RNA–Protein interactions for RNA: ENST00000512966.1

SH3TC1-222, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 514 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-222	ENST00000512966	NISCH	Q9Y2I1	1504 aa		39.59	■■■■□ 3.93
SH3TC1-222	ENST00000512966	CCDC180	Q9P1Z9	1646 aa		34.7	■■■■□ 3.14
SH3TC1-222	ENST00000512966	ZCCHC6	Q5VYS8	1495 aa	Known RBP	33.18	■■■□□ 2.9
SH3TC1-222	ENST00000512966	ABCC9	O60706	1549 aa		33.07	■■■□□ 2.88
SH3TC1-222	ENST00000512966	DCAF1	Q9Y4B6	1507 aa		32.83	■■■□□ 2.85
SH3TC1-222	ENST00000512966	DCAF8L2	P0C7V8	631 aa		32.7	■■■□□ 2.83
SH3TC1-222	ENST00000512966	MYO15B	Q96JP2	1530 aa		32.62	■■■□□ 2.81
SH3TC1-222	ENST00000512966	NACAD	O15069	1562 aa		32.46	■■■□□ 2.79
SH3TC1-222	ENST00000512966	RB1CC1	Q8TDY2	1594 aa		32.24	■■■□□ 2.75
SH3TC1-222	ENST00000512966	SHROOM4	Q9ULL8	1493 aa		31.85	■■■□□ 2.69
SH3TC1-222	ENST00000512966	SCRIB	Q14160	1630 aa		31.73	■■■□□ 2.67
SH3TC1-222	ENST00000512966	UNC13A	Q9UPW8	1703 aa		31.39	■■■□□ 2.62
SH3TC1-222	ENST00000512966	BICRA	Q9NZM4	1560 aa		31.21	■■■□□ 2.59
SH3TC1-222	ENST00000512966	PABPN1	Q86U42	306 aa	Known RBP eCLIP	31.11	■■■□□ 2.57
SH3TC1-222	ENST00000512966	CECR2	Q9BXF3	1484 aa		30.73	■■■□□ 2.51
SH3TC1-222	ENST00000512966	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	30.61	■■■□□ 2.49
SH3TC1-222	ENST00000512966	RSF1	Q96T23	1441 aa	Predicted RBP	30.56	■■■□□ 2.48
SH3TC1-222	ENST00000512966	MROH2B	Q7Z745	1585 aa		30.51	■■■□□ 2.47
SH3TC1-222	ENST00000512966	SUPT5H	O00267	1087 aa	Known RBP	30.5	■■■□□ 2.47
SH3TC1-222	ENST00000512966	SMARCA4	P51532	1647 aa		30.47	■■■□□ 2.47
SH3TC1-222	ENST00000512966	EIF4G1	Q04637	1599 aa	Known RBP	30.31	■■■□□ 2.44
SH3TC1-222	ENST00000512966	PEG3	Q9GZU2	1588 aa		30.2	■■■□□ 2.42
SH3TC1-222	ENST00000512966	WIZ	O95785	1651 aa		30.18	■■■□□ 2.42
SH3TC1-222	ENST00000512966	ATAD2B	Q9ULI0	1458 aa		30.12	■■■□□ 2.41
SH3TC1-222	ENST00000512966	SMARCA2	P51531	1590 aa		30.11	■■■□□ 2.41
SH3TC1-222	ENST00000512966	NCAPD3	P42695	1498 aa		29.99	■■■□□ 2.39
SH3TC1-222	ENST00000512966	TOP2A	P11388	1531 aa	Known RBP	29.96	■■■□□ 2.39
SH3TC1-222	ENST00000512966	CC2D2A	Q9P2K1	1620 aa		29.93	■■■□□ 2.38
SH3TC1-222	ENST00000512966	BAZ1B	Q9UIG0	1483 aa	Known RBP	29.9	■■■□□ 2.38
SH3TC1-222	ENST00000512966	HMGXB3	Q12766	1538 aa		29.87	■■■□□ 2.37
SH3TC1-222	ENST00000512966	CCDC88B	A6NC98	1476 aa		29.64	■■■□□ 2.34
SH3TC1-222	ENST00000512966	DNAJC5B	Q9UF47	199 aa		29.52	■■■□□ 2.32
SH3TC1-222	ENST00000512966	CFTR	P13569	1480 aa		29.17	■■■□□ 2.26
SH3TC1-222	ENST00000512966	CADPS	Q9ULU8	1353 aa		29.16	■■■□□ 2.26
SH3TC1-222	ENST00000512966	CHIC1	Q5VXU3	224 aa		29.08	■■■□□ 2.25
SH3TC1-222	ENST00000512966	LAMC3	Q9Y6N6	1575 aa		28.97	■■■□□ 2.23
SH3TC1-222	ENST00000512966	NES	P48681	1621 aa		28.89	■■■□□ 2.22
SH3TC1-222	ENST00000512966	PRDM2	Q13029	1718 aa		28.88	■■■□□ 2.21
SH3TC1-222	ENST00000512966	PDS5B	Q9NTI5	1447 aa		28.8	■■■□□ 2.2
SH3TC1-222	ENST00000512966	TRIM41	Q8WV44	630 aa		28.8	■■■□□ 2.2
SH3TC1-222	ENST00000512966	ABCC8	Q09428	1581 aa		28.79	■■■□□ 2.2
SH3TC1-222	ENST00000512966	FANCD2	Q9BXW9	1451 aa		28.78	■■■□□ 2.2
SH3TC1-222	ENST00000512966	WRN	Q14191	1432 aa	Predicted RBP eCLIP	28.77	■■■□□ 2.2
SH3TC1-222	ENST00000512966	CEP164	Q9UPV0	1460 aa		28.65	■■■□□ 2.18
SH3TC1-222	ENST00000512966	SYNJ1	O43426	1573 aa		28.58	■■■□□ 2.17
SH3TC1-222	ENST00000512966	TOP2B	Q02880	1626 aa		28.57	■■■□□ 2.16
SH3TC1-222	ENST00000512966	CUX1	P39880	1505 aa		28.56	■■■□□ 2.16
SH3TC1-222	ENST00000512966	BIVM-ERCC5	R4GMW8	1640 aa		28.53	■■■□□ 2.16
SH3TC1-222	ENST00000512966	KIF21A	Q7Z4S6	1674 aa		28.5	■■■□□ 2.15
SH3TC1-222	ENST00000512966	DNMBP	Q6XZF7	1577 aa		28.46	■■■□□ 2.15
SH3TC1-222	ENST00000512966	TOPBP1	Q92547	1522 aa		28.43	■■■□□ 2.14
SH3TC1-222	ENST00000512966	ERCC6	Q03468	1493 aa		28.42	■■■□□ 2.14
SH3TC1-222	ENST00000512966	URB2	Q14146	1524 aa	Known RBP	28.42	■■■□□ 2.14
SH3TC1-222	ENST00000512966	MRC2	Q9UBG0	1479 aa		28.41	■■■□□ 2.14
SH3TC1-222	ENST00000512966	FGD5	Q6ZNL6	1462 aa		28.32	■■■□□ 2.12
SH3TC1-222	ENST00000512966	WDR62	O43379	1518 aa		28.27	■■■□□ 2.12
SH3TC1-222	ENST00000512966	POLA1	P09884	1462 aa	Predicted RBP	28.25	■■■□□ 2.11
SH3TC1-222	ENST00000512966	EEA1	Q15075	1411 aa		28.25	■■■□□ 2.11
SH3TC1-222	ENST00000512966	SOGA1	O94964	1423 aa		28.23	■■■□□ 2.11
SH3TC1-222	ENST00000512966	THOC2	Q8NI27	1593 aa	Known RBP	28.21	■■■□□ 2.11
SH3TC1-222	ENST00000512966	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.14	■■■□□ 2.1
SH3TC1-222	ENST00000512966	RAD54L2	Q9Y4B4	1467 aa		28.12	■■■□□ 2.09
SH3TC1-222	ENST00000512966	RUSC2	Q8N2Y8	1516 aa		28.12	■■■□□ 2.09
SH3TC1-222	ENST00000512966	ABCA10	Q8WWZ4	1543 aa		28.12	■■■□□ 2.09
SH3TC1-222	ENST00000512966	KIF27	Q86VH2	1401 aa		28.11	■■■□□ 2.09
SH3TC1-222	ENST00000512966	CSRNP3	Q8WYN3	585 aa		28.08	■■■□□ 2.09
SH3TC1-222	ENST00000512966	CUX2	O14529	1486 aa		28.07	■■■□□ 2.08
SH3TC1-222	ENST00000512966	IFT140	Q96RY7	1462 aa		28.03	■■■□□ 2.08
SH3TC1-222	ENST00000512966	TARBP1	Q13395	1621 aa	Known RBP	28.01	■■■□□ 2.07
SH3TC1-222	ENST00000512966	WDR97	A6NE52	1622 aa		27.96	■■■□□ 2.07
SH3TC1-222	ENST00000512966	IGF1R	P08069	1367 aa		27.9	■■■□□ 2.06
SH3TC1-222	ENST00000512966	TDRD9	Q8NDG6	1382 aa	Known RBP	27.89	■■■□□ 2.06
SH3TC1-222	ENST00000512966	LOC105371045	A0A1W2PR82	267 aa		27.87	■■■□□ 2.05
SH3TC1-222	ENST00000512966	ABCA5	Q8WWZ7	1642 aa		27.86	■■■□□ 2.05
SH3TC1-222	ENST00000512966	GAPVD1	Q14C86	1478 aa		27.86	■■■□□ 2.05
SH3TC1-222	ENST00000512966	PRX	Q9BXM0	1461 aa		27.82	■■■□□ 2.04
SH3TC1-222	ENST00000512966	KIF21B	O75037	1637 aa		27.8	■■■□□ 2.04
SH3TC1-222	ENST00000512966	ERICH3	Q5RHP9	1530 aa		27.79	■■■□□ 2.04
SH3TC1-222	ENST00000512966	ZNF608	Q9ULD9	1512 aa	Predicted RBP	27.78	■■■□□ 2.04
SH3TC1-222	ENST00000512966	AQR	O60306	1485 aa	Known RBP eCLIP	27.78	■■■□□ 2.04
SH3TC1-222	ENST00000512966	GOLGA3	Q08378	1498 aa		27.76	■■■□□ 2.03
SH3TC1-222	ENST00000512966	CARMIL1	Q5VZK9	1371 aa		27.74	■■■□□ 2.03
SH3TC1-222	ENST00000512966	GRIN2B	Q13224	1484 aa		27.73	■■■□□ 2.03
SH3TC1-222	ENST00000512966	RAPGEF2	Q9Y4G8	1499 aa		27.68	■■■□□ 2.02
SH3TC1-222	ENST00000512966	CUL7	Q14999	1698 aa		27.68	■■■□□ 2.02
SH3TC1-222	ENST00000512966	EIF4G3	O43432	1585 aa	Known RBP	27.67	■■■□□ 2.02
SH3TC1-222	ENST00000512966	EHMT2	Q96KQ7	1210 aa		27.65	■■■□□ 2.02
SH3TC1-222	ENST00000512966	TNIK	Q9UKE5	1360 aa		27.63	■■■□□ 2.01
SH3TC1-222	ENST00000512966	PBRM1	Q86U86	1689 aa		27.62	■■■□□ 2.01
SH3TC1-222	ENST00000512966	UBTF	P17480	764 aa	Known RBP	27.62	■■■□□ 2.01
SH3TC1-222	ENST00000512966	FHAD1	B1AJZ9	1412 aa		27.59	■■■□□ 2.01
SH3TC1-222	ENST00000512966	MAGI1	Q96QZ7	1491 aa	Predicted RBP	27.55	■■■□□ 2
SH3TC1-222	ENST00000512966	ADAMTS12	P58397	1594 aa		27.52	■■■□□ 2
SH3TC1-222	ENST00000512966	SNAPC4	Q5SXM2	1469 aa		27.52	■■■□□ 2
SH3TC1-222	ENST00000512966	SYNJ2	O15056	1496 aa		27.43	■■□□□ 1.98
SH3TC1-222	ENST00000512966	CEP162	Q5TB80	1403 aa		27.38	■■□□□ 1.97
SH3TC1-222	ENST00000512966	CHMP7	Q8WUX9	453 aa	Predicted RBP	27.37	■■□□□ 1.97
SH3TC1-222	ENST00000512966	GRIN2A	Q12879	1464 aa		27.36	■■□□□ 1.97
SH3TC1-222	ENST00000512966	CLIP1	P30622	1438 aa		27.28	■■□□□ 1.96
SH3TC1-222	ENST00000512966	FBLN2	P98095	1184 aa		27.26	■■□□□ 1.95

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms