RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 NISCHQ9Y2I1 1504 aa38.69■■■■□ 3.78
PROM1-218ENST00000514967 CCDC180Q9P1Z9 1646 aa34.23■■■■□ 3.07
PROM1-218ENST00000514967 ABCC9O60706 1549 aa32.87■■■□□ 2.85
PROM1-218ENST00000514967 ZCCHC6Q5VYS8 1495 aaKnown RBP32.33■■■□□ 2.77
PROM1-218ENST00000514967 MYO15BQ96JP2 1530 aa32.2■■■□□ 2.74
PROM1-218ENST00000514967 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
PROM1-218ENST00000514967 NACADO15069 1562 aa32.11■■■□□ 2.73
PROM1-218ENST00000514967 RB1CC1Q8TDY2 1594 aa31.97■■■□□ 2.71
PROM1-218ENST00000514967 DCAF8L2P0C7V8 631 aa31.88■■■□□ 2.69
PROM1-218ENST00000514967 UNC13AQ9UPW8 1703 aa31.13■■■□□ 2.57
PROM1-218ENST00000514967 SCRIBQ14160 1630 aa31.07■■■□□ 2.56
PROM1-218ENST00000514967 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
PROM1-218ENST00000514967 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.53
PROM1-218ENST00000514967 PABPN1Q86U42 306 aaKnown RBP eCLIP30.75■■■□□ 2.51
PROM1-218ENST00000514967 EIF4G1Q04637 1599 aaKnown RBP30.09■■■□□ 2.41
PROM1-218ENST00000514967 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
PROM1-218ENST00000514967 BAZ1AQ9NRL2 1556 aaPredicted RBP29.96■■■□□ 2.39
PROM1-218ENST00000514967 SMARCA4P51532 1647 aa29.88■■■□□ 2.37
PROM1-218ENST00000514967 CC2D2AQ9P2K1 1620 aa29.82■■■□□ 2.36
PROM1-218ENST00000514967 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
PROM1-218ENST00000514967 MROH2BQ7Z745 1585 aa29.74■■■□□ 2.35
PROM1-218ENST00000514967 PEG3Q9GZU2 1588 aa29.71■■■□□ 2.35
PROM1-218ENST00000514967 SMARCA2P51531 1590 aa29.66■■■□□ 2.34
PROM1-218ENST00000514967 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.34
PROM1-218ENST00000514967 NCAPD3P42695 1498 aa29.63■■■□□ 2.33
PROM1-218ENST00000514967 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
PROM1-218ENST00000514967 HMGXB3Q12766 1538 aa29.51■■■□□ 2.32
PROM1-218ENST00000514967 WIZO95785 1651 aa29.39■■■□□ 2.3
PROM1-218ENST00000514967 BAZ1BQ9UIG0 1483 aaKnown RBP29.38■■■□□ 2.29
PROM1-218ENST00000514967 TOP2AP11388 1531 aaKnown RBP29.21■■■□□ 2.27
PROM1-218ENST00000514967 SUPT5HO00267 1087 aaKnown RBP29.01■■■□□ 2.23
PROM1-218ENST00000514967 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
PROM1-218ENST00000514967 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
PROM1-218ENST00000514967 LAMC3Q9Y6N6 1575 aa28.74■■■□□ 2.19
PROM1-218ENST00000514967 CFTRP13569 1480 aa28.69■■■□□ 2.18
PROM1-218ENST00000514967 NESP48681 1621 aa28.58■■■□□ 2.17
PROM1-218ENST00000514967 PDS5BQ9NTI5 1447 aa28.52■■■□□ 2.16
PROM1-218ENST00000514967 PRDM2Q13029 1718 aa28.43■■■□□ 2.14
PROM1-218ENST00000514967 FANCD2Q9BXW9 1451 aa28.35■■■□□ 2.13
PROM1-218ENST00000514967 ERCC6Q03468 1493 aa28.33■■■□□ 2.13
PROM1-218ENST00000514967 CEP164Q9UPV0 1460 aa28.27■■■□□ 2.12
PROM1-218ENST00000514967 KIF21AQ7Z4S6 1674 aa28.26■■■□□ 2.12
PROM1-218ENST00000514967 MRC2Q9UBG0 1479 aa28.16■■■□□ 2.1
PROM1-218ENST00000514967 THOC2Q8NI27 1593 aaKnown RBP28.13■■■□□ 2.09
PROM1-218ENST00000514967 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
PROM1-218ENST00000514967 WDR62O43379 1518 aa28.08■■■□□ 2.08
PROM1-218ENST00000514967 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
PROM1-218ENST00000514967 CUX2O14529 1486 aa28.02■■■□□ 2.08
PROM1-218ENST00000514967 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
PROM1-218ENST00000514967 TOPBP1Q92547 1522 aa27.95■■■□□ 2.06
PROM1-218ENST00000514967 WRNQ14191 1432 aaPredicted RBP eCLIP27.91■■■□□ 2.06
PROM1-218ENST00000514967 CUX1P39880 1505 aa27.88■■■□□ 2.05
PROM1-218ENST00000514967 TOP2BQ02880 1626 aa27.81■■■□□ 2.04
PROM1-218ENST00000514967 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
PROM1-218ENST00000514967 POLA1P09884 1462 aaPredicted RBP27.75■■■□□ 2.03
PROM1-218ENST00000514967 SYNJ1O43426 1573 aa27.74■■■□□ 2.03
PROM1-218ENST00000514967 IFT140Q96RY7 1462 aa27.72■■■□□ 2.03
PROM1-218ENST00000514967 FGD5Q6ZNL6 1462 aa27.71■■■□□ 2.03
PROM1-218ENST00000514967 SOGA1O94964 1423 aa27.64■■■□□ 2.02
PROM1-218ENST00000514967 TARBP1Q13395 1621 aaKnown RBP27.63■■■□□ 2.01
PROM1-218ENST00000514967 WDR97A6NE52 1622 aa27.58■■■□□ 2.01
PROM1-218ENST00000514967 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
PROM1-218ENST00000514967 RAD54L2Q9Y4B4 1467 aa27.54■■■□□ 2
PROM1-218ENST00000514967 TRIM41Q8WV44 630 aa27.49■■□□□ 1.99
PROM1-218ENST00000514967 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
PROM1-218ENST00000514967 ZNF608Q9ULD9 1512 aaPredicted RBP27.43■■□□□ 1.98
PROM1-218ENST00000514967 TDRD9Q8NDG6 1382 aaKnown RBP27.36■■□□□ 1.97
PROM1-218ENST00000514967 EIF4G3O43432 1585 aaKnown RBP27.36■■□□□ 1.97
PROM1-218ENST00000514967 ABCA5Q8WWZ7 1642 aa27.36■■□□□ 1.97
PROM1-218ENST00000514967 AQRO60306 1485 aaKnown RBP eCLIP27.34■■□□□ 1.97
PROM1-218ENST00000514967 GAPVD1Q14C86 1478 aa27.33■■□□□ 1.97
PROM1-218ENST00000514967 KIF27Q86VH2 1401 aa27.31■■□□□ 1.96
PROM1-218ENST00000514967 GRIN2BQ13224 1484 aa27.3■■□□□ 1.96
PROM1-218ENST00000514967 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
PROM1-218ENST00000514967 MAGI1Q96QZ7 1491 aaPredicted RBP27.21■■□□□ 1.95
PROM1-218ENST00000514967 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
PROM1-218ENST00000514967 EEA1Q15075 1411 aa27.17■■□□□ 1.94
PROM1-218ENST00000514967 IGF1RP08069 1367 aa27.16■■□□□ 1.94
PROM1-218ENST00000514967 SNAPC4Q5SXM2 1469 aa27.11■■□□□ 1.93
PROM1-218ENST00000514967 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
PROM1-218ENST00000514967 SYNJ2O15056 1496 aa27.07■■□□□ 1.92
PROM1-218ENST00000514967 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
PROM1-218ENST00000514967 CUL7Q14999 1698 aa27.05■■□□□ 1.92
PROM1-218ENST00000514967 ADAMTS12P58397 1594 aa27.04■■□□□ 1.92
PROM1-218ENST00000514967 CARMIL1Q5VZK9 1371 aa26.98■■□□□ 1.91
PROM1-218ENST00000514967 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
PROM1-218ENST00000514967 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
PROM1-218ENST00000514967 PRXQ9BXM0 1461 aa26.93■■□□□ 1.9
PROM1-218ENST00000514967 GRIN2AQ12879 1464 aa26.92■■□□□ 1.9
PROM1-218ENST00000514967 OSCARQ8IYS5 282 aa26.89■■□□□ 1.9
PROM1-218ENST00000514967 CHD1O14646 1710 aa26.89■■□□□ 1.9
PROM1-218ENST00000514967 RAPGEF2Q9Y4G8 1499 aa26.87■■□□□ 1.89
PROM1-218ENST00000514967 NUP160Q12769 1436 aa26.84■■□□□ 1.89
PROM1-218ENST00000514967 FBLN2P98095 1184 aa26.84■■□□□ 1.89
PROM1-218ENST00000514967 KIF21BO75037 1637 aa26.77■■□□□ 1.88
PROM1-218ENST00000514967 FAM9AQ8IZU1 332 aaPredicted RBP26.73■■□□□ 1.87
PROM1-218ENST00000514967 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
PROM1-218ENST00000514967 CEP170Q5SW79 1584 aa26.72■■□□□ 1.87
PROM1-218ENST00000514967 KIAA0586Q9BVV6 1533 aa26.7■■□□□ 1.86
PROM1-218ENST00000514967 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms