RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
PDLIM5-215ENST00000511586 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
PDLIM5-215ENST00000511586 ABCC9O60706 1549 aa14.94□□□□□ -0.02
PDLIM5-215ENST00000511586 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
PDLIM5-215ENST00000511586 NACADO15069 1562 aa14.38□□□□□ -0.11
PDLIM5-215ENST00000511586 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
PDLIM5-215ENST00000511586 ZCCHC6Q5VYS8 1495 aaKnown RBP14.33□□□□□ -0.12
PDLIM5-215ENST00000511586 MYO15BQ96JP2 1530 aa14.3□□□□□ -0.12
PDLIM5-215ENST00000511586 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
PDLIM5-215ENST00000511586 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
PDLIM5-215ENST00000511586 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
PDLIM5-215ENST00000511586 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
PDLIM5-215ENST00000511586 BICRAQ9NZM4 1560 aa13.92□□□□□ -0.18
PDLIM5-215ENST00000511586 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
PDLIM5-215ENST00000511586 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
PDLIM5-215ENST00000511586 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-215ENST00000511586 CC2D2AQ9P2K1 1620 aa13.49□□□□□ -0.25
PDLIM5-215ENST00000511586 CECR2Q9BXF3 1484 aa13.42□□□□□ -0.26
PDLIM5-215ENST00000511586 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-215ENST00000511586 SMARCA4P51532 1647 aa13.32□□□□□ -0.28
PDLIM5-215ENST00000511586 NCAPD3P42695 1498 aa13.28□□□□□ -0.28
PDLIM5-215ENST00000511586 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
PDLIM5-215ENST00000511586 MROH2BQ7Z745 1585 aa13.27□□□□□ -0.29
PDLIM5-215ENST00000511586 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
PDLIM5-215ENST00000511586 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
PDLIM5-215ENST00000511586 HMGXB3Q12766 1538 aa13.18□□□□□ -0.3
PDLIM5-215ENST00000511586 BAZ1BQ9UIG0 1483 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-215ENST00000511586 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-215ENST00000511586 WIZO95785 1651 aa13.11□□□□□ -0.31
PDLIM5-215ENST00000511586 TOP2AP11388 1531 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-215ENST00000511586 NESP48681 1621 aa12.92□□□□□ -0.34
PDLIM5-215ENST00000511586 CADPSQ9ULU8 1353 aa12.91□□□□□ -0.34
PDLIM5-215ENST00000511586 LAMC3Q9Y6N6 1575 aa12.9□□□□□ -0.35
PDLIM5-215ENST00000511586 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
PDLIM5-215ENST00000511586 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-215ENST00000511586 PDS5BQ9NTI5 1447 aa12.85□□□□□ -0.35
PDLIM5-215ENST00000511586 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
PDLIM5-215ENST00000511586 CFTRP13569 1480 aa12.82□□□□□ -0.36
PDLIM5-215ENST00000511586 FANCD2Q9BXW9 1451 aa12.74□□□□□ -0.37
PDLIM5-215ENST00000511586 CUX2O14529 1486 aa12.73□□□□□ -0.37
PDLIM5-215ENST00000511586 KIF21AQ7Z4S6 1674 aa12.73□□□□□ -0.37
PDLIM5-215ENST00000511586 CEP164Q9UPV0 1460 aa12.72□□□□□ -0.37
PDLIM5-215ENST00000511586 THOC2Q8NI27 1593 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-215ENST00000511586 MRC2Q9UBG0 1479 aa12.68□□□□□ -0.38
PDLIM5-215ENST00000511586 PRDM2Q13029 1718 aa12.64□□□□□ -0.39
PDLIM5-215ENST00000511586 WDR62O43379 1518 aa12.62□□□□□ -0.39
PDLIM5-215ENST00000511586 URB2Q14146 1524 aaKnown RBP12.59□□□□□ -0.39
PDLIM5-215ENST00000511586 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
PDLIM5-215ENST00000511586 TOPBP1Q92547 1522 aa12.53□□□□□ -0.4
PDLIM5-215ENST00000511586 DNMBPQ6XZF7 1577 aa12.51□□□□□ -0.41
PDLIM5-215ENST00000511586 IFT140Q96RY7 1462 aa12.46□□□□□ -0.42
PDLIM5-215ENST00000511586 CUX1P39880 1505 aa12.44□□□□□ -0.42
PDLIM5-215ENST00000511586 POLA1P09884 1462 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-215ENST00000511586 SOGA1O94964 1423 aa12.41□□□□□ -0.42
PDLIM5-215ENST00000511586 WRNQ14191 1432 aaPredicted RBP eCLIP12.4□□□□□ -0.42
PDLIM5-215ENST00000511586 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.43
PDLIM5-215ENST00000511586 ZNF608Q9ULD9 1512 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-215ENST00000511586 RAD54L2Q9Y4B4 1467 aa12.38□□□□□ -0.43
PDLIM5-215ENST00000511586 TARBP1Q13395 1621 aaKnown RBP12.37□□□□□ -0.43
PDLIM5-215ENST00000511586 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
PDLIM5-215ENST00000511586 TOP2BQ02880 1626 aa12.33□□□□□ -0.43
PDLIM5-215ENST00000511586 TDRD9Q8NDG6 1382 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-215ENST00000511586 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.44
PDLIM5-215ENST00000511586 SYNJ1O43426 1573 aa12.32□□□□□ -0.44
PDLIM5-215ENST00000511586 BIVM-ERCC5R4GMW8 1640 aa12.32□□□□□ -0.44
PDLIM5-215ENST00000511586 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-215ENST00000511586 ABCA10Q8WWZ4 1543 aa12.28□□□□□ -0.44
PDLIM5-215ENST00000511586 WDR97A6NE52 1622 aa12.28□□□□□ -0.44
PDLIM5-215ENST00000511586 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
PDLIM5-215ENST00000511586 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
PDLIM5-215ENST00000511586 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
PDLIM5-215ENST00000511586 FBLN2P98095 1184 aa12.22□□□□□ -0.45
PDLIM5-215ENST00000511586 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.46
PDLIM5-215ENST00000511586 ABCA5Q8WWZ7 1642 aa12.2□□□□□ -0.46
PDLIM5-215ENST00000511586 MAGI1Q96QZ7 1491 aaPredicted RBP12.2□□□□□ -0.46
PDLIM5-215ENST00000511586 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
PDLIM5-215ENST00000511586 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
PDLIM5-215ENST00000511586 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
PDLIM5-215ENST00000511586 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
PDLIM5-215ENST00000511586 KIF27Q86VH2 1401 aa12.14□□□□□ -0.47
PDLIM5-215ENST00000511586 ERICH3Q5RHP9 1530 aa12.14□□□□□ -0.47
PDLIM5-215ENST00000511586 CHD1O14646 1710 aa12.12□□□□□ -0.47
PDLIM5-215ENST00000511586 FHAD1B1AJZ9 1412 aa12.11□□□□□ -0.47
PDLIM5-215ENST00000511586 IGF1RP08069 1367 aa12.1□□□□□ -0.47
PDLIM5-215ENST00000511586 ADAMTS12P58397 1594 aa12.08□□□□□ -0.48
PDLIM5-215ENST00000511586 GRIN2AQ12879 1464 aa12.07□□□□□ -0.48
PDLIM5-215ENST00000511586 CARMIL1Q5VZK9 1371 aa12.03□□□□□ -0.48
PDLIM5-215ENST00000511586 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
PDLIM5-215ENST00000511586 RUSC2Q8N2Y8 1516 aa12.02□□□□□ -0.48
PDLIM5-215ENST00000511586 CHIC1Q5VXU3 224 aa12.02□□□□□ -0.49
PDLIM5-215ENST00000511586 NUP160Q12769 1436 aa12.02□□□□□ -0.49
PDLIM5-215ENST00000511586 CUL7Q14999 1698 aa12.01□□□□□ -0.49
PDLIM5-215ENST00000511586 ARHGEF11O15085 1522 aa12□□□□□ -0.49
PDLIM5-215ENST00000511586 CEP170Q5SW79 1584 aa11.99□□□□□ -0.49
PDLIM5-215ENST00000511586 RIMBP3CA6NJZ7 1639 aa11.98□□□□□ -0.49
PDLIM5-215ENST00000511586 RIMBP3BA6NNM3 1639 aa11.98□□□□□ -0.49
PDLIM5-215ENST00000511586 RIMBP3Q9UFD9 1639 aa11.98□□□□□ -0.49
PDLIM5-215ENST00000511586 JPH4Q96JJ6 628 aa11.95□□□□□ -0.5
PDLIM5-215ENST00000511586 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
PDLIM5-215ENST00000511586 CYB5RLQ6IPT4 315 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms