RNA–Protein interactions for RNA: ENST00000513151.5

SKP2-206, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3

Gene SKP2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-206ENST00000513151 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
SKP2-206ENST00000513151 CCDC180Q9P1Z9 1646 aa19.16■□□□□ 0.66
SKP2-206ENST00000513151 ABCC9O60706 1549 aa18.76■□□□□ 0.59
SKP2-206ENST00000513151 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
SKP2-206ENST00000513151 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
SKP2-206ENST00000513151 NACADO15069 1562 aa18.04■□□□□ 0.48
SKP2-206ENST00000513151 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
SKP2-206ENST00000513151 MYO15BQ96JP2 1530 aa17.96■□□□□ 0.47
SKP2-206ENST00000513151 DCAF1Q9Y4B6 1507 aa17.89■□□□□ 0.45
SKP2-206ENST00000513151 UNC13AQ9UPW8 1703 aa17.58■□□□□ 0.4
SKP2-206ENST00000513151 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
SKP2-206ENST00000513151 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
SKP2-206ENST00000513151 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
SKP2-206ENST00000513151 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
SKP2-206ENST00000513151 DNAJC5BQ9UF47 199 aa17.22■□□□□ 0.35
SKP2-206ENST00000513151 EIF4G1Q04637 1599 aaKnown RBP17.03■□□□□ 0.32
SKP2-206ENST00000513151 CC2D2AQ9P2K1 1620 aa16.95■□□□□ 0.3
SKP2-206ENST00000513151 CECR2Q9BXF3 1484 aa16.86■□□□□ 0.29
SKP2-206ENST00000513151 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
SKP2-206ENST00000513151 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
SKP2-206ENST00000513151 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
SKP2-206ENST00000513151 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
SKP2-206ENST00000513151 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
SKP2-206ENST00000513151 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
SKP2-206ENST00000513151 PEG3Q9GZU2 1588 aa16.59■□□□□ 0.25
SKP2-206ENST00000513151 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
SKP2-206ENST00000513151 BAZ1BQ9UIG0 1483 aaKnown RBP16.54■□□□□ 0.24
SKP2-206ENST00000513151 RSF1Q96T23 1441 aaPredicted RBP16.51■□□□□ 0.23
SKP2-206ENST00000513151 WIZO95785 1651 aa16.46■□□□□ 0.23
SKP2-206ENST00000513151 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
SKP2-206ENST00000513151 NESP48681 1621 aa16.24■□□□□ 0.19
SKP2-206ENST00000513151 CADPSQ9ULU8 1353 aa16.2■□□□□ 0.18
SKP2-206ENST00000513151 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
SKP2-206ENST00000513151 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
SKP2-206ENST00000513151 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
SKP2-206ENST00000513151 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
SKP2-206ENST00000513151 PDS5BQ9NTI5 1447 aa16.12■□□□□ 0.17
SKP2-206ENST00000513151 CFTRP13569 1480 aa16.1■□□□□ 0.17
SKP2-206ENST00000513151 KIF21AQ7Z4S6 1674 aa16.01■□□□□ 0.15
SKP2-206ENST00000513151 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
SKP2-206ENST00000513151 CUX2O14529 1486 aa15.97■□□□□ 0.15
SKP2-206ENST00000513151 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.14
SKP2-206ENST00000513151 THOC2Q8NI27 1593 aaKnown RBP15.95■□□□□ 0.14
SKP2-206ENST00000513151 MRC2Q9UBG0 1479 aa15.93■□□□□ 0.14
SKP2-206ENST00000513151 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
SKP2-206ENST00000513151 WDR62O43379 1518 aa15.86■□□□□ 0.13
SKP2-206ENST00000513151 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
SKP2-206ENST00000513151 ABCC8Q09428 1581 aa15.76■□□□□ 0.11
SKP2-206ENST00000513151 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
SKP2-206ENST00000513151 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
SKP2-206ENST00000513151 IFT140Q96RY7 1462 aa15.64■□□□□ 0.09
SKP2-206ENST00000513151 CUX1P39880 1505 aa15.62■□□□□ 0.09
SKP2-206ENST00000513151 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
SKP2-206ENST00000513151 SOGA1O94964 1423 aa15.57■□□□□ 0.08
SKP2-206ENST00000513151 FGD5Q6ZNL6 1462 aa15.57■□□□□ 0.08
SKP2-206ENST00000513151 WRNQ14191 1432 aaPredicted RBP eCLIP15.56■□□□□ 0.08
SKP2-206ENST00000513151 ZNF608Q9ULD9 1512 aaPredicted RBP15.55■□□□□ 0.08
SKP2-206ENST00000513151 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
SKP2-206ENST00000513151 RAD54L2Q9Y4B4 1467 aa15.54■□□□□ 0.08
SKP2-206ENST00000513151 DNAJC5Q9H3Z4 198 aa15.5■□□□□ 0.07
SKP2-206ENST00000513151 AQRO60306 1485 aaKnown RBP eCLIP15.49■□□□□ 0.074e-6■■■■□ 24.8
SKP2-206ENST00000513151 TOP2BQ02880 1626 aa15.49■□□□□ 0.07
SKP2-206ENST00000513151 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
SKP2-206ENST00000513151 TDRD9Q8NDG6 1382 aaKnown RBP15.48■□□□□ 0.07
SKP2-206ENST00000513151 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
SKP2-206ENST00000513151 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
SKP2-206ENST00000513151 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
SKP2-206ENST00000513151 WDR97A6NE52 1622 aa15.42■□□□□ 0.06
SKP2-206ENST00000513151 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
SKP2-206ENST00000513151 GRIN2BQ13224 1484 aa15.37■□□□□ 0.05
SKP2-206ENST00000513151 GAPVD1Q14C86 1478 aa15.37■□□□□ 0.05
SKP2-206ENST00000513151 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
SKP2-206ENST00000513151 FBLN2P98095 1184 aa15.32■□□□□ 0.04
SKP2-206ENST00000513151 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
SKP2-206ENST00000513151 MAGI1Q96QZ7 1491 aaPredicted RBP15.31■□□□□ 0.04
SKP2-206ENST00000513151 CHMP7Q8WUX9 453 aaPredicted RBP15.29■□□□□ 0.04
SKP2-206ENST00000513151 PBRM1Q86U86 1689 aa15.27■□□□□ 0.03
SKP2-206ENST00000513151 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
SKP2-206ENST00000513151 SYNJ2O15056 1496 aa15.26■□□□□ 0.03
SKP2-206ENST00000513151 CHD1O14646 1710 aa15.24■□□□□ 0.03
SKP2-206ENST00000513151 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
SKP2-206ENST00000513151 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
SKP2-206ENST00000513151 FHAD1B1AJZ9 1412 aa15.2■□□□□ 0.02
SKP2-206ENST00000513151 IGF1RP08069 1367 aa15.19■□□□□ 0.02
SKP2-206ENST00000513151 ADAMTS12P58397 1594 aa15.17■□□□□ 0.02
SKP2-206ENST00000513151 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
SKP2-206ENST00000513151 CLASP1Q7Z460 1538 aa15.11■□□□□ 0.01
SKP2-206ENST00000513151 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
SKP2-206ENST00000513151 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
SKP2-206ENST00000513151 CARMIL1Q5VZK9 1371 aa15.1■□□□□ 0.01
SKP2-206ENST00000513151 NUP160Q12769 1436 aa15.09■□□□□ 0.01
SKP2-206ENST00000513151 CUL7Q14999 1698 aa15.08■□□□□ 0
SKP2-206ENST00000513151 ARHGEF11O15085 1522 aa15.07■□□□□ 0
SKP2-206ENST00000513151 CEP170Q5SW79 1584 aa15.06■□□□□ 0
SKP2-206ENST00000513151 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ -0
SKP2-206ENST00000513151 RIMBP3BA6NNM3 1639 aa15.05■□□□□ -0
SKP2-206ENST00000513151 RIMBP3Q9UFD9 1639 aa15.05■□□□□ -0
SKP2-206ENST00000513151 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
SKP2-206ENST00000513151 JPH4Q96JJ6 628 aa14.99□□□□□ -0.01
SKP2-206ENST00000513151 RAPGEF2Q9Y4G8 1499 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms