RNA–Protein interactions for RNA: ENST00000512794.1

LINC01438-201, Transcript of long intergenic non-protein coding RNA 1438, humanhuman

TSL 4 BASIC

Gene LINC01438, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01438-201ENST00000512794 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.77
LINC01438-201ENST00000512794 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
LINC01438-201ENST00000512794 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
LINC01438-201ENST00000512794 CHIC1Q5VXU3 224 aa16.77■□□□□ 0.28
LINC01438-201ENST00000512794 ZCCHC6Q5VYS8 1495 aaKnown RBP16.72■□□□□ 0.27
LINC01438-201ENST00000512794 DCAF1Q9Y4B6 1507 aa16.54■□□□□ 0.24
LINC01438-201ENST00000512794 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
LINC01438-201ENST00000512794 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
LINC01438-201ENST00000512794 ABCC9O60706 1549 aa16.27■□□□□ 0.2
LINC01438-201ENST00000512794 NACADO15069 1562 aa16.18■□□□□ 0.18
LINC01438-201ENST00000512794 SHROOM4Q9ULL8 1493 aa16.12■□□□□ 0.17
LINC01438-201ENST00000512794 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
LINC01438-201ENST00000512794 SCRIBQ14160 1630 aa15.85■□□□□ 0.13
LINC01438-201ENST00000512794 SUPT5HO00267 1087 aaKnown RBP15.59■□□□□ 0.09
LINC01438-201ENST00000512794 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
LINC01438-201ENST00000512794 BICRAQ9NZM4 1560 aa15.44■□□□□ 0.06
LINC01438-201ENST00000512794 RSF1Q96T23 1441 aaPredicted RBP15.43■□□□□ 0.06
LINC01438-201ENST00000512794 BAZ1AQ9NRL2 1556 aaPredicted RBP15.39■□□□□ 0.05
LINC01438-201ENST00000512794 CECR2Q9BXF3 1484 aa15.38■□□□□ 0.05
LINC01438-201ENST00000512794 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
LINC01438-201ENST00000512794 MROH2BQ7Z745 1585 aa15.31■□□□□ 0.04
LINC01438-201ENST00000512794 SMARCA4P51532 1647 aa15.25■□□□□ 0.03
LINC01438-201ENST00000512794 WIZO95785 1651 aa15.16■□□□□ 0.02
LINC01438-201ENST00000512794 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
LINC01438-201ENST00000512794 TOP2AP11388 1531 aaKnown RBP15.08■□□□□ 0.01
LINC01438-201ENST00000512794 SENP3Q9H4L4 574 aaPredicted RBP15.06■□□□□ 0
LINC01438-201ENST00000512794 SMARCA2P51531 1590 aa15.06■□□□□ 0
LINC01438-201ENST00000512794 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
LINC01438-201ENST00000512794 EIF4G1Q04637 1599 aaKnown RBP15□□□□□ -0.01
LINC01438-201ENST00000512794 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
LINC01438-201ENST00000512794 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
LINC01438-201ENST00000512794 CCDC88BA6NC98 1476 aa14.91□□□□□ -0.02
LINC01438-201ENST00000512794 HMGXB3Q12766 1538 aa14.9□□□□□ -0.02
LINC01438-201ENST00000512794 PHF23Q9BUL5 403 aaPredicted RBP14.88□□□□□ -0.03
LINC01438-201ENST00000512794 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
LINC01438-201ENST00000512794 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
LINC01438-201ENST00000512794 CFTRP13569 1480 aa14.59□□□□□ -0.07
LINC01438-201ENST00000512794 CADPSQ9ULU8 1353 aa14.55□□□□□ -0.08
LINC01438-201ENST00000512794 WRNQ14191 1432 aaPredicted RBP eCLIP14.55□□□□□ -0.08
LINC01438-201ENST00000512794 ABCC8Q09428 1581 aa14.53□□□□□ -0.08
LINC01438-201ENST00000512794 EEA1Q15075 1411 aa14.46□□□□□ -0.09
LINC01438-201ENST00000512794 PRDM2Q13029 1718 aa14.46□□□□□ -0.1
LINC01438-201ENST00000512794 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
LINC01438-201ENST00000512794 SYNJ1O43426 1573 aa14.4□□□□□ -0.1
LINC01438-201ENST00000512794 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
LINC01438-201ENST00000512794 BIVM-ERCC5R4GMW8 1640 aa14.38□□□□□ -0.11
LINC01438-201ENST00000512794 FAM9AQ8IZU1 332 aaPredicted RBP14.36□□□□□ -0.11
LINC01438-201ENST00000512794 LOC105371045A0A1W2PR82 267 aa14.35□□□□□ -0.11
LINC01438-201ENST00000512794 FANCD2Q9BXW9 1451 aa14.34□□□□□ -0.11
LINC01438-201ENST00000512794 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
LINC01438-201ENST00000512794 CUX1P39880 1505 aa14.32□□□□□ -0.12
LINC01438-201ENST00000512794 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
LINC01438-201ENST00000512794 SOGA1O94964 1423 aa14.31□□□□□ -0.12
LINC01438-201ENST00000512794 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
LINC01438-201ENST00000512794 NESP48681 1621 aa14.27□□□□□ -0.12
LINC01438-201ENST00000512794 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
LINC01438-201ENST00000512794 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
LINC01438-201ENST00000512794 RUSC2Q8N2Y8 1516 aa14.22□□□□□ -0.13
LINC01438-201ENST00000512794 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
LINC01438-201ENST00000512794 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
LINC01438-201ENST00000512794 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
LINC01438-201ENST00000512794 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
LINC01438-201ENST00000512794 KIF21BO75037 1637 aa14.17□□□□□ -0.14
LINC01438-201ENST00000512794 TNIKQ9UKE5 1360 aa14.17□□□□□ -0.14
LINC01438-201ENST00000512794 URB2Q14146 1524 aaKnown RBP14.12□□□□□ -0.15
LINC01438-201ENST00000512794 CUX2O14529 1486 aa14.11□□□□□ -0.15
LINC01438-201ENST00000512794 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
LINC01438-201ENST00000512794 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
LINC01438-201ENST00000512794 UBTFP17480 764 aaKnown RBP14.1□□□□□ -0.15
LINC01438-201ENST00000512794 PRXQ9BXM0 1461 aa14.1□□□□□ -0.15
LINC01438-201ENST00000512794 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
LINC01438-201ENST00000512794 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
LINC01438-201ENST00000512794 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
LINC01438-201ENST00000512794 EHMT2Q96KQ7 1210 aa14.08□□□□□ -0.16
LINC01438-201ENST00000512794 IGF1RP08069 1367 aa14.06□□□□□ -0.16
LINC01438-201ENST00000512794 FOXD1Q16676 465 aa14.05□□□□□ -0.16
LINC01438-201ENST00000512794 CEP162Q5TB80 1403 aa14.03□□□□□ -0.16
LINC01438-201ENST00000512794 RAD54L2Q9Y4B4 1467 aa14.03□□□□□ -0.16
LINC01438-201ENST00000512794 RAPGEF2Q9Y4G8 1499 aa14.03□□□□□ -0.16
LINC01438-201ENST00000512794 WDR62O43379 1518 aa14□□□□□ -0.17
LINC01438-201ENST00000512794 ERCC6Q03468 1493 aa14□□□□□ -0.17
LINC01438-201ENST00000512794 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
LINC01438-201ENST00000512794 WDR97A6NE52 1622 aa13.97□□□□□ -0.17
LINC01438-201ENST00000512794 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
LINC01438-201ENST00000512794 CUL7Q14999 1698 aa13.95□□□□□ -0.18
LINC01438-201ENST00000512794 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
LINC01438-201ENST00000512794 TARBP1Q13395 1621 aaKnown RBP13.94□□□□□ -0.18
LINC01438-201ENST00000512794 CLIP1P30622 1438 aa13.93□□□□□ -0.18
LINC01438-201ENST00000512794 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
LINC01438-201ENST00000512794 TDRD9Q8NDG6 1382 aaKnown RBP13.91□□□□□ -0.18
LINC01438-201ENST00000512794 THOC2Q8NI27 1593 aaKnown RBP13.9□□□□□ -0.18
LINC01438-201ENST00000512794 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
LINC01438-201ENST00000512794 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
LINC01438-201ENST00000512794 VPS8Q8N3P4 1428 aa13.83□□□□□ -0.2
LINC01438-201ENST00000512794 FHAD1B1AJZ9 1412 aa13.82□□□□□ -0.2
LINC01438-201ENST00000512794 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC01438-201ENST00000512794 PBRM1Q86U86 1689 aa13.79□□□□□ -0.2
LINC01438-201ENST00000512794 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
LINC01438-201ENST00000512794 ZNF608Q9ULD9 1512 aaPredicted RBP13.76□□□□□ -0.21
LINC01438-201ENST00000512794 APLP2Q06481 763 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms