RNA–Protein interactions for RNA: ENST00000514467.5

SNCAIP-219, Transcript of synuclein alpha interacting protein, humanhuman

TSL 3

Gene SNCAIP, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-219ENST00000514467 NISCHQ9Y2I1 1504 aa31.96■■■□□ 2.71
SNCAIP-219ENST00000514467 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
SNCAIP-219ENST00000514467 ABCC9O60706 1549 aa27.26■■□□□ 1.95
SNCAIP-219ENST00000514467 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
SNCAIP-219ENST00000514467 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
SNCAIP-219ENST00000514467 NACADO15069 1562 aa26.46■■□□□ 1.83
SNCAIP-219ENST00000514467 DCAF1Q9Y4B6 1507 aa26.45■■□□□ 1.83
SNCAIP-219ENST00000514467 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
SNCAIP-219ENST00000514467 MYO15BQ96JP2 1530 aa26.4■■□□□ 1.82
SNCAIP-219ENST00000514467 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
SNCAIP-219ENST00000514467 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
SNCAIP-219ENST00000514467 BICRAQ9NZM4 1560 aa25.62■■□□□ 1.69
SNCAIP-219ENST00000514467 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
SNCAIP-219ENST00000514467 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
SNCAIP-219ENST00000514467 EIF4G1Q04637 1599 aaKnown RBP24.9■■□□□ 1.58
SNCAIP-219ENST00000514467 CECR2Q9BXF3 1484 aa24.85■■□□□ 1.57
SNCAIP-219ENST00000514467 SMARCA4P51532 1647 aa24.77■■□□□ 1.56
SNCAIP-219ENST00000514467 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
SNCAIP-219ENST00000514467 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
SNCAIP-219ENST00000514467 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
SNCAIP-219ENST00000514467 DNAJC5BQ9UF47 199 aa24.59■■□□□ 1.53
SNCAIP-219ENST00000514467 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
SNCAIP-219ENST00000514467 SMARCA2P51531 1590 aa24.48■■□□□ 1.51
SNCAIP-219ENST00000514467 WIZO95785 1651 aa24.47■■□□□ 1.51
SNCAIP-219ENST00000514467 RSF1Q96T23 1441 aaPredicted RBP24.47■■□□□ 1.51
SNCAIP-219ENST00000514467 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
SNCAIP-219ENST00000514467 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
SNCAIP-219ENST00000514467 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
SNCAIP-219ENST00000514467 BAZ1BQ9UIG0 1483 aaKnown RBP24.31■■□□□ 1.48
SNCAIP-219ENST00000514467 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
SNCAIP-219ENST00000514467 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
SNCAIP-219ENST00000514467 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
SNCAIP-219ENST00000514467 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
SNCAIP-219ENST00000514467 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
SNCAIP-219ENST00000514467 NESP48681 1621 aa23.72■■□□□ 1.39
SNCAIP-219ENST00000514467 PRDM2Q13029 1718 aa23.69■■□□□ 1.38
SNCAIP-219ENST00000514467 CADPSQ9ULU8 1353 aa23.66■■□□□ 1.38
SNCAIP-219ENST00000514467 CFTRP13569 1480 aa23.63■■□□□ 1.37
SNCAIP-219ENST00000514467 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
SNCAIP-219ENST00000514467 PDS5BQ9NTI5 1447 aa23.49■■□□□ 1.35
SNCAIP-219ENST00000514467 ERCC6Q03468 1493 aa23.45■■□□□ 1.34
SNCAIP-219ENST00000514467 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
SNCAIP-219ENST00000514467 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
SNCAIP-219ENST00000514467 THOC2Q8NI27 1593 aaKnown RBP23.33■■□□□ 1.33
SNCAIP-219ENST00000514467 MRC2Q9UBG0 1479 aa23.26■■□□□ 1.31
SNCAIP-219ENST00000514467 WDR62O43379 1518 aa23.2■■□□□ 1.3
SNCAIP-219ENST00000514467 URB2Q14146 1524 aaKnown RBP23.2■■□□□ 1.3
SNCAIP-219ENST00000514467 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
SNCAIP-219ENST00000514467 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
SNCAIP-219ENST00000514467 TOPBP1Q92547 1522 aa23.13■■□□□ 1.29
SNCAIP-219ENST00000514467 CUX1P39880 1505 aa23.12■■□□□ 1.29
SNCAIP-219ENST00000514467 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.28
SNCAIP-219ENST00000514467 SYNJ1O43426 1573 aa23.07■■□□□ 1.28
SNCAIP-219ENST00000514467 WRNQ14191 1432 aaPredicted RBP eCLIP23.07■■□□□ 1.28
SNCAIP-219ENST00000514467 CUX2O14529 1486 aa23.05■■□□□ 1.28
SNCAIP-219ENST00000514467 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
SNCAIP-219ENST00000514467 FGD5Q6ZNL6 1462 aa22.96■■□□□ 1.27
SNCAIP-219ENST00000514467 POLA1P09884 1462 aaPredicted RBP22.95■■□□□ 1.26
SNCAIP-219ENST00000514467 TARBP1Q13395 1621 aaKnown RBP22.88■■□□□ 1.25
SNCAIP-219ENST00000514467 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
SNCAIP-219ENST00000514467 IFT140Q96RY7 1462 aa22.85■■□□□ 1.25
SNCAIP-219ENST00000514467 RAD54L2Q9Y4B4 1467 aa22.85■■□□□ 1.25
SNCAIP-219ENST00000514467 SOGA1O94964 1423 aa22.82■■□□□ 1.24
SNCAIP-219ENST00000514467 TRIM41Q8WV44 630 aa22.75■■□□□ 1.23
SNCAIP-219ENST00000514467 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
SNCAIP-219ENST00000514467 ZNF608Q9ULD9 1512 aaPredicted RBP22.74■■□□□ 1.23
SNCAIP-219ENST00000514467 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
SNCAIP-219ENST00000514467 EIF4G3O43432 1585 aaKnown RBP22.74■■□□□ 1.23
SNCAIP-219ENST00000514467 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
SNCAIP-219ENST00000514467 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
SNCAIP-219ENST00000514467 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.21
SNCAIP-219ENST00000514467 TDRD9Q8NDG6 1382 aaKnown RBP22.63■■□□□ 1.21
SNCAIP-219ENST00000514467 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
SNCAIP-219ENST00000514467 KIF27Q86VH2 1401 aa22.55■■□□□ 1.2
SNCAIP-219ENST00000514467 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
SNCAIP-219ENST00000514467 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
SNCAIP-219ENST00000514467 ERICH3Q5RHP9 1530 aa22.49■■□□□ 1.19
SNCAIP-219ENST00000514467 SNAPC4Q5SXM2 1469 aa22.47■■□□□ 1.19
SNCAIP-219ENST00000514467 ADAMTS12P58397 1594 aa22.44■■□□□ 1.18
SNCAIP-219ENST00000514467 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
SNCAIP-219ENST00000514467 CHD1O14646 1710 aa22.43■■□□□ 1.18
SNCAIP-219ENST00000514467 CUL7Q14999 1698 aa22.42■■□□□ 1.18
SNCAIP-219ENST00000514467 EEA1Q15075 1411 aa22.38■■□□□ 1.17
SNCAIP-219ENST00000514467 IGF1RP08069 1367 aa22.38■■□□□ 1.17
SNCAIP-219ENST00000514467 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
SNCAIP-219ENST00000514467 FHAD1B1AJZ9 1412 aa22.32■■□□□ 1.16
SNCAIP-219ENST00000514467 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
SNCAIP-219ENST00000514467 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
SNCAIP-219ENST00000514467 GRIN2AQ12879 1464 aa22.26■■□□□ 1.15
SNCAIP-219ENST00000514467 FBLN2P98095 1184 aa22.25■■□□□ 1.15
SNCAIP-219ENST00000514467 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
SNCAIP-219ENST00000514467 CHMP7Q8WUX9 453 aaPredicted RBP22.24■■□□□ 1.15
SNCAIP-219ENST00000514467 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
SNCAIP-219ENST00000514467 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
SNCAIP-219ENST00000514467 KIF21BO75037 1637 aa22.2■■□□□ 1.14
SNCAIP-219ENST00000514467 CEP170Q5SW79 1584 aa22.17■■□□□ 1.14
SNCAIP-219ENST00000514467 CTTNBP2Q8WZ74 1663 aa22.13■■□□□ 1.13
SNCAIP-219ENST00000514467 NUP160Q12769 1436 aa22.13■■□□□ 1.13
SNCAIP-219ENST00000514467 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
SNCAIP-219ENST00000514467 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 336.3 ms