RNA–Protein interactions for RNA: ENST00000514585.5

SEPSECS-206, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-206ENST00000514585 NISCHQ9Y2I1 1504 aa44.97■■■■■ 4.79
SEPSECS-206ENST00000514585 CCDC180Q9P1Z9 1646 aa39.89■■■■□ 3.98
SEPSECS-206ENST00000514585 ABCC9O60706 1549 aa38.84■■■■□ 3.81
SEPSECS-206ENST00000514585 DCAF8L2P0C7V8 631 aa37.6■■■■□ 3.61
SEPSECS-206ENST00000514585 ZCCHC6Q5VYS8 1495 aaKnown RBP37.5■■■■□ 3.59
SEPSECS-206ENST00000514585 RB1CC1Q8TDY2 1594 aa37.45■■■■□ 3.59
SEPSECS-206ENST00000514585 NACADO15069 1562 aa37.44■■■■□ 3.58
SEPSECS-206ENST00000514585 MYO15BQ96JP2 1530 aa37.26■■■■□ 3.55
SEPSECS-206ENST00000514585 DCAF1Q9Y4B6 1507 aa37.19■■■■□ 3.54
SEPSECS-206ENST00000514585 UNC13AQ9UPW8 1703 aa36.62■■■■□ 3.45
SEPSECS-206ENST00000514585 SCRIBQ14160 1630 aa36.45■■■■□ 3.43
SEPSECS-206ENST00000514585 PABPN1Q86U42 306 aaKnown RBP eCLIP36.36■■■■□ 3.41
SEPSECS-206ENST00000514585 BICRAQ9NZM4 1560 aa36.28■■■■□ 3.4
SEPSECS-206ENST00000514585 SHROOM4Q9ULL8 1493 aa35.9■■■■□ 3.34
SEPSECS-206ENST00000514585 DNAJC5BQ9UF47 199 aa35.41■■■■□ 3.26
SEPSECS-206ENST00000514585 EIF4G1Q04637 1599 aaKnown RBP35.32■■■■□ 3.25
SEPSECS-206ENST00000514585 CC2D2AQ9P2K1 1620 aa35.14■■■■□ 3.22
SEPSECS-206ENST00000514585 CECR2Q9BXF3 1484 aa35.01■■■■□ 3.2
SEPSECS-206ENST00000514585 SMARCA4P51532 1647 aa34.86■■■■□ 3.17
SEPSECS-206ENST00000514585 BAZ1AQ9NRL2 1556 aaPredicted RBP34.85■■■■□ 3.17
SEPSECS-206ENST00000514585 MROH2BQ7Z745 1585 aa34.67■■■■□ 3.14
SEPSECS-206ENST00000514585 ATAD2BQ9ULI0 1458 aa34.6■■■■□ 3.13
SEPSECS-206ENST00000514585 SMARCA2P51531 1590 aa34.59■■■■□ 3.13
SEPSECS-206ENST00000514585 NCAPD3P42695 1498 aa34.54■■■■□ 3.12
SEPSECS-206ENST00000514585 PEG3Q9GZU2 1588 aa34.48■■■■□ 3.11
SEPSECS-206ENST00000514585 HMGXB3Q12766 1538 aa34.39■■■■□ 3.1
SEPSECS-206ENST00000514585 BAZ1BQ9UIG0 1483 aaKnown RBP34.36■■■■□ 3.09
SEPSECS-206ENST00000514585 RSF1Q96T23 1441 aaPredicted RBP34.36■■■■□ 3.09
SEPSECS-206ENST00000514585 WIZO95785 1651 aa34.34■■■■□ 3.09
SEPSECS-206ENST00000514585 TOP2AP11388 1531 aaKnown RBP33.96■■■■□ 3.03
SEPSECS-206ENST00000514585 SUPT5HO00267 1087 aaKnown RBP33.75■■■□□ 2.99
SEPSECS-206ENST00000514585 NESP48681 1621 aa33.67■■■□□ 2.98
SEPSECS-206ENST00000514585 LAMC3Q9Y6N6 1575 aa33.62■■■□□ 2.97
SEPSECS-206ENST00000514585 CCDC88BA6NC98 1476 aa33.56■■■□□ 2.96
SEPSECS-206ENST00000514585 CADPSQ9ULU8 1353 aa33.56■■■□□ 2.96
SEPSECS-206ENST00000514585 ERCC6Q03468 1493 aa33.48■■■□□ 2.95
SEPSECS-206ENST00000514585 CFTRP13569 1480 aa33.4■■■□□ 2.94
SEPSECS-206ENST00000514585 PDS5BQ9NTI5 1447 aa33.39■■■□□ 2.94
SEPSECS-206ENST00000514585 KIF21AQ7Z4S6 1674 aa33.3■■■□□ 2.92
SEPSECS-206ENST00000514585 PRDM2Q13029 1718 aa33.21■■■□□ 2.91
SEPSECS-206ENST00000514585 FANCD2Q9BXW9 1451 aa33.19■■■□□ 2.9
SEPSECS-206ENST00000514585 CEP164Q9UPV0 1460 aa33.14■■■□□ 2.9
SEPSECS-206ENST00000514585 THOC2Q8NI27 1593 aaKnown RBP33.08■■■□□ 2.89
SEPSECS-206ENST00000514585 MRC2Q9UBG0 1479 aa33.03■■■□□ 2.88
SEPSECS-206ENST00000514585 CUX2O14529 1486 aa33■■■□□ 2.87
SEPSECS-206ENST00000514585 WDR62O43379 1518 aa32.89■■■□□ 2.86
SEPSECS-206ENST00000514585 URB2Q14146 1524 aaKnown RBP32.83■■■□□ 2.85
SEPSECS-206ENST00000514585 ABCC8Q09428 1581 aa32.69■■■□□ 2.82
SEPSECS-206ENST00000514585 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
SEPSECS-206ENST00000514585 DNMBPQ6XZF7 1577 aa32.66■■■□□ 2.82
SEPSECS-206ENST00000514585 CUX1P39880 1505 aa32.51■■■□□ 2.8
SEPSECS-206ENST00000514585 POLA1P09884 1462 aaPredicted RBP32.41■■■□□ 2.78
SEPSECS-206ENST00000514585 IFT140Q96RY7 1462 aa32.41■■■□□ 2.78
SEPSECS-206ENST00000514585 WRNQ14191 1432 aaPredicted RBP eCLIP32.41■■■□□ 2.78
SEPSECS-206ENST00000514585 FGD5Q6ZNL6 1462 aa32.38■■■□□ 2.77
SEPSECS-206ENST00000514585 SYNJ1O43426 1573 aa32.31■■■□□ 2.76
SEPSECS-206ENST00000514585 SOGA1O94964 1423 aa32.31■■■□□ 2.76
SEPSECS-206ENST00000514585 TOP2BQ02880 1626 aa32.3■■■□□ 2.76
SEPSECS-206ENST00000514585 TARBP1Q13395 1621 aaKnown RBP32.3■■■□□ 2.76
SEPSECS-206ENST00000514585 BIVM-ERCC5R4GMW8 1640 aa32.3■■■□□ 2.76
SEPSECS-206ENST00000514585 RAD54L2Q9Y4B4 1467 aa32.29■■■□□ 2.76
SEPSECS-206ENST00000514585 ZNF608Q9ULD9 1512 aaPredicted RBP32.25■■■□□ 2.75
SEPSECS-206ENST00000514585 EIF4G3O43432 1585 aaKnown RBP32.15■■■□□ 2.74
SEPSECS-206ENST00000514585 AQRO60306 1485 aaKnown RBP eCLIP32.11■■■□□ 2.73
SEPSECS-206ENST00000514585 TDRD9Q8NDG6 1382 aaKnown RBP32.09■■■□□ 2.73
SEPSECS-206ENST00000514585 WDR97A6NE52 1622 aa32.09■■■□□ 2.73
SEPSECS-206ENST00000514585 ABCA10Q8WWZ4 1543 aa32.06■■■□□ 2.72
SEPSECS-206ENST00000514585 GAPVD1Q14C86 1478 aa31.94■■■□□ 2.7
SEPSECS-206ENST00000514585 ABCA5Q8WWZ7 1642 aa31.91■■■□□ 2.7
SEPSECS-206ENST00000514585 GRIN2BQ13224 1484 aa31.89■■■□□ 2.7
SEPSECS-206ENST00000514585 PBRM1Q86U86 1689 aa31.87■■■□□ 2.69
SEPSECS-206ENST00000514585 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
SEPSECS-206ENST00000514585 SNAPC4Q5SXM2 1469 aa31.82■■■□□ 2.68
SEPSECS-206ENST00000514585 MAGI1Q96QZ7 1491 aaPredicted RBP31.77■■■□□ 2.68
SEPSECS-206ENST00000514585 FBLN2P98095 1184 aa31.75■■■□□ 2.67
SEPSECS-206ENST00000514585 DNAJC5Q9H3Z4 198 aa31.72■■■□□ 2.67
SEPSECS-206ENST00000514585 CHD1O14646 1710 aa31.72■■■□□ 2.67
SEPSECS-206ENST00000514585 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
SEPSECS-206ENST00000514585 OSCARQ8IYS5 282 aa31.72■■■□□ 2.67
SEPSECS-206ENST00000514585 ERICH3Q5RHP9 1530 aa31.69■■■□□ 2.66
SEPSECS-206ENST00000514585 CHMP7Q8WUX9 453 aaPredicted RBP31.67■■■□□ 2.66
SEPSECS-206ENST00000514585 SYNJ2O15056 1496 aa31.65■■■□□ 2.66
SEPSECS-206ENST00000514585 ADAMTS12P58397 1594 aa31.6■■■□□ 2.65
SEPSECS-206ENST00000514585 CHIC1Q5VXU3 224 aa31.58■■■□□ 2.65
SEPSECS-206ENST00000514585 FHAD1B1AJZ9 1412 aa31.56■■■□□ 2.64
SEPSECS-206ENST00000514585 IGF1RP08069 1367 aa31.53■■■□□ 2.64
SEPSECS-206ENST00000514585 RUSC2Q8N2Y8 1516 aa31.5■■■□□ 2.63
SEPSECS-206ENST00000514585 GRIN2AQ12879 1464 aa31.48■■■□□ 2.63
SEPSECS-206ENST00000514585 CUL7Q14999 1698 aa31.46■■■□□ 2.63
SEPSECS-206ENST00000514585 CARMIL1Q5VZK9 1371 aa31.38■■■□□ 2.61
SEPSECS-206ENST00000514585 CLASP1Q7Z460 1538 aa31.33■■■□□ 2.61
SEPSECS-206ENST00000514585 NUP160Q12769 1436 aa31.31■■■□□ 2.6
SEPSECS-206ENST00000514585 CEP170Q5SW79 1584 aa31.31■■■□□ 2.6
SEPSECS-206ENST00000514585 EEA1Q15075 1411 aa31.25■■■□□ 2.59
SEPSECS-206ENST00000514585 RAPGEF2Q9Y4G8 1499 aa31.22■■■□□ 2.59
SEPSECS-206ENST00000514585 FAM9AQ8IZU1 332 aaPredicted RBP31.21■■■□□ 2.59
SEPSECS-206ENST00000514585 CSRNP3Q8WYN3 585 aa31.21■■■□□ 2.59
SEPSECS-206ENST00000514585 ARHGEF11O15085 1522 aa31.17■■■□□ 2.58
SEPSECS-206ENST00000514585 RIMBP3CA6NJZ7 1639 aa31.16■■■□□ 2.58
SEPSECS-206ENST00000514585 RIMBP3BA6NNM3 1639 aa31.16■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 201 ms