RNA–Protein interactions for RNA: ENST00000511949.5

SH3TC2-210, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 4

Gene SH3TC2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-210ENST00000511949 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
SH3TC2-210ENST00000511949 CCDC180Q9P1Z9 1646 aa26.31■■□□□ 1.8
SH3TC2-210ENST00000511949 ABCC9O60706 1549 aa25.7■■□□□ 1.7
SH3TC2-210ENST00000511949 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
SH3TC2-210ENST00000511949 RB1CC1Q8TDY2 1594 aa24.82■■□□□ 1.56
SH3TC2-210ENST00000511949 NACADO15069 1562 aa24.8■■□□□ 1.56
SH3TC2-210ENST00000511949 ZCCHC6Q5VYS8 1495 aaKnown RBP24.68■■□□□ 1.54
SH3TC2-210ENST00000511949 MYO15BQ96JP2 1530 aa24.65■■□□□ 1.54
SH3TC2-210ENST00000511949 DCAF1Q9Y4B6 1507 aa24.55■■□□□ 1.52
SH3TC2-210ENST00000511949 PABPN1Q86U42 306 aaKnown RBP eCLIP24.07■■□□□ 1.44
SH3TC2-210ENST00000511949 UNC13AQ9UPW8 1703 aa24.03■■□□□ 1.44
SH3TC2-210ENST00000511949 SCRIBQ14160 1630 aa24.02■■□□□ 1.44
SH3TC2-210ENST00000511949 BICRAQ9NZM4 1560 aa23.86■■□□□ 1.41
SH3TC2-210ENST00000511949 SHROOM4Q9ULL8 1493 aa23.83■■□□□ 1.41
SH3TC2-210ENST00000511949 DNAJC5BQ9UF47 199 aa23.42■■□□□ 1.34
SH3TC2-210ENST00000511949 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
SH3TC2-210ENST00000511949 CC2D2AQ9P2K1 1620 aa23.22■■□□□ 1.31
SH3TC2-210ENST00000511949 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
SH3TC2-210ENST00000511949 BAZ1AQ9NRL2 1556 aaPredicted RBP23.03■■□□□ 1.28
SH3TC2-210ENST00000511949 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
SH3TC2-210ENST00000511949 SMARCA2P51531 1590 aa22.9■■□□□ 1.26
SH3TC2-210ENST00000511949 NCAPD3P42695 1498 aa22.85■■□□□ 1.25
SH3TC2-210ENST00000511949 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
SH3TC2-210ENST00000511949 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
SH3TC2-210ENST00000511949 BAZ1BQ9UIG0 1483 aaKnown RBP22.74■■□□□ 1.23
SH3TC2-210ENST00000511949 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
SH3TC2-210ENST00000511949 PEG3Q9GZU2 1588 aa22.72■■□□□ 1.23
SH3TC2-210ENST00000511949 RSF1Q96T23 1441 aaPredicted RBP22.61■■□□□ 1.21
SH3TC2-210ENST00000511949 WIZO95785 1651 aa22.55■■□□□ 1.2
SH3TC2-210ENST00000511949 TOP2AP11388 1531 aaKnown RBP22.38■■□□□ 1.17
SH3TC2-210ENST00000511949 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
SH3TC2-210ENST00000511949 SUPT5HO00267 1087 aaKnown RBP22.26■■□□□ 1.15
SH3TC2-210ENST00000511949 LAMC3Q9Y6N6 1575 aa22.25■■□□□ 1.15
SH3TC2-210ENST00000511949 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
SH3TC2-210ENST00000511949 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
SH3TC2-210ENST00000511949 NESP48681 1621 aa22.19■■□□□ 1.14
SH3TC2-210ENST00000511949 CCDC88BA6NC98 1476 aa22.11■■□□□ 1.13
SH3TC2-210ENST00000511949 CFTRP13569 1480 aa22.07■■□□□ 1.12
SH3TC2-210ENST00000511949 CUX2O14529 1486 aa21.96■■□□□ 1.11
SH3TC2-210ENST00000511949 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
SH3TC2-210ENST00000511949 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
SH3TC2-210ENST00000511949 KIF21AQ7Z4S6 1674 aa21.91■■□□□ 1.1
SH3TC2-210ENST00000511949 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
SH3TC2-210ENST00000511949 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
SH3TC2-210ENST00000511949 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
SH3TC2-210ENST00000511949 WDR62O43379 1518 aa21.74■■□□□ 1.07
SH3TC2-210ENST00000511949 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
SH3TC2-210ENST00000511949 URB2Q14146 1524 aaKnown RBP21.64■■□□□ 1.05
SH3TC2-210ENST00000511949 TOPBP1Q92547 1522 aa21.57■■□□□ 1.04
SH3TC2-210ENST00000511949 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
SH3TC2-210ENST00000511949 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
SH3TC2-210ENST00000511949 SOGA1O94964 1423 aa21.4■■□□□ 1.02
SH3TC2-210ENST00000511949 WRNQ14191 1432 aaPredicted RBP eCLIP21.4■■□□□ 1.02
SH3TC2-210ENST00000511949 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
SH3TC2-210ENST00000511949 CUX1P39880 1505 aa21.39■■□□□ 1.01
SH3TC2-210ENST00000511949 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
SH3TC2-210ENST00000511949 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
SH3TC2-210ENST00000511949 TOP2BQ02880 1626 aa21.27■■□□□ 1
SH3TC2-210ENST00000511949 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
SH3TC2-210ENST00000511949 TARBP1Q13395 1621 aaKnown RBP21.26■□□□□ 0.99
SH3TC2-210ENST00000511949 WDR97A6NE52 1622 aa21.24■□□□□ 0.99
SH3TC2-210ENST00000511949 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
SH3TC2-210ENST00000511949 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
SH3TC2-210ENST00000511949 AQRO60306 1485 aaKnown RBP eCLIP21.22■□□□□ 0.99
SH3TC2-210ENST00000511949 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
SH3TC2-210ENST00000511949 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
SH3TC2-210ENST00000511949 DNAJC5Q9H3Z4 198 aa21.19■□□□□ 0.98
SH3TC2-210ENST00000511949 OSCARQ8IYS5 282 aa21.17■□□□□ 0.98
SH3TC2-210ENST00000511949 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
SH3TC2-210ENST00000511949 FBLN2P98095 1184 aa21.14■□□□□ 0.97
SH3TC2-210ENST00000511949 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
SH3TC2-210ENST00000511949 GAPVD1Q14C86 1478 aa21.13■□□□□ 0.97
SH3TC2-210ENST00000511949 CHMP7Q8WUX9 453 aaPredicted RBP21.09■□□□□ 0.97
SH3TC2-210ENST00000511949 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
SH3TC2-210ENST00000511949 MAGI1Q96QZ7 1491 aaPredicted RBP21.06■□□□□ 0.96
SH3TC2-210ENST00000511949 SNAPC4Q5SXM2 1469 aa21.04■□□□□ 0.96
SH3TC2-210ENST00000511949 KIF27Q86VH2 1401 aa21.01■□□□□ 0.95
SH3TC2-210ENST00000511949 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
SH3TC2-210ENST00000511949 PBRM1Q86U86 1689 aa20.98■□□□□ 0.95
SH3TC2-210ENST00000511949 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
SH3TC2-210ENST00000511949 ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
SH3TC2-210ENST00000511949 FHAD1B1AJZ9 1412 aa20.91■□□□□ 0.94
SH3TC2-210ENST00000511949 CHD1O14646 1710 aa20.89■□□□□ 0.93
SH3TC2-210ENST00000511949 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
SH3TC2-210ENST00000511949 IGF1RP08069 1367 aa20.82■□□□□ 0.92
SH3TC2-210ENST00000511949 GRIN2AQ12879 1464 aa20.81■□□□□ 0.92
SH3TC2-210ENST00000511949 CUL7Q14999 1698 aa20.77■□□□□ 0.92
SH3TC2-210ENST00000511949 CARMIL1Q5VZK9 1371 aa20.76■□□□□ 0.91
SH3TC2-210ENST00000511949 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
SH3TC2-210ENST00000511949 NUP160Q12769 1436 aa20.69■□□□□ 0.9
SH3TC2-210ENST00000511949 EEA1Q15075 1411 aa20.69■□□□□ 0.9
SH3TC2-210ENST00000511949 CLASP1Q7Z460 1538 aa20.67■□□□□ 0.9
SH3TC2-210ENST00000511949 ARHGEF11O15085 1522 aa20.65■□□□□ 0.9
SH3TC2-210ENST00000511949 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.89
SH3TC2-210ENST00000511949 CSRNP3Q8WYN3 585 aa20.64■□□□□ 0.89
SH3TC2-210ENST00000511949 RUSC2Q8N2Y8 1516 aa20.63■□□□□ 0.89
SH3TC2-210ENST00000511949 CEP170Q5SW79 1584 aa20.63■□□□□ 0.89
SH3TC2-210ENST00000511949 RIMBP3CA6NJZ7 1639 aa20.61■□□□□ 0.89
SH3TC2-210ENST00000511949 RIMBP3BA6NNM3 1639 aa20.61■□□□□ 0.89
SH3TC2-210ENST00000511949 RIMBP3Q9UFD9 1639 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms