RNA–Protein interactions for RNA: ENST00000513589.1

ABCC3-213, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 4

Gene ABCC3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-213ENST00000513589 NISCHQ9Y2I1 1504 aa30.32■■■□□ 2.44
ABCC3-213ENST00000513589 CCDC180Q9P1Z9 1646 aa26.72■■□□□ 1.87
ABCC3-213ENST00000513589 ABCC9O60706 1549 aa25.71■■□□□ 1.71
ABCC3-213ENST00000513589 DCAF8L2P0C7V8 631 aa25.36■■□□□ 1.65
ABCC3-213ENST00000513589 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
ABCC3-213ENST00000513589 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
ABCC3-213ENST00000513589 MYO15BQ96JP2 1530 aa25.15■■□□□ 1.62
ABCC3-213ENST00000513589 NACADO15069 1562 aa25.12■■□□□ 1.61
ABCC3-213ENST00000513589 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
ABCC3-213ENST00000513589 SCRIBQ14160 1630 aa24.36■■□□□ 1.49
ABCC3-213ENST00000513589 SHROOM4Q9ULL8 1493 aa24.21■■□□□ 1.47
ABCC3-213ENST00000513589 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
ABCC3-213ENST00000513589 UNC13AQ9UPW8 1703 aa24.13■■□□□ 1.45
ABCC3-213ENST00000513589 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
ABCC3-213ENST00000513589 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
ABCC3-213ENST00000513589 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
ABCC3-213ENST00000513589 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
ABCC3-213ENST00000513589 SMARCA4P51532 1647 aa23.37■■□□□ 1.33
ABCC3-213ENST00000513589 MROH2BQ7Z745 1585 aa23.29■■□□□ 1.32
ABCC3-213ENST00000513589 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
ABCC3-213ENST00000513589 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
ABCC3-213ENST00000513589 CC2D2AQ9P2K1 1620 aa23.23■■□□□ 1.31
ABCC3-213ENST00000513589 ATAD2BQ9ULI0 1458 aa23.2■■□□□ 1.3
ABCC3-213ENST00000513589 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
ABCC3-213ENST00000513589 PEG3Q9GZU2 1588 aa23.17■■□□□ 1.3
ABCC3-213ENST00000513589 SUPT5HO00267 1087 aaKnown RBP23.16■■□□□ 1.3
ABCC3-213ENST00000513589 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
ABCC3-213ENST00000513589 BAZ1BQ9UIG0 1483 aaKnown RBP23.09■■□□□ 1.29
ABCC3-213ENST00000513589 HMGXB3Q12766 1538 aa23.05■■□□□ 1.28
ABCC3-213ENST00000513589 WIZO95785 1651 aa23.02■■□□□ 1.28
ABCC3-213ENST00000513589 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
ABCC3-213ENST00000513589 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
ABCC3-213ENST00000513589 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
ABCC3-213ENST00000513589 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
ABCC3-213ENST00000513589 CFTRP13569 1480 aa22.46■■□□□ 1.19
ABCC3-213ENST00000513589 PDS5BQ9NTI5 1447 aa22.44■■□□□ 1.18
ABCC3-213ENST00000513589 NESP48681 1621 aa22.29■■□□□ 1.16
ABCC3-213ENST00000513589 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
ABCC3-213ENST00000513589 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
ABCC3-213ENST00000513589 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
ABCC3-213ENST00000513589 PRDM2Q13029 1718 aa22.16■■□□□ 1.14
ABCC3-213ENST00000513589 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
ABCC3-213ENST00000513589 MRC2Q9UBG0 1479 aa22.05■■□□□ 1.12
ABCC3-213ENST00000513589 WRNQ14191 1432 aaPredicted RBP eCLIP22.02■■□□□ 1.12
ABCC3-213ENST00000513589 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
ABCC3-213ENST00000513589 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
ABCC3-213ENST00000513589 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
ABCC3-213ENST00000513589 WDR62O43379 1518 aa21.89■■□□□ 1.09
ABCC3-213ENST00000513589 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
ABCC3-213ENST00000513589 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
ABCC3-213ENST00000513589 CHIC1Q5VXU3 224 aa21.85■■□□□ 1.09
ABCC3-213ENST00000513589 CUX2O14529 1486 aa21.84■■□□□ 1.09
ABCC3-213ENST00000513589 THOC2Q8NI27 1593 aaKnown RBP21.83■■□□□ 1.09
ABCC3-213ENST00000513589 CUX1P39880 1505 aa21.83■■□□□ 1.09
ABCC3-213ENST00000513589 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
ABCC3-213ENST00000513589 SOGA1O94964 1423 aa21.77■■□□□ 1.08
ABCC3-213ENST00000513589 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
ABCC3-213ENST00000513589 FGD5Q6ZNL6 1462 aa21.75■■□□□ 1.07
ABCC3-213ENST00000513589 IFT140Q96RY7 1462 aa21.75■■□□□ 1.07
ABCC3-213ENST00000513589 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
ABCC3-213ENST00000513589 POLA1P09884 1462 aaPredicted RBP21.72■■□□□ 1.07
ABCC3-213ENST00000513589 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
ABCC3-213ENST00000513589 RAD54L2Q9Y4B4 1467 aa21.6■■□□□ 1.05
ABCC3-213ENST00000513589 KIF27Q86VH2 1401 aa21.6■■□□□ 1.05
ABCC3-213ENST00000513589 WDR97A6NE52 1622 aa21.57■■□□□ 1.04
ABCC3-213ENST00000513589 EEA1Q15075 1411 aa21.55■■□□□ 1.04
ABCC3-213ENST00000513589 TARBP1Q13395 1621 aaKnown RBP21.53■■□□□ 1.04
ABCC3-213ENST00000513589 TDRD9Q8NDG6 1382 aaKnown RBP21.52■■□□□ 1.04
ABCC3-213ENST00000513589 GAPVD1Q14C86 1478 aa21.5■■□□□ 1.03
ABCC3-213ENST00000513589 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.02
ABCC3-213ENST00000513589 GRIN2BQ13224 1484 aa21.45■■□□□ 1.02
ABCC3-213ENST00000513589 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
ABCC3-213ENST00000513589 ZNF608Q9ULD9 1512 aaPredicted RBP21.43■■□□□ 1.02
ABCC3-213ENST00000513589 ERICH3Q5RHP9 1530 aa21.38■■□□□ 1.01
ABCC3-213ENST00000513589 IGF1RP08069 1367 aa21.37■■□□□ 1.01
ABCC3-213ENST00000513589 FAM9AQ8IZU1 332 aaPredicted RBP21.36■■□□□ 1.01
ABCC3-213ENST00000513589 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
ABCC3-213ENST00000513589 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
ABCC3-213ENST00000513589 MAGI1Q96QZ7 1491 aaPredicted RBP21.34■■□□□ 1.01
ABCC3-213ENST00000513589 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
ABCC3-213ENST00000513589 CARMIL1Q5VZK9 1371 aa21.31■■□□□ 1
ABCC3-213ENST00000513589 FHAD1B1AJZ9 1412 aa21.3■■□□□ 1
ABCC3-213ENST00000513589 FBLN2P98095 1184 aa21.27■■□□□ 1
ABCC3-213ENST00000513589 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
ABCC3-213ENST00000513589 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
ABCC3-213ENST00000513589 CUL7Q14999 1698 aa21.24■□□□□ 0.99
ABCC3-213ENST00000513589 SYNJ2O15056 1496 aa21.23■□□□□ 0.99
ABCC3-213ENST00000513589 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
ABCC3-213ENST00000513589 RAPGEF2Q9Y4G8 1499 aa21.21■□□□□ 0.99
ABCC3-213ENST00000513589 PRXQ9BXM0 1461 aa21.17■□□□□ 0.98
ABCC3-213ENST00000513589 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
ABCC3-213ENST00000513589 ADAMTS12P58397 1594 aa21.14■□□□□ 0.98
ABCC3-213ENST00000513589 UBTFP17480 764 aaKnown RBP21.13■□□□□ 0.97
ABCC3-213ENST00000513589 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
ABCC3-213ENST00000513589 GOLGA3Q08378 1498 aa21.1■□□□□ 0.97
ABCC3-213ENST00000513589 KIF21BO75037 1637 aa21.08■□□□□ 0.97
ABCC3-213ENST00000513589 NUP160Q12769 1436 aa20.99■□□□□ 0.95
ABCC3-213ENST00000513589 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
ABCC3-213ENST00000513589 KIAA0586Q9BVV6 1533 aa20.98■□□□□ 0.95
ABCC3-213ENST00000513589 TNIKQ9UKE5 1360 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms