RNA–Protein interactions for RNA: ENST00000513719.1

SNCAIP-218, Transcript of synuclein alpha interacting protein, humanhuman

TSL 2

Gene SNCAIP, Length 2,303 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-218ENST00000513719 NISCHQ9Y2I1 1504 aa29.22■■■□□ 2.27
SNCAIP-218ENST00000513719 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
SNCAIP-218ENST00000513719 ZCCHC6Q5VYS8 1495 aaKnown RBP24.59■■□□□ 1.53
SNCAIP-218ENST00000513719 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
SNCAIP-218ENST00000513719 DCAF8L2P0C7V8 631 aa24.18■■□□□ 1.46
SNCAIP-218ENST00000513719 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
SNCAIP-218ENST00000513719 ABCC9O60706 1549 aa23.81■■□□□ 1.4
SNCAIP-218ENST00000513719 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
SNCAIP-218ENST00000513719 NACADO15069 1562 aa23.46■■□□□ 1.35
SNCAIP-218ENST00000513719 SUPT5HO00267 1087 aaKnown RBP23.38■■□□□ 1.33
SNCAIP-218ENST00000513719 SCRIBQ14160 1630 aa23.38■■□□□ 1.33
SNCAIP-218ENST00000513719 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
SNCAIP-218ENST00000513719 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
SNCAIP-218ENST00000513719 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
SNCAIP-218ENST00000513719 CECR2Q9BXF3 1484 aa22.8■■□□□ 1.24
SNCAIP-218ENST00000513719 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
SNCAIP-218ENST00000513719 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
SNCAIP-218ENST00000513719 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
SNCAIP-218ENST00000513719 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
SNCAIP-218ENST00000513719 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
SNCAIP-218ENST00000513719 WIZO95785 1651 aa22.46■■□□□ 1.19
SNCAIP-218ENST00000513719 SMARCA4P51532 1647 aa22.38■■□□□ 1.17
SNCAIP-218ENST00000513719 TOP2AP11388 1531 aaKnown RBP22.15■■□□□ 1.14
SNCAIP-218ENST00000513719 PEG3Q9GZU2 1588 aa22.06■■□□□ 1.12
SNCAIP-218ENST00000513719 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
SNCAIP-218ENST00000513719 SMARCA2P51531 1590 aa22■■□□□ 1.11
SNCAIP-218ENST00000513719 ATAD2BQ9ULI0 1458 aa21.99■■□□□ 1.11
SNCAIP-218ENST00000513719 EIF4G1Q04637 1599 aaKnown RBP21.94■■□□□ 1.1
SNCAIP-218ENST00000513719 TRIM41Q8WV44 630 aa21.89■■□□□ 1.1
SNCAIP-218ENST00000513719 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
SNCAIP-218ENST00000513719 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
SNCAIP-218ENST00000513719 NCAPD3P42695 1498 aa21.72■■□□□ 1.07
SNCAIP-218ENST00000513719 ABCC8Q09428 1581 aa21.68■■□□□ 1.06
SNCAIP-218ENST00000513719 HMGXB3Q12766 1538 aa21.65■■□□□ 1.06
SNCAIP-218ENST00000513719 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
SNCAIP-218ENST00000513719 CC2D2AQ9P2K1 1620 aa21.49■■□□□ 1.03
SNCAIP-218ENST00000513719 WRNQ14191 1432 aaPredicted RBP eCLIP21.43■■□□□ 1.02
SNCAIP-218ENST00000513719 SYNJ1O43426 1573 aa21.37■■□□□ 1.01
SNCAIP-218ENST00000513719 EHMT2Q96KQ7 1210 aa21.36■■□□□ 1.01
SNCAIP-218ENST00000513719 SOGA1O94964 1423 aa21.35■■□□□ 1.01
SNCAIP-218ENST00000513719 CFTRP13569 1480 aa21.33■■□□□ 1.01
SNCAIP-218ENST00000513719 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
SNCAIP-218ENST00000513719 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
SNCAIP-218ENST00000513719 TOP2BQ02880 1626 aa21.19■□□□□ 0.98
SNCAIP-218ENST00000513719 EEA1Q15075 1411 aa21.16■□□□□ 0.98
SNCAIP-218ENST00000513719 CSRNP3Q8WYN3 585 aa21.16■□□□□ 0.98
SNCAIP-218ENST00000513719 CUX1P39880 1505 aa21.14■□□□□ 0.97
SNCAIP-218ENST00000513719 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.97
SNCAIP-218ENST00000513719 BIVM-ERCC5R4GMW8 1640 aa21.14■□□□□ 0.97
SNCAIP-218ENST00000513719 PRDM2Q13029 1718 aa21.1■□□□□ 0.97
SNCAIP-218ENST00000513719 NESP48681 1621 aa21.03■□□□□ 0.96
SNCAIP-218ENST00000513719 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
SNCAIP-218ENST00000513719 FANCD2Q9BXW9 1451 aa20.97■□□□□ 0.95
SNCAIP-218ENST00000513719 TNIKQ9UKE5 1360 aa20.97■□□□□ 0.95
SNCAIP-218ENST00000513719 GOLGA3Q08378 1498 aa20.95■□□□□ 0.94
SNCAIP-218ENST00000513719 UBTFP17480 764 aaKnown RBP20.92■□□□□ 0.94
SNCAIP-218ENST00000513719 CEP164Q9UPV0 1460 aa20.91■□□□□ 0.94
SNCAIP-218ENST00000513719 KIF21BO75037 1637 aa20.91■□□□□ 0.94
SNCAIP-218ENST00000513719 CEP162Q5TB80 1403 aa20.9■□□□□ 0.94
SNCAIP-218ENST00000513719 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
SNCAIP-218ENST00000513719 RAPGEF2Q9Y4G8 1499 aa20.87■□□□□ 0.93
SNCAIP-218ENST00000513719 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
SNCAIP-218ENST00000513719 KIF27Q86VH2 1401 aa20.83■□□□□ 0.92
SNCAIP-218ENST00000513719 TRIM26Q12899 539 aaPredicted RBP20.82■□□□□ 0.92
SNCAIP-218ENST00000513719 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
SNCAIP-218ENST00000513719 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
SNCAIP-218ENST00000513719 TOPBP1Q92547 1522 aa20.77■□□□□ 0.92
SNCAIP-218ENST00000513719 CUX2O14529 1486 aa20.76■□□□□ 0.91
SNCAIP-218ENST00000513719 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
SNCAIP-218ENST00000513719 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
SNCAIP-218ENST00000513719 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
SNCAIP-218ENST00000513719 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
SNCAIP-218ENST00000513719 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
SNCAIP-218ENST00000513719 IGF1RP08069 1367 aa20.71■□□□□ 0.91
SNCAIP-218ENST00000513719 RAD54L2Q9Y4B4 1467 aa20.71■□□□□ 0.91
SNCAIP-218ENST00000513719 KIF21AQ7Z4S6 1674 aa20.67■□□□□ 0.9
SNCAIP-218ENST00000513719 CLIP1P30622 1438 aa20.66■□□□□ 0.9
SNCAIP-218ENST00000513719 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
SNCAIP-218ENST00000513719 RANGAP1P46060 587 aaPredicted RBP20.61■□□□□ 0.89
SNCAIP-218ENST00000513719 CARMIL1Q5VZK9 1371 aa20.57■□□□□ 0.88
SNCAIP-218ENST00000513719 HRCP23327 699 aa20.55■□□□□ 0.88
SNCAIP-218ENST00000513719 WDR97A6NE52 1622 aa20.52■□□□□ 0.87
SNCAIP-218ENST00000513719 VPS8Q8N3P4 1428 aa20.5■□□□□ 0.87
SNCAIP-218ENST00000513719 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
SNCAIP-218ENST00000513719 TTBK1Q5TCY1 1321 aaPredicted RBP20.48■□□□□ 0.87
SNCAIP-218ENST00000513719 ARAP1Q96P48 1450 aa20.47■□□□□ 0.87
SNCAIP-218ENST00000513719 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
SNCAIP-218ENST00000513719 TARBP1Q13395 1621 aaKnown RBP20.44■□□□□ 0.86
SNCAIP-218ENST00000513719 ABCA5Q8WWZ7 1642 aa20.43■□□□□ 0.86
SNCAIP-218ENST00000513719 ARHGAP35Q9NRY4 1499 aa20.41■□□□□ 0.86
SNCAIP-218ENST00000513719 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
SNCAIP-218ENST00000513719 CUL7Q14999 1698 aa20.37■□□□□ 0.85
SNCAIP-218ENST00000513719 WDR62O43379 1518 aa20.35■□□□□ 0.85
SNCAIP-218ENST00000513719 AQRO60306 1485 aaKnown RBP eCLIP20.31■□□□□ 0.84
SNCAIP-218ENST00000513719 ERCC6Q03468 1493 aa20.29■□□□□ 0.84
SNCAIP-218ENST00000513719 APLP2Q06481 763 aa20.26■□□□□ 0.83
SNCAIP-218ENST00000513719 ZNF608Q9ULD9 1512 aaPredicted RBP20.26■□□□□ 0.83
SNCAIP-218ENST00000513719 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
SNCAIP-218ENST00000513719 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
SNCAIP-218ENST00000513719 KANK4Q5T7N3 995 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms