RNA–Protein interactions for RNA: ENST00000512807.1

PLXND1-215, Transcript of plexin D1, humanhuman

TSL 3

Gene PLXND1, Length 704 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-215ENST00000512807 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
PLXND1-215ENST00000512807 CCDC180Q9P1Z9 1646 aa27.82■■■□□ 2.04
PLXND1-215ENST00000512807 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
PLXND1-215ENST00000512807 DCAF1Q9Y4B6 1507 aa26.33■■□□□ 1.81
PLXND1-215ENST00000512807 ABCC9O60706 1549 aa26.24■■□□□ 1.79
PLXND1-215ENST00000512807 DCAF8L2P0C7V8 631 aa26.15■■□□□ 1.78
PLXND1-215ENST00000512807 MYO15BQ96JP2 1530 aa26.09■■□□□ 1.77
PLXND1-215ENST00000512807 NACADO15069 1562 aa25.93■■□□□ 1.74
PLXND1-215ENST00000512807 RB1CC1Q8TDY2 1594 aa25.73■■□□□ 1.71
PLXND1-215ENST00000512807 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
PLXND1-215ENST00000512807 SCRIBQ14160 1630 aa25.43■■□□□ 1.66
PLXND1-215ENST00000512807 UNC13AQ9UPW8 1703 aa25.03■■□□□ 1.6
PLXND1-215ENST00000512807 BICRAQ9NZM4 1560 aa24.78■■□□□ 1.56
PLXND1-215ENST00000512807 SUPT5HO00267 1087 aaKnown RBP24.69■■□□□ 1.54
PLXND1-215ENST00000512807 PABPN1Q86U42 306 aaKnown RBP eCLIP24.64■■□□□ 1.54
PLXND1-215ENST00000512807 BAZ1AQ9NRL2 1556 aaPredicted RBP24.58■■□□□ 1.52
PLXND1-215ENST00000512807 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
PLXND1-215ENST00000512807 RSF1Q96T23 1441 aaPredicted RBP24.52■■□□□ 1.52
PLXND1-215ENST00000512807 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
PLXND1-215ENST00000512807 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
PLXND1-215ENST00000512807 WIZO95785 1651 aa24.22■■□□□ 1.47
PLXND1-215ENST00000512807 PEG3Q9GZU2 1588 aa24.15■■□□□ 1.46
PLXND1-215ENST00000512807 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
PLXND1-215ENST00000512807 EIF4G1Q04637 1599 aaKnown RBP24.11■■□□□ 1.45
PLXND1-215ENST00000512807 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
PLXND1-215ENST00000512807 ATAD2BQ9ULI0 1458 aa24.01■■□□□ 1.43
PLXND1-215ENST00000512807 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
PLXND1-215ENST00000512807 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
PLXND1-215ENST00000512807 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
PLXND1-215ENST00000512807 CC2D2AQ9P2K1 1620 aa23.78■■□□□ 1.4
PLXND1-215ENST00000512807 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
PLXND1-215ENST00000512807 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
PLXND1-215ENST00000512807 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
PLXND1-215ENST00000512807 TRIM41Q8WV44 630 aa23.32■■□□□ 1.32
PLXND1-215ENST00000512807 CFTRP13569 1480 aa23.3■■□□□ 1.32
PLXND1-215ENST00000512807 CADPSQ9ULU8 1353 aa23.24■■□□□ 1.31
PLXND1-215ENST00000512807 PRDM2Q13029 1718 aa23.23■■□□□ 1.31
PLXND1-215ENST00000512807 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
PLXND1-215ENST00000512807 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
PLXND1-215ENST00000512807 LAMC3Q9Y6N6 1575 aa23.13■■□□□ 1.29
PLXND1-215ENST00000512807 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
PLXND1-215ENST00000512807 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
PLXND1-215ENST00000512807 FANCD2Q9BXW9 1451 aa22.98■■□□□ 1.27
PLXND1-215ENST00000512807 BIVM-ERCC5R4GMW8 1640 aa22.97■■□□□ 1.27
PLXND1-215ENST00000512807 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
PLXND1-215ENST00000512807 NESP48681 1621 aa22.93■■□□□ 1.26
PLXND1-215ENST00000512807 EEA1Q15075 1411 aa22.91■■□□□ 1.26
PLXND1-215ENST00000512807 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.25
PLXND1-215ENST00000512807 CUX1P39880 1505 aa22.87■■□□□ 1.25
PLXND1-215ENST00000512807 DNMBPQ6XZF7 1577 aa22.8■■□□□ 1.24
PLXND1-215ENST00000512807 FAM9AQ8IZU1 332 aaPredicted RBP22.77■■□□□ 1.24
PLXND1-215ENST00000512807 KIF21AQ7Z4S6 1674 aa22.73■■□□□ 1.23
PLXND1-215ENST00000512807 SOGA1O94964 1423 aa22.71■■□□□ 1.23
PLXND1-215ENST00000512807 TOPBP1Q92547 1522 aa22.7■■□□□ 1.22
PLXND1-215ENST00000512807 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
PLXND1-215ENST00000512807 CSRNP3Q8WYN3 585 aa22.64■■□□□ 1.21
PLXND1-215ENST00000512807 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
PLXND1-215ENST00000512807 MRC2Q9UBG0 1479 aa22.64■■□□□ 1.21
PLXND1-215ENST00000512807 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
PLXND1-215ENST00000512807 KIF27Q86VH2 1401 aa22.63■■□□□ 1.21
PLXND1-215ENST00000512807 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
PLXND1-215ENST00000512807 RUSC2Q8N2Y8 1516 aa22.57■■□□□ 1.2
PLXND1-215ENST00000512807 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
PLXND1-215ENST00000512807 CUX2O14529 1486 aa22.53■■□□□ 1.2
PLXND1-215ENST00000512807 KIF21BO75037 1637 aa22.52■■□□□ 1.2
PLXND1-215ENST00000512807 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.19
PLXND1-215ENST00000512807 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
PLXND1-215ENST00000512807 WDR62O43379 1518 aa22.5■■□□□ 1.19
PLXND1-215ENST00000512807 RAD54L2Q9Y4B4 1467 aa22.43■■□□□ 1.18
PLXND1-215ENST00000512807 THOC2Q8NI27 1593 aaKnown RBP22.42■■□□□ 1.18
PLXND1-215ENST00000512807 WDR97A6NE52 1622 aa22.42■■□□□ 1.18
PLXND1-215ENST00000512807 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
PLXND1-215ENST00000512807 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
PLXND1-215ENST00000512807 IFT140Q96RY7 1462 aa22.37■■□□□ 1.17
PLXND1-215ENST00000512807 PRXQ9BXM0 1461 aa22.37■■□□□ 1.17
PLXND1-215ENST00000512807 EHMT2Q96KQ7 1210 aa22.37■■□□□ 1.17
PLXND1-215ENST00000512807 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
PLXND1-215ENST00000512807 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
PLXND1-215ENST00000512807 IGF1RP08069 1367 aa22.32■■□□□ 1.16
PLXND1-215ENST00000512807 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
PLXND1-215ENST00000512807 CUL7Q14999 1698 aa22.3■■□□□ 1.16
PLXND1-215ENST00000512807 GAPVD1Q14C86 1478 aa22.29■■□□□ 1.16
PLXND1-215ENST00000512807 RAPGEF2Q9Y4G8 1499 aa22.29■■□□□ 1.16
PLXND1-215ENST00000512807 CARMIL1Q5VZK9 1371 aa22.26■■□□□ 1.15
PLXND1-215ENST00000512807 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
PLXND1-215ENST00000512807 CEP162Q5TB80 1403 aa22.22■■□□□ 1.15
PLXND1-215ENST00000512807 PBRM1Q86U86 1689 aa22.17■■□□□ 1.14
PLXND1-215ENST00000512807 GRIN2BQ13224 1484 aa22.17■■□□□ 1.14
PLXND1-215ENST00000512807 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.13
PLXND1-215ENST00000512807 EIF4G3O43432 1585 aaKnown RBP22.1■■□□□ 1.13
PLXND1-215ENST00000512807 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
PLXND1-215ENST00000512807 CLIP1P30622 1438 aa22.09■■□□□ 1.13
PLXND1-215ENST00000512807 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.13
PLXND1-215ENST00000512807 ADAMTS12P58397 1594 aa22.05■■□□□ 1.12
PLXND1-215ENST00000512807 MAGI1Q96QZ7 1491 aaPredicted RBP22.02■■□□□ 1.12
PLXND1-215ENST00000512807 CTTNBP2Q8WZ74 1663 aa21.99■■□□□ 1.11
PLXND1-215ENST00000512807 SNAPC4Q5SXM2 1469 aa21.97■■□□□ 1.11
PLXND1-215ENST00000512807 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
PLXND1-215ENST00000512807 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
PLXND1-215ENST00000512807 SYNJ2O15056 1496 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms