RNA–Protein interactions for RNA: ENST00000512578.1

PTGER4-203, Transcript of prostaglandin E receptor 4, humanhuman

TSL 1 (best)

Gene PTGER4, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER4-203ENST00000512578 NISCHQ9Y2I1 1504 aa39.3■■■■□ 3.88
PTGER4-203ENST00000512578 CCDC180Q9P1Z9 1646 aa34.97■■■■□ 3.19
PTGER4-203ENST00000512578 ABCC9O60706 1549 aa34.86■■■■□ 3.17
PTGER4-203ENST00000512578 DCAF8L2P0C7V8 631 aa33.44■■■□□ 2.94
PTGER4-203ENST00000512578 RB1CC1Q8TDY2 1594 aa33.22■■■□□ 2.91
PTGER4-203ENST00000512578 NACADO15069 1562 aa33.05■■■□□ 2.88
PTGER4-203ENST00000512578 ZCCHC6Q5VYS8 1495 aaKnown RBP32.79■■■□□ 2.84
PTGER4-203ENST00000512578 PABPN1Q86U42 306 aaKnown RBP eCLIP32.64■■■□□ 2.82
PTGER4-203ENST00000512578 MYO15BQ96JP2 1530 aa32.61■■■□□ 2.81
PTGER4-203ENST00000512578 DCAF1Q9Y4B6 1507 aa32.41■■■□□ 2.78
PTGER4-203ENST00000512578 DNAJC5BQ9UF47 199 aa32.35■■■□□ 2.77
PTGER4-203ENST00000512578 UNC13AQ9UPW8 1703 aa32.33■■■□□ 2.77
PTGER4-203ENST00000512578 BICRAQ9NZM4 1560 aa32.16■■■□□ 2.74
PTGER4-203ENST00000512578 SCRIBQ14160 1630 aa32.08■■■□□ 2.73
PTGER4-203ENST00000512578 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
PTGER4-203ENST00000512578 EIF4G1Q04637 1599 aaKnown RBP31.4■■■□□ 2.62
PTGER4-203ENST00000512578 CC2D2AQ9P2K1 1620 aa31.39■■■□□ 2.62
PTGER4-203ENST00000512578 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
PTGER4-203ENST00000512578 SMARCA4P51532 1647 aa30.55■■■□□ 2.48
PTGER4-203ENST00000512578 NCAPD3P42695 1498 aa30.53■■■□□ 2.48
PTGER4-203ENST00000512578 ATAD2BQ9ULI0 1458 aa30.52■■■□□ 2.48
PTGER4-203ENST00000512578 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
PTGER4-203ENST00000512578 SMARCA2P51531 1590 aa30.45■■■□□ 2.46
PTGER4-203ENST00000512578 MROH2BQ7Z745 1585 aa30.4■■■□□ 2.46
PTGER4-203ENST00000512578 BAZ1BQ9UIG0 1483 aaKnown RBP30.31■■■□□ 2.44
PTGER4-203ENST00000512578 HMGXB3Q12766 1538 aa30.28■■■□□ 2.44
PTGER4-203ENST00000512578 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
PTGER4-203ENST00000512578 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
PTGER4-203ENST00000512578 WIZO95785 1651 aa30.11■■■□□ 2.41
PTGER4-203ENST00000512578 NESP48681 1621 aa30.01■■■□□ 2.39
PTGER4-203ENST00000512578 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
PTGER4-203ENST00000512578 LAMC3Q9Y6N6 1575 aa29.77■■■□□ 2.36
PTGER4-203ENST00000512578 CUX2O14529 1486 aa29.75■■■□□ 2.35
PTGER4-203ENST00000512578 CADPSQ9ULU8 1353 aa29.7■■■□□ 2.35
PTGER4-203ENST00000512578 PDS5BQ9NTI5 1447 aa29.7■■■□□ 2.34
PTGER4-203ENST00000512578 TOP2AP11388 1531 aaKnown RBP29.67■■■□□ 2.34
PTGER4-203ENST00000512578 KIF21AQ7Z4S6 1674 aa29.53■■■□□ 2.32
PTGER4-203ENST00000512578 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
PTGER4-203ENST00000512578 DNAJC5Q9H3Z4 198 aa29.42■■■□□ 2.3
PTGER4-203ENST00000512578 CFTRP13569 1480 aa29.37■■■□□ 2.29
PTGER4-203ENST00000512578 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
PTGER4-203ENST00000512578 FANCD2Q9BXW9 1451 aa29.36■■■□□ 2.29
PTGER4-203ENST00000512578 CEP164Q9UPV0 1460 aa29.36■■■□□ 2.29
PTGER4-203ENST00000512578 CCDC88BA6NC98 1476 aa29.36■■■□□ 2.29
PTGER4-203ENST00000512578 SUPT5HO00267 1087 aaKnown RBP29.35■■■□□ 2.29
PTGER4-203ENST00000512578 WDR62O43379 1518 aa29.2■■■□□ 2.27
PTGER4-203ENST00000512578 PRDM2Q13029 1718 aa29.07■■■□□ 2.24
PTGER4-203ENST00000512578 URB2Q14146 1524 aaKnown RBP29.05■■■□□ 2.24
PTGER4-203ENST00000512578 TOPBP1Q92547 1522 aa28.82■■■□□ 2.2
PTGER4-203ENST00000512578 ABCC8Q09428 1581 aa28.78■■■□□ 2.2
PTGER4-203ENST00000512578 IFT140Q96RY7 1462 aa28.74■■■□□ 2.19
PTGER4-203ENST00000512578 DNMBPQ6XZF7 1577 aa28.71■■■□□ 2.19
PTGER4-203ENST00000512578 ZNF608Q9ULD9 1512 aaPredicted RBP28.67■■■□□ 2.18
PTGER4-203ENST00000512578 OSCARQ8IYS5 282 aa28.66■■■□□ 2.18
PTGER4-203ENST00000512578 POLA1P09884 1462 aaPredicted RBP28.55■■■□□ 2.16
PTGER4-203ENST00000512578 SOGA1O94964 1423 aa28.52■■■□□ 2.16
PTGER4-203ENST00000512578 AQRO60306 1485 aaKnown RBP eCLIP28.52■■■□□ 2.16
PTGER4-203ENST00000512578 RAD54L2Q9Y4B4 1467 aa28.52■■■□□ 2.16
PTGER4-203ENST00000512578 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
PTGER4-203ENST00000512578 CUX1P39880 1505 aa28.49■■■□□ 2.15
PTGER4-203ENST00000512578 FBLN2P98095 1184 aa28.47■■■□□ 2.15
PTGER4-203ENST00000512578 EIF4G3O43432 1585 aaKnown RBP28.46■■■□□ 2.15
PTGER4-203ENST00000512578 TDRD9Q8NDG6 1382 aaKnown RBP28.46■■■□□ 2.15
PTGER4-203ENST00000512578 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
PTGER4-203ENST00000512578 TARBP1Q13395 1621 aaKnown RBP28.45■■■□□ 2.14
PTGER4-203ENST00000512578 SYNJ1O43426 1573 aa28.32■■■□□ 2.12
PTGER4-203ENST00000512578 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
PTGER4-203ENST00000512578 WRNQ14191 1432 aaPredicted RBP eCLIP28.24■■■□□ 2.11
PTGER4-203ENST00000512578 CHMP7Q8WUX9 453 aaPredicted RBP28.23■■■□□ 2.11
PTGER4-203ENST00000512578 SNAPC4Q5SXM2 1469 aa28.21■■■□□ 2.11
PTGER4-203ENST00000512578 TOP2BQ02880 1626 aa28.2■■■□□ 2.1
PTGER4-203ENST00000512578 WDR97A6NE52 1622 aa28.18■■■□□ 2.1
PTGER4-203ENST00000512578 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
PTGER4-203ENST00000512578 CHD1O14646 1710 aa28.16■■■□□ 2.1
PTGER4-203ENST00000512578 GAPVD1Q14C86 1478 aa28.14■■■□□ 2.09
PTGER4-203ENST00000512578 ABCA10Q8WWZ4 1543 aa28.09■■■□□ 2.09
PTGER4-203ENST00000512578 MAGI1Q96QZ7 1491 aaPredicted RBP28.08■■■□□ 2.09
PTGER4-203ENST00000512578 RIMBP3CA6NJZ7 1639 aa28.07■■■□□ 2.08
PTGER4-203ENST00000512578 RIMBP3BA6NNM3 1639 aa28.07■■■□□ 2.08
PTGER4-203ENST00000512578 RIMBP3Q9UFD9 1639 aa28.07■■■□□ 2.08
PTGER4-203ENST00000512578 ARHGEF11O15085 1522 aa28.04■■■□□ 2.08
PTGER4-203ENST00000512578 CYB5RLQ6IPT4 315 aa28.03■■■□□ 2.08
PTGER4-203ENST00000512578 SYNJ2O15056 1496 aa28.01■■■□□ 2.07
PTGER4-203ENST00000512578 PBRM1Q86U86 1689 aa27.98■■■□□ 2.07
PTGER4-203ENST00000512578 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
PTGER4-203ENST00000512578 CLASP1Q7Z460 1538 aa27.82■■■□□ 2.04
PTGER4-203ENST00000512578 FHAD1B1AJZ9 1412 aa27.79■■■□□ 2.04
PTGER4-203ENST00000512578 GRIN2AQ12879 1464 aa27.78■■■□□ 2.04
PTGER4-203ENST00000512578 ARAP1Q96P48 1450 aa27.78■■■□□ 2.04
PTGER4-203ENST00000512578 ADAMTS12P58397 1594 aa27.75■■■□□ 2.03
PTGER4-203ENST00000512578 ERICH3Q5RHP9 1530 aa27.74■■■□□ 2.03
PTGER4-203ENST00000512578 TRHP20396 242 aaPredicted RBP27.68■■■□□ 2.02
PTGER4-203ENST00000512578 KIF27Q86VH2 1401 aa27.67■■■□□ 2.02
PTGER4-203ENST00000512578 RUSC2Q8N2Y8 1516 aa27.63■■■□□ 2.01
PTGER4-203ENST00000512578 CEP170Q5SW79 1584 aa27.63■■■□□ 2.01
PTGER4-203ENST00000512578 NUP160Q12769 1436 aa27.62■■■□□ 2.01
PTGER4-203ENST00000512578 IGF1RP08069 1367 aa27.58■■■□□ 2.01
PTGER4-203ENST00000512578 JPH4Q96JJ6 628 aa27.53■■■□□ 2
PTGER4-203ENST00000512578 ERCC6L2Q5T890 1561 aa27.5■■□□□ 1.99
PTGER4-203ENST00000512578 PRG4Q92954 1404 aaPredicted RBP27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms