1.27
PDZD2-212ENST00000515115 RSF1Q96T23 1441 aaPredicted RBP22.99■■□□□ 1.27
PDZD2-212ENST00000515115 TOP2AP11388 1531 aaKnown RBP22.82■■□□□ 1.24
PDZD2-212ENST00000515115 LAMC3Q9Y6N6 1575 aa22.73■■□□□ 1.23
PDZD2-212ENST00000515115 ERCC6Q03468 1493 aa22.69■■□□□ 1.22
PDZD2-212ENST00000515115 NESP48681 1621 aa22.64■■□□□ 1.22
PDZD2-212ENST00000515115 CADPSQ9ULU8 1353 aa22.61■■□□□ 1.21
PDZD2-212ENST00000515115 PDS5BQ9NTI5 1447 aa22.58■■□□□ 1.21
PDZD2-212ENST00000515115 CCDC88BA6NC98 1476 aa22.49■■□□□ 1.19
PDZD2-212ENST00000515115 CFTRP13569 1480 aa22.48■■□□□ 1.19
PDZD2-212ENST00000515115 KIF21AQ7Z4S6 1674 aa22.45■■□□□ 1.18
PDZD2-212ENST00000515115 CUX2O14529 1486 aa22.44■■□□□ 1.18
PDZD2-212ENST00000515115 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
PDZD2-212ENST00000515115 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
PDZD2-212ENST00000515115 CEP164Q9UPV0 1460 aa22.38■■□□□ 1.17
PDZD2-212ENST00000515115 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
PDZD2-212ENST00000515115 FANCD2Q9BXW9 1451 aa22.37■■□□□ 1.17
PDZD2-212ENST00000515115 MRC2Q9UBG0 1479 aa22.32■■□□□ 1.16
PDZD2-212ENST00000515115 WDR62O43379 1518 aa22.24■■□□□ 1.15
PDZD2-212ENST00000515115 ABCC8Q09428 1581 aa22.09■■□□□ 1.13
PDZD2-212ENST00000515115 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
PDZD2-212ENST00000515115 DNMBPQ6XZF7 1577 aa22.02■■□□□ 1.12
PDZD2-212ENST00000515115 TOPBP1Q92547 1522 aa22■■□□□ 1.11
PDZD2-212ENST00000515115 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
PDZD2-212ENST00000515115 CUX1P39880 1505 aa21.81■■□□□ 1.08
PDZD2-212ENST00000515115 POLA1P09884 1462 aaPredicted RBP21.81■■□□□ 1.08
PDZD2-212ENST00000515115 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.07
PDZD2-212ENST00000515115 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
PDZD2-212ENST00000515115 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
PDZD2-212ENST00000515115 SOGA1O94964 1423 aa21.72■■□□□ 1.07
PDZD2-212ENST00000515115 WDR97A6NE52 1622 aa21.7■■□□□ 1.06
PDZD2-212ENST00000515115 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.06
PDZD2-212ENST00000515115 EIF4G3O43432 1585 aaKnown RBP21.7■■□□□ 1.06
PDZD2-212ENST00000515115 TOP2BQ02880 1626 aa21.69■■□□□ 1.06
PDZD2-212ENST00000515115 BIVM-ERCC5R4GMW8 1640 aa21.69■■□□□ 1.06
PDZD2-212ENST00000515115 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
PDZD2-212ENST00000515115 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
PDZD2-212ENST00000515115 DNAJC5Q9H3Z4 198 aa21.6■■□□□ 1.05
PDZD2-212ENST00000515115 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.05
PDZD2-212ENST00000515115 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.04
PDZD2-212ENST00000515115 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
PDZD2-212ENST00000515115 GRIN2BQ13224 1484 aa21.51■■□□□ 1.03
PDZD2-212ENST00000515115 GAPVD1Q14C86 1478 aa21.5■■□□□ 1.03
PDZD2-212ENST00000515115 ABCA5Q8WWZ7 1642 aa21.49■■□□□ 1.03
PDZD2-212ENST00000515115 PBRM1Q86U86 1689 aa21.47■■□□□ 1.03
PDZD2-212ENST00000515115 MAGI1Q96QZ7 1491 aaPredicted RBP21.47■■□□□ 1.03
PDZD2-212ENST00000515115 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
PDZD2-212ENST00000515115 SNAPC4Q5SXM2 1469 aa21.45■■□□□ 1.02
PDZD2-212ENST00000515115 CHD1O14646 1710 aa21.41■■□□□ 1.02
PDZD2-212ENST00000515115 FBLN2P98095 1184 aa21.38■■□□□ 1.01
PDZD2-212ENST00000515115 SYNJ2O15056 1496 aa21.37■■□□□ 1.01
PDZD2-212ENST00000515115 ERICH3Q5RHP9 1530 aa21.35■■□□□ 1.01
PDZD2-212ENST00000515115 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
PDZD2-212ENST00000515115 KIF27Q86VH2 1401 aa21.31■■□□□ 1
PDZD2-212ENST00000515115 ADAMTS12P58397 1594 aa21.3■■□□□ 1
PDZD2-212ENST00000515115 FHAD1B1AJZ9 1412 aa21.27■■□□□ 1
PDZD2-212ENST00000515115 TRIM41Q8WV44 630 aa21.24■□□□□ 0.99
PDZD2-212ENST00000515115 GRIN2AQ12879 1464 aa21.21■□□□□ 0.99
PDZD2-212ENST00000515115 CUL7Q14999 1698 aa21.21■□□□□ 0.99
PDZD2-212ENST00000515115 CLASP1Q7Z460 1538 aa21.16■□□□□ 0.98
PDZD2-212ENST00000515115 IGF1RP08069 1367 aa21.12■□□□□ 0.97
PDZD2-212ENST00000515115 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
PDZD2-212ENST00000515115 RIMBP3CA6NJZ7 1639 aa21.1■□□□□ 0.97
PDZD2-212ENST00000515115 RIMBP3BA6NNM3 1639 aa21.1■□□□□ 0.97
PDZD2-212ENST00000515115 RIMBP3Q9UFD9 1639 aa21.1■□□□□ 0.97
PDZD2-212ENST00000515115 NUP160Q12769 1436 aa21.1■□□□□ 0.97
PDZD2-212ENST00000515115 CEP170Q5SW79 1584 aa21.07■□□□□ 0.96
PDZD2-212ENST00000515115 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
PDZD2-212ENST00000515115 CARMIL1Q5VZK9 1371 aa21.04■□□□□ 0.96
PDZD2-212ENST00000515115 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
PDZD2-212ENST00000515115 EEA1Q15075 1411 aa20.97■□□□□ 0.95
PDZD2-212ENST00000515115 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
PDZD2-212ENST00000515115 SHROOM2Q13796 1616 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms