RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 NISCHQ9Y2I1 1504 aa23.73■■□□□ 1.39
PTPN20-225ENST00000511769 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
PTPN20-225ENST00000511769 ABCC9O60706 1549 aa22.97■■□□□ 1.27
PTPN20-225ENST00000511769 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.2
PTPN20-225ENST00000511769 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
PTPN20-225ENST00000511769 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.08
PTPN20-225ENST00000511769 DNAJC5Q9H3Z4 198 aa21.49■■□□□ 1.03
PTPN20-225ENST00000511769 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
PTPN20-225ENST00000511769 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
PTPN20-225ENST00000511769 NACADO15069 1562 aa20.85■□□□□ 0.93
PTPN20-225ENST00000511769 UNC13AQ9UPW8 1703 aa20.8■□□□□ 0.92
PTPN20-225ENST00000511769 CECR2Q9BXF3 1484 aa20.79■□□□□ 0.92
PTPN20-225ENST00000511769 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
PTPN20-225ENST00000511769 CC2D2AQ9P2K1 1620 aa20.65■□□□□ 0.9
PTPN20-225ENST00000511769 DCAF8L2P0C7V8 631 aa20.61■□□□□ 0.89
PTPN20-225ENST00000511769 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
PTPN20-225ENST00000511769 SHROOM4Q9ULL8 1493 aa20.29■□□□□ 0.84
PTPN20-225ENST00000511769 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
PTPN20-225ENST00000511769 CUX2O14529 1486 aa20.21■□□□□ 0.83
PTPN20-225ENST00000511769 TRIM41Q8WV44 630 aa20.17■□□□□ 0.82
PTPN20-225ENST00000511769 MYO15BQ96JP2 1530 aa20.15■□□□□ 0.82
PTPN20-225ENST00000511769 PHF23Q9BUL5 403 aaPredicted RBP19.97■□□□□ 0.79
PTPN20-225ENST00000511769 ERCC6Q03468 1493 aa19.91■□□□□ 0.78
PTPN20-225ENST00000511769 SCRIBQ14160 1630 aa19.85■□□□□ 0.77
PTPN20-225ENST00000511769 DCAF1Q9Y4B6 1507 aa19.49■□□□□ 0.71
PTPN20-225ENST00000511769 ZCCHC6Q5VYS8 1495 aaKnown RBP19.43■□□□□ 0.7
PTPN20-225ENST00000511769 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
PTPN20-225ENST00000511769 NESP48681 1621 aa19.4■□□□□ 0.7
PTPN20-225ENST00000511769 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
PTPN20-225ENST00000511769 SMARCA2P51531 1590 aa19.24■□□□□ 0.67
PTPN20-225ENST00000511769 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
PTPN20-225ENST00000511769 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
PTPN20-225ENST00000511769 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.65
PTPN20-225ENST00000511769 ATAD2BQ9ULI0 1458 aa19.07■□□□□ 0.64
PTPN20-225ENST00000511769 LAMC3Q9Y6N6 1575 aa19.03■□□□□ 0.64
PTPN20-225ENST00000511769 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
PTPN20-225ENST00000511769 RIMBP3CA6NJZ7 1639 aa19■□□□□ 0.63
PTPN20-225ENST00000511769 RIMBP3BA6NNM3 1639 aa19■□□□□ 0.63
PTPN20-225ENST00000511769 RIMBP3Q9UFD9 1639 aa19■□□□□ 0.63
PTPN20-225ENST00000511769 PDS5BQ9NTI5 1447 aa18.97■□□□□ 0.63
PTPN20-225ENST00000511769 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
PTPN20-225ENST00000511769 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
PTPN20-225ENST00000511769 FOXD1Q16676 465 aa18.88■□□□□ 0.61
PTPN20-225ENST00000511769 WDR62O43379 1518 aa18.87■□□□□ 0.61
PTPN20-225ENST00000511769 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
PTPN20-225ENST00000511769 ARHGEF11O15085 1522 aa18.82■□□□□ 0.6
PTPN20-225ENST00000511769 SMARCA4P51532 1647 aa18.77■□□□□ 0.6
PTPN20-225ENST00000511769 CYB5RLQ6IPT4 315 aa18.76■□□□□ 0.59
PTPN20-225ENST00000511769 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
PTPN20-225ENST00000511769 ILDR1Q86SU0 546 aaPredicted RBP18.63■□□□□ 0.57
PTPN20-225ENST00000511769 CEP164Q9UPV0 1460 aa18.6■□□□□ 0.57
PTPN20-225ENST00000511769 ARAP1Q96P48 1450 aa18.57■□□□□ 0.56
PTPN20-225ENST00000511769 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
PTPN20-225ENST00000511769 FANCD2Q9BXW9 1451 aa18.47■□□□□ 0.55
PTPN20-225ENST00000511769 URB2Q14146 1524 aaKnown RBP18.38■□□□□ 0.53
PTPN20-225ENST00000511769 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
PTPN20-225ENST00000511769 RSF1Q96T23 1441 aaPredicted RBP18.31■□□□□ 0.52
PTPN20-225ENST00000511769 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
PTPN20-225ENST00000511769 CHD1O14646 1710 aa18.26■□□□□ 0.51
PTPN20-225ENST00000511769 IFT140Q96RY7 1462 aa18.25■□□□□ 0.51
PTPN20-225ENST00000511769 EIF4G3O43432 1585 aaKnown RBP18.2■□□□□ 0.5
PTPN20-225ENST00000511769 CFTRP13569 1480 aa18.19■□□□□ 0.5
PTPN20-225ENST00000511769 FBLN2P98095 1184 aa18.19■□□□□ 0.5
PTPN20-225ENST00000511769 AQRO60306 1485 aaKnown RBP eCLIP18.04■□□□□ 0.48
PTPN20-225ENST00000511769 WIZO95785 1651 aa18.03■□□□□ 0.48
PTPN20-225ENST00000511769 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.48
PTPN20-225ENST00000511769 KDM4FA0A1W2PPD8 638 aa17.98■□□□□ 0.47
PTPN20-225ENST00000511769 TOPBP1Q92547 1522 aa17.98■□□□□ 0.47
PTPN20-225ENST00000511769 GAPVD1Q14C86 1478 aa17.94■□□□□ 0.46
PTPN20-225ENST00000511769 SYNJ1O43426 1573 aa17.91■□□□□ 0.46
PTPN20-225ENST00000511769 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
PTPN20-225ENST00000511769 TARBP1Q13395 1621 aaKnown RBP17.89■□□□□ 0.45
PTPN20-225ENST00000511769 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
PTPN20-225ENST00000511769 SNAPC4Q5SXM2 1469 aa17.84■□□□□ 0.45
PTPN20-225ENST00000511769 CHMP7Q8WUX9 453 aaPredicted RBP17.83■□□□□ 0.44
PTPN20-225ENST00000511769 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
PTPN20-225ENST00000511769 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
PTPN20-225ENST00000511769 KIF13AQ9H1H9 1805 aa17.8■□□□□ 0.44
PTPN20-225ENST00000511769 ERCC6L2Q5T890 1561 aa17.77■□□□□ 0.43
PTPN20-225ENST00000511769 TDRD9Q8NDG6 1382 aaKnown RBP17.76■□□□□ 0.43
PTPN20-225ENST00000511769 MSH5O43196 834 aa17.75■□□□□ 0.43
PTPN20-225ENST00000511769 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
PTPN20-225ENST00000511769 FBXO41Q8TF61 875 aa17.72■□□□□ 0.43
PTPN20-225ENST00000511769 HECW2Q9P2P5 1572 aa17.71■□□□□ 0.43
PTPN20-225ENST00000511769 RAD54L2Q9Y4B4 1467 aa17.71■□□□□ 0.43
PTPN20-225ENST00000511769 TOP2AP11388 1531 aaKnown RBP17.71■□□□□ 0.43
PTPN20-225ENST00000511769 MAGI1Q96QZ7 1491 aaPredicted RBP17.7■□□□□ 0.42
PTPN20-225ENST00000511769 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
PTPN20-225ENST00000511769 KDM6BO15054 1643 aa17.67■□□□□ 0.42
PTPN20-225ENST00000511769 LMTK3Q96Q04 1460 aa17.66■□□□□ 0.42
PTPN20-225ENST00000511769 FAM69CQ0P6D2 419 aa17.63■□□□□ 0.41
PTPN20-225ENST00000511769 PIAS4Q8N2W9 510 aaPredicted RBP17.63■□□□□ 0.41
PTPN20-225ENST00000511769 SOGA1O94964 1423 aa17.62■□□□□ 0.41
PTPN20-225ENST00000511769 GRIN2BQ13224 1484 aa17.6■□□□□ 0.41
PTPN20-225ENST00000511769 WDR97A6NE52 1622 aa17.6■□□□□ 0.41
PTPN20-225ENST00000511769 ADGRL1O94910 1474 aa17.59■□□□□ 0.41
PTPN20-225ENST00000511769 ABCC10Q5T3U5 1492 aa17.57■□□□□ 0.4
PTPN20-225ENST00000511769 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
PTPN20-225ENST00000511769 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
PTPN20-225ENST00000511769 CEP170Q5SW79 1584 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms