RNA–Protein interactions for RNA: ENST00000511494.5

H2AFY-216, Transcript of H2A histone family member Y, humanhuman

TSL 2

Gene H2AFY, Length 2,521 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-216ENST00000511494 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
H2AFY-216ENST00000511494 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
H2AFY-216ENST00000511494 ABCC9O60706 1549 aa17.3■□□□□ 0.36
H2AFY-216ENST00000511494 DCAF8L2P0C7V8 631 aa16.72■□□□□ 0.27
H2AFY-216ENST00000511494 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
H2AFY-216ENST00000511494 NACADO15069 1562 aa16.63■□□□□ 0.25
H2AFY-216ENST00000511494 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
H2AFY-216ENST00000511494 MYO15BQ96JP2 1530 aa16.56■□□□□ 0.24
H2AFY-216ENST00000511494 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
H2AFY-216ENST00000511494 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
H2AFY-216ENST00000511494 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
H2AFY-216ENST00000511494 SCRIBQ14160 1630 aa16.17■□□□□ 0.18
H2AFY-216ENST00000511494 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
H2AFY-216ENST00000511494 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
H2AFY-216ENST00000511494 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
H2AFY-216ENST00000511494 EIF4G1Q04637 1599 aaKnown RBP15.7■□□□□ 0.1
H2AFY-216ENST00000511494 CC2D2AQ9P2K1 1620 aa15.63■□□□□ 0.09
H2AFY-216ENST00000511494 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
H2AFY-216ENST00000511494 SMARCA4P51532 1647 aa15.46■□□□□ 0.07
H2AFY-216ENST00000511494 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
H2AFY-216ENST00000511494 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
H2AFY-216ENST00000511494 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
H2AFY-216ENST00000511494 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
H2AFY-216ENST00000511494 SMARCA2P51531 1590 aa15.35■□□□□ 0.05
H2AFY-216ENST00000511494 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
H2AFY-216ENST00000511494 HMGXB3Q12766 1538 aa15.27■□□□□ 0.04
H2AFY-216ENST00000511494 RSF1Q96T23 1441 aaPredicted RBP15.27■□□□□ 0.03
H2AFY-216ENST00000511494 BAZ1BQ9UIG0 1483 aaKnown RBP15.26■□□□□ 0.03
H2AFY-216ENST00000511494 WIZO95785 1651 aa15.22■□□□□ 0.03
H2AFY-216ENST00000511494 TOP2AP11388 1531 aaKnown RBP15.06■□□□□ 0
H2AFY-216ENST00000511494 NESP48681 1621 aa15□□□□□ -0.01
H2AFY-216ENST00000511494 SUPT5HO00267 1087 aaKnown RBP14.95□□□□□ -0.02
H2AFY-216ENST00000511494 CADPSQ9ULU8 1353 aa14.95□□□□□ -0.02
H2AFY-216ENST00000511494 LAMC3Q9Y6N6 1575 aa14.92□□□□□ -0.02
H2AFY-216ENST00000511494 CCDC88BA6NC98 1476 aa14.92□□□□□ -0.02
H2AFY-216ENST00000511494 ERCC6Q03468 1493 aa14.9□□□□□ -0.02
H2AFY-216ENST00000511494 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
H2AFY-216ENST00000511494 CFTRP13569 1480 aa14.85□□□□□ -0.03
H2AFY-216ENST00000511494 KIF21AQ7Z4S6 1674 aa14.76□□□□□ -0.05
H2AFY-216ENST00000511494 FANCD2Q9BXW9 1451 aa14.76□□□□□ -0.05
H2AFY-216ENST00000511494 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
H2AFY-216ENST00000511494 THOC2Q8NI27 1593 aaKnown RBP14.71□□□□□ -0.05
H2AFY-216ENST00000511494 CUX2O14529 1486 aa14.71□□□□□ -0.05
H2AFY-216ENST00000511494 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
H2AFY-216ENST00000511494 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
H2AFY-216ENST00000511494 WDR62O43379 1518 aa14.63□□□□□ -0.07
H2AFY-216ENST00000511494 URB2Q14146 1524 aaKnown RBP14.61□□□□□ -0.07
H2AFY-216ENST00000511494 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
H2AFY-216ENST00000511494 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
H2AFY-216ENST00000511494 DNMBPQ6XZF7 1577 aa14.5□□□□□ -0.09
H2AFY-216ENST00000511494 CUX1P39880 1505 aa14.44□□□□□ -0.1
H2AFY-216ENST00000511494 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
H2AFY-216ENST00000511494 POLA1P09884 1462 aaPredicted RBP14.4□□□□□ -0.1
H2AFY-216ENST00000511494 FGD5Q6ZNL6 1462 aa14.38□□□□□ -0.11
H2AFY-216ENST00000511494 SOGA1O94964 1423 aa14.37□□□□□ -0.11
H2AFY-216ENST00000511494 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
H2AFY-216ENST00000511494 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
H2AFY-216ENST00000511494 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
H2AFY-216ENST00000511494 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
H2AFY-216ENST00000511494 SYNJ1O43426 1573 aa14.32□□□□□ -0.12
H2AFY-216ENST00000511494 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
H2AFY-216ENST00000511494 AQRO60306 1485 aaKnown RBP eCLIP14.3□□□□□ -0.122e-9■■■■□ 26.7
H2AFY-216ENST00000511494 BIVM-ERCC5R4GMW8 1640 aa14.29□□□□□ -0.12
H2AFY-216ENST00000511494 TDRD9Q8NDG6 1382 aaKnown RBP14.29□□□□□ -0.12
H2AFY-216ENST00000511494 EIF4G3O43432 1585 aaKnown RBP14.27□□□□□ -0.13
H2AFY-216ENST00000511494 ABCA10Q8WWZ4 1543 aa14.24□□□□□ -0.13
H2AFY-216ENST00000511494 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
H2AFY-216ENST00000511494 WDR97A6NE52 1622 aa14.21□□□□□ -0.13
H2AFY-216ENST00000511494 GAPVD1Q14C86 1478 aa14.19□□□□□ -0.14
H2AFY-216ENST00000511494 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
H2AFY-216ENST00000511494 ABCA5Q8WWZ7 1642 aa14.16□□□□□ -0.14
H2AFY-216ENST00000511494 OSCARQ8IYS5 282 aa14.15□□□□□ -0.14
H2AFY-216ENST00000511494 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
H2AFY-216ENST00000511494 FBLN2P98095 1184 aa14.13□□□□□ -0.15
H2AFY-216ENST00000511494 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
H2AFY-216ENST00000511494 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
H2AFY-216ENST00000511494 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
H2AFY-216ENST00000511494 CHMP7Q8WUX9 453 aaPredicted RBP14.09□□□□□ -0.15
H2AFY-216ENST00000511494 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
H2AFY-216ENST00000511494 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
H2AFY-216ENST00000511494 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
H2AFY-216ENST00000511494 CHD1O14646 1710 aa14.06□□□□□ -0.16
H2AFY-216ENST00000511494 IGF1RP08069 1367 aa14.04□□□□□ -0.16
H2AFY-216ENST00000511494 FHAD1B1AJZ9 1412 aa14.03□□□□□ -0.16
H2AFY-216ENST00000511494 ADAMTS12P58397 1594 aa14.02□□□□□ -0.16
H2AFY-216ENST00000511494 CHIC1Q5VXU3 224 aa13.99□□□□□ -0.17
H2AFY-216ENST00000511494 RUSC2Q8N2Y8 1516 aa13.99□□□□□ -0.17
H2AFY-216ENST00000511494 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
H2AFY-216ENST00000511494 CARMIL1Q5VZK9 1371 aa13.94□□□□□ -0.18
H2AFY-216ENST00000511494 CLASP1Q7Z460 1538 aa13.94□□□□□ -0.18
H2AFY-216ENST00000511494 NUP160Q12769 1436 aa13.93□□□□□ -0.18
H2AFY-216ENST00000511494 CUL7Q14999 1698 aa13.92□□□□□ -0.18
H2AFY-216ENST00000511494 CEP170Q5SW79 1584 aa13.91□□□□□ -0.18
H2AFY-216ENST00000511494 ARHGEF11O15085 1522 aa13.88□□□□□ -0.19
H2AFY-216ENST00000511494 RIMBP3CA6NJZ7 1639 aa13.87□□□□□ -0.19
H2AFY-216ENST00000511494 RIMBP3BA6NNM3 1639 aa13.87□□□□□ -0.19
H2AFY-216ENST00000511494 RIMBP3Q9UFD9 1639 aa13.87□□□□□ -0.19
H2AFY-216ENST00000511494 CSRNP3Q8WYN3 585 aa13.85□□□□□ -0.19
H2AFY-216ENST00000511494 RAPGEF2Q9Y4G8 1499 aa13.85□□□□□ -0.19
H2AFY-216ENST00000511494 FAM9AQ8IZU1 332 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms