RNA–Protein interactions for RNA: ENST00000512487.1

LINC00290-201, long intergenic non-protein coding RNA 290, humanhuman

TSL 1 (best) BASIC

Gene LINC00290, Length 593 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00290-201ENST00000512487 NISCHQ9Y2I1 1504 aa27.87■■■□□ 2.05
LINC00290-201ENST00000512487 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
LINC00290-201ENST00000512487 ABCC9O60706 1549 aa23.66■■□□□ 1.38
LINC00290-201ENST00000512487 ZCCHC6Q5VYS8 1495 aaKnown RBP23.27■■□□□ 1.32
LINC00290-201ENST00000512487 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
LINC00290-201ENST00000512487 DCAF1Q9Y4B6 1507 aa23.2■■□□□ 1.3
LINC00290-201ENST00000512487 NACADO15069 1562 aa23.18■■□□□ 1.3
LINC00290-201ENST00000512487 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
LINC00290-201ENST00000512487 RB1CC1Q8TDY2 1594 aa23.08■■□□□ 1.29
LINC00290-201ENST00000512487 SCRIBQ14160 1630 aa22.36■■□□□ 1.17
LINC00290-201ENST00000512487 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
LINC00290-201ENST00000512487 UNC13AQ9UPW8 1703 aa22.26■■□□□ 1.15
LINC00290-201ENST00000512487 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
LINC00290-201ENST00000512487 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
LINC00290-201ENST00000512487 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
LINC00290-201ENST00000512487 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
LINC00290-201ENST00000512487 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.04
LINC00290-201ENST00000512487 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
LINC00290-201ENST00000512487 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
LINC00290-201ENST00000512487 CC2D2AQ9P2K1 1620 aa21.44■■□□□ 1.02
LINC00290-201ENST00000512487 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
LINC00290-201ENST00000512487 PEG3Q9GZU2 1588 aa21.36■■□□□ 1.01
LINC00290-201ENST00000512487 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
LINC00290-201ENST00000512487 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
LINC00290-201ENST00000512487 RSF1Q96T23 1441 aaPredicted RBP21.34■■□□□ 1.01
LINC00290-201ENST00000512487 DNAJC5BQ9UF47 199 aa21.31■■□□□ 1
LINC00290-201ENST00000512487 HMGXB3Q12766 1538 aa21.26■□□□□ 0.99
LINC00290-201ENST00000512487 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
LINC00290-201ENST00000512487 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
LINC00290-201ENST00000512487 WIZO95785 1651 aa21.11■□□□□ 0.97
LINC00290-201ENST00000512487 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
LINC00290-201ENST00000512487 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
LINC00290-201ENST00000512487 CCDC88BA6NC98 1476 aa20.78■□□□□ 0.92
LINC00290-201ENST00000512487 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
LINC00290-201ENST00000512487 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
LINC00290-201ENST00000512487 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
LINC00290-201ENST00000512487 CFTRP13569 1480 aa20.68■□□□□ 0.9
LINC00290-201ENST00000512487 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
LINC00290-201ENST00000512487 NESP48681 1621 aa20.5■□□□□ 0.87
LINC00290-201ENST00000512487 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
LINC00290-201ENST00000512487 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
LINC00290-201ENST00000512487 CEP164Q9UPV0 1460 aa20.43■□□□□ 0.86
LINC00290-201ENST00000512487 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
LINC00290-201ENST00000512487 MRC2Q9UBG0 1479 aa20.32■□□□□ 0.84
LINC00290-201ENST00000512487 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
LINC00290-201ENST00000512487 CUX2O14529 1486 aa20.24■□□□□ 0.83
LINC00290-201ENST00000512487 WDR62O43379 1518 aa20.2■□□□□ 0.82
LINC00290-201ENST00000512487 WRNQ14191 1432 aaPredicted RBP eCLIP20.18■□□□□ 0.82
LINC00290-201ENST00000512487 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
LINC00290-201ENST00000512487 THOC2Q8NI27 1593 aaKnown RBP20.17■□□□□ 0.82
LINC00290-201ENST00000512487 TOPBP1Q92547 1522 aa20.14■□□□□ 0.81
LINC00290-201ENST00000512487 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
LINC00290-201ENST00000512487 CUX1P39880 1505 aa20.04■□□□□ 0.8
LINC00290-201ENST00000512487 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
LINC00290-201ENST00000512487 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
LINC00290-201ENST00000512487 TRIM41Q8WV44 630 aa20.01■□□□□ 0.79
LINC00290-201ENST00000512487 BIVM-ERCC5R4GMW8 1640 aa20■□□□□ 0.79
LINC00290-201ENST00000512487 SOGA1O94964 1423 aa20■□□□□ 0.79
LINC00290-201ENST00000512487 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
LINC00290-201ENST00000512487 FGD5Q6ZNL6 1462 aa19.97■□□□□ 0.79
LINC00290-201ENST00000512487 WDR97A6NE52 1622 aa19.93■□□□□ 0.78
LINC00290-201ENST00000512487 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
LINC00290-201ENST00000512487 ABCA10Q8WWZ4 1543 aa19.88■□□□□ 0.77
LINC00290-201ENST00000512487 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
LINC00290-201ENST00000512487 TARBP1Q13395 1621 aaKnown RBP19.83■□□□□ 0.76
LINC00290-201ENST00000512487 RAD54L2Q9Y4B4 1467 aa19.82■□□□□ 0.76
LINC00290-201ENST00000512487 KIF27Q86VH2 1401 aa19.81■□□□□ 0.76
LINC00290-201ENST00000512487 EEA1Q15075 1411 aa19.76■□□□□ 0.75
LINC00290-201ENST00000512487 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
LINC00290-201ENST00000512487 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
LINC00290-201ENST00000512487 GRIN2BQ13224 1484 aa19.74■□□□□ 0.75
LINC00290-201ENST00000512487 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
LINC00290-201ENST00000512487 AQRO60306 1485 aaKnown RBP eCLIP19.7■□□□□ 0.74
LINC00290-201ENST00000512487 ERICH3Q5RHP9 1530 aa19.68■□□□□ 0.74
LINC00290-201ENST00000512487 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
LINC00290-201ENST00000512487 EIF4G3O43432 1585 aaKnown RBP19.67■□□□□ 0.74
LINC00290-201ENST00000512487 ABCA5Q8WWZ7 1642 aa19.66■□□□□ 0.74
LINC00290-201ENST00000512487 IGF1RP08069 1367 aa19.6■□□□□ 0.73
LINC00290-201ENST00000512487 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
LINC00290-201ENST00000512487 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
LINC00290-201ENST00000512487 CSRNP3Q8WYN3 585 aa19.58■□□□□ 0.72
LINC00290-201ENST00000512487 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
LINC00290-201ENST00000512487 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
LINC00290-201ENST00000512487 CUL7Q14999 1698 aa19.54■□□□□ 0.72
LINC00290-201ENST00000512487 PBRM1Q86U86 1689 aa19.54■□□□□ 0.72
LINC00290-201ENST00000512487 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
LINC00290-201ENST00000512487 FBLN2P98095 1184 aa19.5■□□□□ 0.71
LINC00290-201ENST00000512487 OSCARQ8IYS5 282 aa19.5■□□□□ 0.71
LINC00290-201ENST00000512487 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
LINC00290-201ENST00000512487 ADAMTS12P58397 1594 aa19.45■□□□□ 0.7
LINC00290-201ENST00000512487 RUSC2Q8N2Y8 1516 aa19.43■□□□□ 0.7
LINC00290-201ENST00000512487 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
LINC00290-201ENST00000512487 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
LINC00290-201ENST00000512487 FAM9AQ8IZU1 332 aaPredicted RBP19.39■□□□□ 0.69
LINC00290-201ENST00000512487 NUP160Q12769 1436 aa19.34■□□□□ 0.69
LINC00290-201ENST00000512487 KIF21BO75037 1637 aa19.32■□□□□ 0.68
LINC00290-201ENST00000512487 CHD1O14646 1710 aa19.3■□□□□ 0.68
LINC00290-201ENST00000512487 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
LINC00290-201ENST00000512487 GOLGA3Q08378 1498 aa19.29■□□□□ 0.68
LINC00290-201ENST00000512487 UBTFP17480 764 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms