RNA–Protein interactions for RNA: ENST00000513161.1

NECAP2-212, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 5

Gene NECAP2, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-212ENST00000513161 NISCHQ9Y2I1 1504 aa31.48■■■□□ 2.63
NECAP2-212ENST00000513161 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
NECAP2-212ENST00000513161 ABCC9O60706 1549 aa27.7■■■□□ 2.02
NECAP2-212ENST00000513161 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
NECAP2-212ENST00000513161 RB1CC1Q8TDY2 1594 aa26.51■■□□□ 1.83
NECAP2-212ENST00000513161 NACADO15069 1562 aa26.42■■□□□ 1.82
NECAP2-212ENST00000513161 ZCCHC6Q5VYS8 1495 aaKnown RBP26.15■■□□□ 1.78
NECAP2-212ENST00000513161 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.77
NECAP2-212ENST00000513161 DCAF1Q9Y4B6 1507 aa25.98■■□□□ 1.75
NECAP2-212ENST00000513161 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
NECAP2-212ENST00000513161 UNC13AQ9UPW8 1703 aa25.87■■□□□ 1.73
NECAP2-212ENST00000513161 BICRAQ9NZM4 1560 aa25.65■■□□□ 1.7
NECAP2-212ENST00000513161 SCRIBQ14160 1630 aa25.63■■□□□ 1.69
NECAP2-212ENST00000513161 DNAJC5BQ9UF47 199 aa25.58■■□□□ 1.69
NECAP2-212ENST00000513161 SHROOM4Q9ULL8 1493 aa25.34■■□□□ 1.65
NECAP2-212ENST00000513161 EIF4G1Q04637 1599 aaKnown RBP25.04■■□□□ 1.6
NECAP2-212ENST00000513161 CC2D2AQ9P2K1 1620 aa24.99■■□□□ 1.59
NECAP2-212ENST00000513161 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.57
NECAP2-212ENST00000513161 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
NECAP2-212ENST00000513161 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
NECAP2-212ENST00000513161 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
NECAP2-212ENST00000513161 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
NECAP2-212ENST00000513161 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
NECAP2-212ENST00000513161 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
NECAP2-212ENST00000513161 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
NECAP2-212ENST00000513161 HMGXB3Q12766 1538 aa24.2■■□□□ 1.47
NECAP2-212ENST00000513161 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
NECAP2-212ENST00000513161 WIZO95785 1651 aa24.02■■□□□ 1.44
NECAP2-212ENST00000513161 RSF1Q96T23 1441 aaPredicted RBP23.95■■□□□ 1.42
NECAP2-212ENST00000513161 ERCC6Q03468 1493 aa23.92■■□□□ 1.42
NECAP2-212ENST00000513161 NESP48681 1621 aa23.89■■□□□ 1.42
NECAP2-212ENST00000513161 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
NECAP2-212ENST00000513161 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
NECAP2-212ENST00000513161 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
NECAP2-212ENST00000513161 PDS5BQ9NTI5 1447 aa23.67■■□□□ 1.38
NECAP2-212ENST00000513161 CUX2O14529 1486 aa23.62■■□□□ 1.37
NECAP2-212ENST00000513161 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
NECAP2-212ENST00000513161 CCDC88BA6NC98 1476 aa23.49■■□□□ 1.35
NECAP2-212ENST00000513161 CFTRP13569 1480 aa23.49■■□□□ 1.35
NECAP2-212ENST00000513161 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
NECAP2-212ENST00000513161 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
NECAP2-212ENST00000513161 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
NECAP2-212ENST00000513161 MRC2Q9UBG0 1479 aa23.41■■□□□ 1.34
NECAP2-212ENST00000513161 SUPT5HO00267 1087 aaKnown RBP23.4■■□□□ 1.34
NECAP2-212ENST00000513161 WDR62O43379 1518 aa23.28■■□□□ 1.32
NECAP2-212ENST00000513161 PRDM2Q13029 1718 aa23.27■■□□□ 1.32
NECAP2-212ENST00000513161 DNAJC5Q9H3Z4 198 aa23.19■■□□□ 1.3
NECAP2-212ENST00000513161 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
NECAP2-212ENST00000513161 ABCC8Q09428 1581 aa23.03■■□□□ 1.28
NECAP2-212ENST00000513161 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
NECAP2-212ENST00000513161 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
NECAP2-212ENST00000513161 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
NECAP2-212ENST00000513161 ZNF608Q9ULD9 1512 aaPredicted RBP22.84■■□□□ 1.25
NECAP2-212ENST00000513161 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
NECAP2-212ENST00000513161 SOGA1O94964 1423 aa22.78■■□□□ 1.24
NECAP2-212ENST00000513161 CUX1P39880 1505 aa22.77■■□□□ 1.24
NECAP2-212ENST00000513161 OSCARQ8IYS5 282 aa22.76■■□□□ 1.23
NECAP2-212ENST00000513161 FGD5Q6ZNL6 1462 aa22.75■■□□□ 1.23
NECAP2-212ENST00000513161 RAD54L2Q9Y4B4 1467 aa22.75■■□□□ 1.23
NECAP2-212ENST00000513161 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
NECAP2-212ENST00000513161 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.233e-7■■■■□ 19.8
NECAP2-212ENST00000513161 EIF4G3O43432 1585 aaKnown RBP22.71■■□□□ 1.23
NECAP2-212ENST00000513161 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
NECAP2-212ENST00000513161 FBLN2P98095 1184 aa22.63■■□□□ 1.21
NECAP2-212ENST00000513161 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.212e-6■■■■□ 22.3
NECAP2-212ENST00000513161 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
NECAP2-212ENST00000513161 TOP2BQ02880 1626 aa22.53■■□□□ 1.2
NECAP2-212ENST00000513161 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
NECAP2-212ENST00000513161 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
NECAP2-212ENST00000513161 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
NECAP2-212ENST00000513161 GAPVD1Q14C86 1478 aa22.49■■□□□ 1.19
NECAP2-212ENST00000513161 CHMP7Q8WUX9 453 aaPredicted RBP22.49■■□□□ 1.19
NECAP2-212ENST00000513161 SNAPC4Q5SXM2 1469 aa22.48■■□□□ 1.19
NECAP2-212ENST00000513161 ABCA10Q8WWZ4 1543 aa22.48■■□□□ 1.19
NECAP2-212ENST00000513161 CHD1O14646 1710 aa22.48■■□□□ 1.19
NECAP2-212ENST00000513161 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
NECAP2-212ENST00000513161 MAGI1Q96QZ7 1491 aaPredicted RBP22.42■■□□□ 1.18
NECAP2-212ENST00000513161 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
NECAP2-212ENST00000513161 ABCA5Q8WWZ7 1642 aa22.38■■□□□ 1.17
NECAP2-212ENST00000513161 SYNJ2O15056 1496 aa22.35■■□□□ 1.17
NECAP2-212ENST00000513161 RIMBP3CA6NJZ7 1639 aa22.29■■□□□ 1.16
NECAP2-212ENST00000513161 RIMBP3BA6NNM3 1639 aa22.29■■□□□ 1.16
NECAP2-212ENST00000513161 RIMBP3Q9UFD9 1639 aa22.29■■□□□ 1.16
NECAP2-212ENST00000513161 ARHGEF11O15085 1522 aa22.27■■□□□ 1.16
NECAP2-212ENST00000513161 ERICH3Q5RHP9 1530 aa22.22■■□□□ 1.15
NECAP2-212ENST00000513161 CYB5RLQ6IPT4 315 aa22.22■■□□□ 1.15
NECAP2-212ENST00000513161 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
NECAP2-212ENST00000513161 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
NECAP2-212ENST00000513161 ADAMTS12P58397 1594 aa22.19■■□□□ 1.14
NECAP2-212ENST00000513161 CLASP1Q7Z460 1538 aa22.18■■□□□ 1.14
NECAP2-212ENST00000513161 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
NECAP2-212ENST00000513161 IGF1RP08069 1367 aa22.09■■□□□ 1.13
NECAP2-212ENST00000513161 ARAP1Q96P48 1450 aa22.07■■□□□ 1.12
NECAP2-212ENST00000513161 NUP160Q12769 1436 aa22.06■■□□□ 1.12
NECAP2-212ENST00000513161 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
NECAP2-212ENST00000513161 CUL7Q14999 1698 aa21.99■■□□□ 1.11
NECAP2-212ENST00000513161 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
NECAP2-212ENST00000513161 JPH4Q96JJ6 628 aa21.97■■□□□ 1.11
NECAP2-212ENST00000513161 ERCC6L2Q5T890 1561 aa21.91■■□□□ 1.1
NECAP2-212ENST00000513161 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms