RNA–Protein interactions for RNA: ENST00000511408.1

NDNF-203, Transcript of neuron derived neurotrophic factor, humanhuman

TSL 4

Gene NDNF, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDNF-203ENST00000511408 NISCHQ9Y2I1 1504 aa34.74■■■■□ 3.15
NDNF-203ENST00000511408 CCDC180Q9P1Z9 1646 aa30.81■■■□□ 2.52
NDNF-203ENST00000511408 ABCC9O60706 1549 aa29.58■■■□□ 2.33
NDNF-203ENST00000511408 ZCCHC6Q5VYS8 1495 aaKnown RBP29.04■■■□□ 2.24
NDNF-203ENST00000511408 MYO15BQ96JP2 1530 aa28.89■■■□□ 2.22
NDNF-203ENST00000511408 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.21
NDNF-203ENST00000511408 NACADO15069 1562 aa28.88■■■□□ 2.21
NDNF-203ENST00000511408 RB1CC1Q8TDY2 1594 aa28.8■■■□□ 2.2
NDNF-203ENST00000511408 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
NDNF-203ENST00000511408 SCRIBQ14160 1630 aa28■■■□□ 2.07
NDNF-203ENST00000511408 UNC13AQ9UPW8 1703 aa27.97■■■□□ 2.07
NDNF-203ENST00000511408 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
NDNF-203ENST00000511408 BICRAQ9NZM4 1560 aa27.74■■■□□ 2.03
NDNF-203ENST00000511408 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
NDNF-203ENST00000511408 EIF4G1Q04637 1599 aaKnown RBP27.06■■□□□ 1.92
NDNF-203ENST00000511408 BAZ1AQ9NRL2 1556 aaPredicted RBP26.97■■□□□ 1.91
NDNF-203ENST00000511408 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
NDNF-203ENST00000511408 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
NDNF-203ENST00000511408 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
NDNF-203ENST00000511408 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
NDNF-203ENST00000511408 MROH2BQ7Z745 1585 aa26.69■■□□□ 1.86
NDNF-203ENST00000511408 PEG3Q9GZU2 1588 aa26.67■■□□□ 1.86
NDNF-203ENST00000511408 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
NDNF-203ENST00000511408 DNAJC5BQ9UF47 199 aa26.6■■□□□ 1.85
NDNF-203ENST00000511408 NCAPD3P42695 1498 aa26.58■■□□□ 1.85
NDNF-203ENST00000511408 RSF1Q96T23 1441 aaPredicted RBP26.56■■□□□ 1.84
NDNF-203ENST00000511408 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
NDNF-203ENST00000511408 BAZ1BQ9UIG0 1483 aaKnown RBP26.48■■□□□ 1.83
NDNF-203ENST00000511408 WIZO95785 1651 aa26.41■■□□□ 1.82
NDNF-203ENST00000511408 TOP2AP11388 1531 aaKnown RBP26.29■■□□□ 1.8
NDNF-203ENST00000511408 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
NDNF-203ENST00000511408 CCDC88BA6NC98 1476 aa25.88■■□□□ 1.73
NDNF-203ENST00000511408 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
NDNF-203ENST00000511408 CADPSQ9ULU8 1353 aa25.82■■□□□ 1.72
NDNF-203ENST00000511408 CFTRP13569 1480 aa25.75■■□□□ 1.71
NDNF-203ENST00000511408 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
NDNF-203ENST00000511408 NESP48681 1621 aa25.66■■□□□ 1.7
NDNF-203ENST00000511408 PRDM2Q13029 1718 aa25.63■■□□□ 1.69
NDNF-203ENST00000511408 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
NDNF-203ENST00000511408 FANCD2Q9BXW9 1451 aa25.52■■□□□ 1.68
NDNF-203ENST00000511408 CEP164Q9UPV0 1460 aa25.5■■□□□ 1.67
NDNF-203ENST00000511408 KIF21AQ7Z4S6 1674 aa25.43■■□□□ 1.66
NDNF-203ENST00000511408 MRC2Q9UBG0 1479 aa25.36■■□□□ 1.65
NDNF-203ENST00000511408 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
NDNF-203ENST00000511408 THOC2Q8NI27 1593 aaKnown RBP25.3■■□□□ 1.64
NDNF-203ENST00000511408 WDR62O43379 1518 aa25.26■■□□□ 1.63
NDNF-203ENST00000511408 CUX2O14529 1486 aa25.24■■□□□ 1.63
NDNF-203ENST00000511408 DNMBPQ6XZF7 1577 aa25.19■■□□□ 1.62
NDNF-203ENST00000511408 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
NDNF-203ENST00000511408 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
NDNF-203ENST00000511408 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
NDNF-203ENST00000511408 CUX1P39880 1505 aa25.05■■□□□ 1.6
NDNF-203ENST00000511408 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
NDNF-203ENST00000511408 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
NDNF-203ENST00000511408 IFT140Q96RY7 1462 aa24.96■■□□□ 1.59
NDNF-203ENST00000511408 POLA1P09884 1462 aaPredicted RBP24.94■■□□□ 1.58
NDNF-203ENST00000511408 FGD5Q6ZNL6 1462 aa24.93■■□□□ 1.58
NDNF-203ENST00000511408 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
NDNF-203ENST00000511408 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
NDNF-203ENST00000511408 SOGA1O94964 1423 aa24.86■■□□□ 1.57
NDNF-203ENST00000511408 TARBP1Q13395 1621 aaKnown RBP24.8■■□□□ 1.56
NDNF-203ENST00000511408 ABCA10Q8WWZ4 1543 aa24.77■■□□□ 1.56
NDNF-203ENST00000511408 TRIM41Q8WV44 630 aa24.75■■□□□ 1.55
NDNF-203ENST00000511408 RAD54L2Q9Y4B4 1467 aa24.74■■□□□ 1.55
NDNF-203ENST00000511408 EIF4G3O43432 1585 aaKnown RBP24.66■■□□□ 1.54
NDNF-203ENST00000511408 ZNF608Q9ULD9 1512 aaPredicted RBP24.63■■□□□ 1.53
NDNF-203ENST00000511408 KIF27Q86VH2 1401 aa24.61■■□□□ 1.53
NDNF-203ENST00000511408 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
NDNF-203ENST00000511408 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
NDNF-203ENST00000511408 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
NDNF-203ENST00000511408 TDRD9Q8NDG6 1382 aaKnown RBP24.59■■□□□ 1.53
NDNF-203ENST00000511408 GRIN2BQ13224 1484 aa24.58■■□□□ 1.53
NDNF-203ENST00000511408 AQRO60306 1485 aaKnown RBP eCLIP24.56■■□□□ 1.52
NDNF-203ENST00000511408 ERICH3Q5RHP9 1530 aa24.52■■□□□ 1.52
NDNF-203ENST00000511408 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
NDNF-203ENST00000511408 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
NDNF-203ENST00000511408 EEA1Q15075 1411 aa24.49■■□□□ 1.51
NDNF-203ENST00000511408 SNAPC4Q5SXM2 1469 aa24.43■■□□□ 1.5
NDNF-203ENST00000511408 CUL7Q14999 1698 aa24.4■■□□□ 1.5
NDNF-203ENST00000511408 FHAD1B1AJZ9 1412 aa24.37■■□□□ 1.49
NDNF-203ENST00000511408 SYNJ2O15056 1496 aa24.37■■□□□ 1.49
NDNF-203ENST00000511408 ADAMTS12P58397 1594 aa24.36■■□□□ 1.49
NDNF-203ENST00000511408 IGF1RP08069 1367 aa24.33■■□□□ 1.49
NDNF-203ENST00000511408 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
NDNF-203ENST00000511408 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
NDNF-203ENST00000511408 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
NDNF-203ENST00000511408 GRIN2AQ12879 1464 aa24.23■■□□□ 1.47
NDNF-203ENST00000511408 CHD1O14646 1710 aa24.23■■□□□ 1.47
NDNF-203ENST00000511408 FBLN2P98095 1184 aa24.22■■□□□ 1.47
NDNF-203ENST00000511408 CSRNP3Q8WYN3 585 aa24.22■■□□□ 1.47
NDNF-203ENST00000511408 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
NDNF-203ENST00000511408 OSCARQ8IYS5 282 aa24.18■■□□□ 1.46
NDNF-203ENST00000511408 PRXQ9BXM0 1461 aa24.16■■□□□ 1.46
NDNF-203ENST00000511408 NUP160Q12769 1436 aa24.11■■□□□ 1.45
NDNF-203ENST00000511408 KIF21BO75037 1637 aa24.1■■□□□ 1.45
NDNF-203ENST00000511408 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
NDNF-203ENST00000511408 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
NDNF-203ENST00000511408 CLASP1Q7Z460 1538 aa24.02■■□□□ 1.44
NDNF-203ENST00000511408 KIAA0586Q9BVV6 1533 aa24■■□□□ 1.43
NDNF-203ENST00000511408 GOLGA3Q08378 1498 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms