RNA–Protein interactions for RNA: ENST00000511810.5

SDHA-214, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 3,001 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-214ENST00000511810 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
SDHA-214ENST00000511810 CCDC180Q9P1Z9 1646 aa18.78■□□□□ 0.6
SDHA-214ENST00000511810 ZCCHC6Q5VYS8 1495 aaKnown RBP18.43■□□□□ 0.54
SDHA-214ENST00000511810 SHROOM4Q9ULL8 1493 aa18.37■□□□□ 0.53
SDHA-214ENST00000511810 DCAF8L2P0C7V8 631 aa18.21■□□□□ 0.51
SDHA-214ENST00000511810 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
SDHA-214ENST00000511810 SUPT5HO00267 1087 aaKnown RBP17.84■□□□□ 0.45
SDHA-214ENST00000511810 ABCC9O60706 1549 aa17.68■□□□□ 0.42
SDHA-214ENST00000511810 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
SDHA-214ENST00000511810 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
SDHA-214ENST00000511810 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
SDHA-214ENST00000511810 NACADO15069 1562 aa17.43■□□□□ 0.38
SDHA-214ENST00000511810 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
SDHA-214ENST00000511810 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
SDHA-214ENST00000511810 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
SDHA-214ENST00000511810 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
SDHA-214ENST00000511810 MROH2BQ7Z745 1585 aa16.99■□□□□ 0.31
SDHA-214ENST00000511810 AEBP2Q6ZN18 517 aaPredicted RBP16.97■□□□□ 0.31
SDHA-214ENST00000511810 WIZO95785 1651 aa16.89■□□□□ 0.29
SDHA-214ENST00000511810 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
SDHA-214ENST00000511810 BAZ1AQ9NRL2 1556 aaPredicted RBP16.82■□□□□ 0.28
SDHA-214ENST00000511810 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
SDHA-214ENST00000511810 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
SDHA-214ENST00000511810 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
SDHA-214ENST00000511810 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
SDHA-214ENST00000511810 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
SDHA-214ENST00000511810 CCDC88BA6NC98 1476 aa16.53■□□□□ 0.24
SDHA-214ENST00000511810 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
SDHA-214ENST00000511810 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
SDHA-214ENST00000511810 FAM9AQ8IZU1 332 aaPredicted RBP16.5■□□□□ 0.23
SDHA-214ENST00000511810 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
SDHA-214ENST00000511810 ATAD2BQ9ULI0 1458 aa16.38■□□□□ 0.21
SDHA-214ENST00000511810 ABCC8Q09428 1581 aa16.38■□□□□ 0.21
SDHA-214ENST00000511810 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
SDHA-214ENST00000511810 BAZ1BQ9UIG0 1483 aaKnown RBP16.32■□□□□ 0.2
SDHA-214ENST00000511810 PCGF6Q9BYE7 350 aa16.27■□□□□ 0.2
SDHA-214ENST00000511810 SOGA1O94964 1423 aa16.14■□□□□ 0.17
SDHA-214ENST00000511810 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
SDHA-214ENST00000511810 NCAPD3P42695 1498 aa16.13■□□□□ 0.17
SDHA-214ENST00000511810 HMGXB3Q12766 1538 aa16.1■□□□□ 0.17
SDHA-214ENST00000511810 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
SDHA-214ENST00000511810 SYNJ1O43426 1573 aa16.08■□□□□ 0.16
SDHA-214ENST00000511810 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
SDHA-214ENST00000511810 HRCP23327 699 aa16.02■□□□□ 0.15
SDHA-214ENST00000511810 CSRNP3Q8WYN3 585 aa16.01■□□□□ 0.15
SDHA-214ENST00000511810 EEA1Q15075 1411 aa15.98■□□□□ 0.15
SDHA-214ENST00000511810 PPARGC1BQ86YN6 1023 aaKnown RBP15.93■□□□□ 0.14
SDHA-214ENST00000511810 CC2D2AQ9P2K1 1620 aa15.93■□□□□ 0.14
SDHA-214ENST00000511810 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
SDHA-214ENST00000511810 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
SDHA-214ENST00000511810 CFTRP13569 1480 aa15.9■□□□□ 0.14
SDHA-214ENST00000511810 CEP162Q5TB80 1403 aa15.89■□□□□ 0.13
SDHA-214ENST00000511810 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
SDHA-214ENST00000511810 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
SDHA-214ENST00000511810 GOLGA3Q08378 1498 aa15.86■□□□□ 0.13
SDHA-214ENST00000511810 CUX1P39880 1505 aa15.84■□□□□ 0.13
SDHA-214ENST00000511810 CEP164Q9UPV0 1460 aa15.81■□□□□ 0.12
SDHA-214ENST00000511810 KIF21BO75037 1637 aa15.8■□□□□ 0.12
SDHA-214ENST00000511810 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
SDHA-214ENST00000511810 PRDM2Q13029 1718 aa15.78■□□□□ 0.12
SDHA-214ENST00000511810 RAPGEF2Q9Y4G8 1499 aa15.77■□□□□ 0.11
SDHA-214ENST00000511810 TTBK1Q5TCY1 1321 aaPredicted RBP15.74■□□□□ 0.11
SDHA-214ENST00000511810 RANGAP1P46060 587 aaPredicted RBP15.69■□□□□ 0.1
SDHA-214ENST00000511810 CLIP1P30622 1438 aa15.67■□□□□ 0.1
SDHA-214ENST00000511810 KIF27Q86VH2 1401 aa15.66■□□□□ 0.1
SDHA-214ENST00000511810 NESP48681 1621 aa15.66■□□□□ 0.1
SDHA-214ENST00000511810 PRXQ9BXM0 1461 aa15.65■□□□□ 0.1
SDHA-214ENST00000511810 FANCD2Q9BXW9 1451 aa15.64■□□□□ 0.09
SDHA-214ENST00000511810 DNAJC5BQ9UF47 199 aa15.63■□□□□ 0.09
SDHA-214ENST00000511810 FGD5Q6ZNL6 1462 aa15.61■□□□□ 0.09
SDHA-214ENST00000511810 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
SDHA-214ENST00000511810 CUX2O14529 1486 aa15.59■□□□□ 0.09
SDHA-214ENST00000511810 VPS8Q8N3P4 1428 aa15.56■□□□□ 0.08
SDHA-214ENST00000511810 IGF1RP08069 1367 aa15.53■□□□□ 0.08
SDHA-214ENST00000511810 DNMBPQ6XZF7 1577 aa15.51■□□□□ 0.07
SDHA-214ENST00000511810 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
SDHA-214ENST00000511810 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
SDHA-214ENST00000511810 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
SDHA-214ENST00000511810 LAMC3Q9Y6N6 1575 aa15.5■□□□□ 0.07
SDHA-214ENST00000511810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
SDHA-214ENST00000511810 POLA1P09884 1462 aaPredicted RBP15.47■□□□□ 0.07
SDHA-214ENST00000511810 ARAP1Q96P48 1450 aa15.47■□□□□ 0.07
SDHA-214ENST00000511810 CARMIL1Q5VZK9 1371 aa15.45■□□□□ 0.06
SDHA-214ENST00000511810 APLP2Q06481 763 aa15.45■□□□□ 0.06
SDHA-214ENST00000511810 URB2Q14146 1524 aaKnown RBP15.44■□□□□ 0.06
SDHA-214ENST00000511810 ABCA10Q8WWZ4 1543 aa15.41■□□□□ 0.06
SDHA-214ENST00000511810 CCER1Q8TC90 406 aaPredicted RBP15.41■□□□□ 0.06
SDHA-214ENST00000511810 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
SDHA-214ENST00000511810 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
SDHA-214ENST00000511810 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
SDHA-214ENST00000511810 HNRNPUL2Q1KMD3 747 aaKnown RBP15.34■□□□□ 0.05
SDHA-214ENST00000511810 KANK4Q5T7N3 995 aaPredicted RBP15.34■□□□□ 0.05
SDHA-214ENST00000511810 TDRD9Q8NDG6 1382 aaKnown RBP15.33■□□□□ 0.04
SDHA-214ENST00000511810 WDR97A6NE52 1622 aa15.32■□□□□ 0.04
SDHA-214ENST00000511810 P3H3Q8IVL6 736 aa15.28■□□□□ 0.04
SDHA-214ENST00000511810 CUL7Q14999 1698 aa15.27■□□□□ 0.04
SDHA-214ENST00000511810 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
SDHA-214ENST00000511810 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
SDHA-214ENST00000511810 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
SDHA-214ENST00000511810 CTTNBP2Q8WZ74 1663 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms