RNA–Protein interactions for RNA: ENST00000513416.5

SEL1L3-210, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 2,344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-210ENST00000513416 NISCHQ9Y2I1 1504 aa21.94■■□□□ 1.1
SEL1L3-210ENST00000513416 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
SEL1L3-210ENST00000513416 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
SEL1L3-210ENST00000513416 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
SEL1L3-210ENST00000513416 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
SEL1L3-210ENST00000513416 ABCC9O60706 1549 aa18.07■□□□□ 0.48
SEL1L3-210ENST00000513416 NACADO15069 1562 aa17.95■□□□□ 0.46
SEL1L3-210ENST00000513416 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
SEL1L3-210ENST00000513416 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
SEL1L3-210ENST00000513416 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
SEL1L3-210ENST00000513416 SCRIBQ14160 1630 aa17.55■□□□□ 0.4
SEL1L3-210ENST00000513416 UNC13AQ9UPW8 1703 aa17.38■□□□□ 0.37
SEL1L3-210ENST00000513416 BICRAQ9NZM4 1560 aa17.18■□□□□ 0.34
SEL1L3-210ENST00000513416 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
SEL1L3-210ENST00000513416 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
SEL1L3-210ENST00000513416 CECR2Q9BXF3 1484 aa16.94■□□□□ 0.3
SEL1L3-210ENST00000513416 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
SEL1L3-210ENST00000513416 SUPT5HO00267 1087 aaKnown RBP16.92■□□□□ 0.3
SEL1L3-210ENST00000513416 SMARCA4P51532 1647 aa16.89■□□□□ 0.29
SEL1L3-210ENST00000513416 MROH2BQ7Z745 1585 aa16.88■□□□□ 0.29
SEL1L3-210ENST00000513416 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
SEL1L3-210ENST00000513416 WIZO95785 1651 aa16.74■□□□□ 0.27
SEL1L3-210ENST00000513416 EIF4G1Q04637 1599 aaKnown RBP16.68■□□□□ 0.26
SEL1L3-210ENST00000513416 SMARCA2P51531 1590 aa16.67■□□□□ 0.26
SEL1L3-210ENST00000513416 TOP2AP11388 1531 aaKnown RBP16.66■□□□□ 0.26
SEL1L3-210ENST00000513416 ATAD2BQ9ULI0 1458 aa16.6■□□□□ 0.25
SEL1L3-210ENST00000513416 HMGXB3Q12766 1538 aa16.53■□□□□ 0.24
SEL1L3-210ENST00000513416 NCAPD3P42695 1498 aa16.52■□□□□ 0.23
SEL1L3-210ENST00000513416 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
SEL1L3-210ENST00000513416 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
SEL1L3-210ENST00000513416 CCDC88BA6NC98 1476 aa16.41■□□□□ 0.22
SEL1L3-210ENST00000513416 CHIC1Q5VXU3 224 aa16.23■□□□□ 0.19
SEL1L3-210ENST00000513416 PRDM2Q13029 1718 aa16.13■□□□□ 0.17
SEL1L3-210ENST00000513416 CFTRP13569 1480 aa16.11■□□□□ 0.17
SEL1L3-210ENST00000513416 CADPSQ9ULU8 1353 aa16.05■□□□□ 0.16
SEL1L3-210ENST00000513416 TRIM41Q8WV44 630 aa16.01■□□□□ 0.15
SEL1L3-210ENST00000513416 LAMC3Q9Y6N6 1575 aa16■□□□□ 0.15
SEL1L3-210ENST00000513416 ABCC8Q09428 1581 aa15.98■□□□□ 0.15
SEL1L3-210ENST00000513416 WRNQ14191 1432 aaPredicted RBP eCLIP15.97■□□□□ 0.15
SEL1L3-210ENST00000513416 BIVM-ERCC5R4GMW8 1640 aa15.91■□□□□ 0.14
SEL1L3-210ENST00000513416 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
SEL1L3-210ENST00000513416 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
SEL1L3-210ENST00000513416 SYNJ1O43426 1573 aa15.88■□□□□ 0.13
SEL1L3-210ENST00000513416 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
SEL1L3-210ENST00000513416 PDS5BQ9NTI5 1447 aa15.84■□□□□ 0.13
SEL1L3-210ENST00000513416 NESP48681 1621 aa15.83■□□□□ 0.12
SEL1L3-210ENST00000513416 CUX1P39880 1505 aa15.81■□□□□ 0.12
SEL1L3-210ENST00000513416 EEA1Q15075 1411 aa15.8■□□□□ 0.12
SEL1L3-210ENST00000513416 CEP164Q9UPV0 1460 aa15.79■□□□□ 0.12
SEL1L3-210ENST00000513416 DNMBPQ6XZF7 1577 aa15.76■□□□□ 0.11
SEL1L3-210ENST00000513416 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
SEL1L3-210ENST00000513416 TOPBP1Q92547 1522 aa15.69■□□□□ 0.1
SEL1L3-210ENST00000513416 SOGA1O94964 1423 aa15.66■□□□□ 0.1
SEL1L3-210ENST00000513416 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
SEL1L3-210ENST00000513416 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
SEL1L3-210ENST00000513416 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
SEL1L3-210ENST00000513416 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
SEL1L3-210ENST00000513416 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
SEL1L3-210ENST00000513416 FAM9AQ8IZU1 332 aaPredicted RBP15.58■□□□□ 0.08
SEL1L3-210ENST00000513416 CSRNP3Q8WYN3 585 aa15.58■□□□□ 0.08
SEL1L3-210ENST00000513416 WDR62O43379 1518 aa15.58■□□□□ 0.08
SEL1L3-210ENST00000513416 RUSC2Q8N2Y8 1516 aa15.57■□□□□ 0.08
SEL1L3-210ENST00000513416 KIF21BO75037 1637 aa15.57■□□□□ 0.08
SEL1L3-210ENST00000513416 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
SEL1L3-210ENST00000513416 ERCC6Q03468 1493 aa15.56■□□□□ 0.08
SEL1L3-210ENST00000513416 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
SEL1L3-210ENST00000513416 THOC2Q8NI27 1593 aaKnown RBP15.53■□□□□ 0.08
SEL1L3-210ENST00000513416 CUX2O14529 1486 aa15.52■□□□□ 0.08
SEL1L3-210ENST00000513416 GOLGA3Q08378 1498 aa15.51■□□□□ 0.07
SEL1L3-210ENST00000513416 LOC105371045A0A1W2PR82 267 aa15.5■□□□□ 0.07
SEL1L3-210ENST00000513416 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
SEL1L3-210ENST00000513416 TARBP1Q13395 1621 aaKnown RBP15.49■□□□□ 0.07
SEL1L3-210ENST00000513416 RAD54L2Q9Y4B4 1467 aa15.47■□□□□ 0.07
SEL1L3-210ENST00000513416 PRXQ9BXM0 1461 aa15.47■□□□□ 0.07
SEL1L3-210ENST00000513416 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.06
SEL1L3-210ENST00000513416 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
SEL1L3-210ENST00000513416 TNIKQ9UKE5 1360 aa15.44■□□□□ 0.06
SEL1L3-210ENST00000513416 CUL7Q14999 1698 aa15.43■□□□□ 0.06
SEL1L3-210ENST00000513416 IGF1RP08069 1367 aa15.41■□□□□ 0.06
SEL1L3-210ENST00000513416 GAPVD1Q14C86 1478 aa15.38■□□□□ 0.05
SEL1L3-210ENST00000513416 RAPGEF2Q9Y4G8 1499 aa15.37■□□□□ 0.05
SEL1L3-210ENST00000513416 PBRM1Q86U86 1689 aa15.35■□□□□ 0.05
SEL1L3-210ENST00000513416 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
SEL1L3-210ENST00000513416 UBTFP17480 764 aaKnown RBP15.32■□□□□ 0.04
SEL1L3-210ENST00000513416 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
SEL1L3-210ENST00000513416 GRIN2BQ13224 1484 aa15.3■□□□□ 0.04
SEL1L3-210ENST00000513416 CEP162Q5TB80 1403 aa15.3■□□□□ 0.04
SEL1L3-210ENST00000513416 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
SEL1L3-210ENST00000513416 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
SEL1L3-210ENST00000513416 ADAMTS12P58397 1594 aa15.25■□□□□ 0.03
SEL1L3-210ENST00000513416 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
SEL1L3-210ENST00000513416 ZNF608Q9ULD9 1512 aaPredicted RBP15.24■□□□□ 0.03
SEL1L3-210ENST00000513416 AQRO60306 1485 aaKnown RBP eCLIP15.24■□□□□ 0.03
SEL1L3-210ENST00000513416 CTTNBP2Q8WZ74 1663 aa15.22■□□□□ 0.03
SEL1L3-210ENST00000513416 MAGI1Q96QZ7 1491 aaPredicted RBP15.21■□□□□ 0.03
SEL1L3-210ENST00000513416 CLIP1P30622 1438 aa15.21■□□□□ 0.02
SEL1L3-210ENST00000513416 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
SEL1L3-210ENST00000513416 SYNJ2O15056 1496 aa15.13■□□□□ 0.01
SEL1L3-210ENST00000513416 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
SEL1L3-210ENST00000513416 GRIN2AQ12879 1464 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms