RNA–Protein interactions for RNA: ENST00000514775.1

ATG12-213, Transcript of autophagy related 12, humanhuman

TSL 4

Gene ATG12, Length 553 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG12-213ENST00000514775 NISCHQ9Y2I1 1504 aa20.73■□□□□ 0.91
ATG12-213ENST00000514775 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
ATG12-213ENST00000514775 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
ATG12-213ENST00000514775 CCDC180Q9P1Z9 1646 aa18.4■□□□□ 0.54
ATG12-213ENST00000514775 ABCC9O60706 1549 aa18■□□□□ 0.47
ATG12-213ENST00000514775 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
ATG12-213ENST00000514775 RB1CC1Q8TDY2 1594 aa17.34■□□□□ 0.37
ATG12-213ENST00000514775 NACADO15069 1562 aa17.32■□□□□ 0.36
ATG12-213ENST00000514775 ZCCHC6Q5VYS8 1495 aaKnown RBP17.26■□□□□ 0.35
ATG12-213ENST00000514775 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.34
ATG12-213ENST00000514775 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
ATG12-213ENST00000514775 UNC13AQ9UPW8 1703 aa16.85■□□□□ 0.29
ATG12-213ENST00000514775 PABPN1Q86U42 306 aaKnown RBP eCLIP16.85■□□□□ 0.29
ATG12-213ENST00000514775 SENP3Q9H4L4 574 aaPredicted RBP16.83■□□□□ 0.28
ATG12-213ENST00000514775 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
ATG12-213ENST00000514775 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
ATG12-213ENST00000514775 SHROOM4Q9ULL8 1493 aa16.64■□□□□ 0.25
ATG12-213ENST00000514775 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
ATG12-213ENST00000514775 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
ATG12-213ENST00000514775 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
ATG12-213ENST00000514775 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
ATG12-213ENST00000514775 CECR2Q9BXF3 1484 aa16.18■□□□□ 0.18
ATG12-213ENST00000514775 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
ATG12-213ENST00000514775 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
ATG12-213ENST00000514775 SMARCA2P51531 1590 aa16■□□□□ 0.15
ATG12-213ENST00000514775 ATAD2BQ9ULI0 1458 aa15.98■□□□□ 0.15
ATG12-213ENST00000514775 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
ATG12-213ENST00000514775 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
ATG12-213ENST00000514775 BAZ1BQ9UIG0 1483 aaKnown RBP15.9■□□□□ 0.14
ATG12-213ENST00000514775 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
ATG12-213ENST00000514775 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
ATG12-213ENST00000514775 RSF1Q96T23 1441 aaPredicted RBP15.81■□□□□ 0.12
ATG12-213ENST00000514775 WIZO95785 1651 aa15.79■□□□□ 0.12
ATG12-213ENST00000514775 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
ATG12-213ENST00000514775 FOXD1Q16676 465 aa15.59■□□□□ 0.09
ATG12-213ENST00000514775 ERCC6Q03468 1493 aa15.58■□□□□ 0.08
ATG12-213ENST00000514775 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
ATG12-213ENST00000514775 NESP48681 1621 aa15.55■□□□□ 0.08
ATG12-213ENST00000514775 CADPSQ9ULU8 1353 aa15.53■□□□□ 0.08
ATG12-213ENST00000514775 SUPT5HO00267 1087 aaKnown RBP15.53■□□□□ 0.08
ATG12-213ENST00000514775 PDS5BQ9NTI5 1447 aa15.5■□□□□ 0.07
ATG12-213ENST00000514775 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.07
ATG12-213ENST00000514775 CFTRP13569 1480 aa15.42■□□□□ 0.06
ATG12-213ENST00000514775 KIF21AQ7Z4S6 1674 aa15.36■□□□□ 0.05
ATG12-213ENST00000514775 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
ATG12-213ENST00000514775 CUX2O14529 1486 aa15.34■□□□□ 0.05
ATG12-213ENST00000514775 CEP164Q9UPV0 1460 aa15.34■□□□□ 0.05
ATG12-213ENST00000514775 MRC2Q9UBG0 1479 aa15.3■□□□□ 0.04
ATG12-213ENST00000514775 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
ATG12-213ENST00000514775 PRDM2Q13029 1718 aa15.28■□□□□ 0.04
ATG12-213ENST00000514775 WDR62O43379 1518 aa15.22■□□□□ 0.03
ATG12-213ENST00000514775 URB2Q14146 1524 aaKnown RBP15.16■□□□□ 0.02
ATG12-213ENST00000514775 ABCC8Q09428 1581 aa15.15■□□□□ 0.02
ATG12-213ENST00000514775 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
ATG12-213ENST00000514775 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
ATG12-213ENST00000514775 IFT140Q96RY7 1462 aa15.01□□□□□ -0.01
ATG12-213ENST00000514775 CUX1P39880 1505 aa14.97□□□□□ -0.01
ATG12-213ENST00000514775 POLA1P09884 1462 aaPredicted RBP14.96□□□□□ -0.01
ATG12-213ENST00000514775 SOGA1O94964 1423 aa14.95□□□□□ -0.02
ATG12-213ENST00000514775 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
ATG12-213ENST00000514775 WRNQ14191 1432 aaPredicted RBP eCLIP14.94□□□□□ -0.02
ATG12-213ENST00000514775 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
ATG12-213ENST00000514775 RAD54L2Q9Y4B4 1467 aa14.89□□□□□ -0.03
ATG12-213ENST00000514775 PLPPR3Q6T4P5 718 aa14.89□□□□□ -0.03
ATG12-213ENST00000514775 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
ATG12-213ENST00000514775 TOP2BQ02880 1626 aa14.87□□□□□ -0.03
ATG12-213ENST00000514775 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
ATG12-213ENST00000514775 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
ATG12-213ENST00000514775 AQRO60306 1485 aaKnown RBP eCLIP14.85□□□□□ -0.035e-8■□□□□ 8.9
ATG12-213ENST00000514775 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
ATG12-213ENST00000514775 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
ATG12-213ENST00000514775 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.04
ATG12-213ENST00000514775 WDR97A6NE52 1622 aa14.82□□□□□ -0.04
ATG12-213ENST00000514775 ABCA10Q8WWZ4 1543 aa14.8□□□□□ -0.04
ATG12-213ENST00000514775 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
ATG12-213ENST00000514775 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
ATG12-213ENST00000514775 GAPVD1Q14C86 1478 aa14.76□□□□□ -0.05
ATG12-213ENST00000514775 FBLN2P98095 1184 aa14.75□□□□□ -0.05
ATG12-213ENST00000514775 MSH5O43196 834 aa14.74□□□□□ -0.05
ATG12-213ENST00000514775 SNAPC4Q5SXM2 1469 aa14.72□□□□□ -0.05
ATG12-213ENST00000514775 MAGI1Q96QZ7 1491 aaPredicted RBP14.71□□□□□ -0.05
ATG12-213ENST00000514775 CHMP7Q8WUX9 453 aaPredicted RBP14.71□□□□□ -0.05
ATG12-213ENST00000514775 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
ATG12-213ENST00000514775 TRIM41Q8WV44 630 aa14.69□□□□□ -0.06
ATG12-213ENST00000514775 PBRM1Q86U86 1689 aa14.68□□□□□ -0.06
ATG12-213ENST00000514775 KIF27Q86VH2 1401 aa14.66□□□□□ -0.06
ATG12-213ENST00000514775 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
ATG12-213ENST00000514775 CHD1O14646 1710 aa14.64□□□□□ -0.07
ATG12-213ENST00000514775 ERICH3Q5RHP9 1530 aa14.63□□□□□ -0.07
ATG12-213ENST00000514775 PIAS4Q8N2W9 510 aaPredicted RBP14.62□□□□□ -0.07
ATG12-213ENST00000514775 FHAD1B1AJZ9 1412 aa14.6□□□□□ -0.07
ATG12-213ENST00000514775 ADAMTS12P58397 1594 aa14.58□□□□□ -0.08
ATG12-213ENST00000514775 GRIN2AQ12879 1464 aa14.55□□□□□ -0.08
ATG12-213ENST00000514775 IGF1RP08069 1367 aa14.54□□□□□ -0.08
ATG12-213ENST00000514775 CUL7Q14999 1698 aa14.52□□□□□ -0.09
ATG12-213ENST00000514775 CARMIL1Q5VZK9 1371 aa14.49□□□□□ -0.09
ATG12-213ENST00000514775 CLASP1Q7Z460 1538 aa14.48□□□□□ -0.09
ATG12-213ENST00000514775 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
ATG12-213ENST00000514775 NUP160Q12769 1436 aa14.47□□□□□ -0.09
ATG12-213ENST00000514775 ADRA2BP18089 450 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms