RNA–Protein interactions for RNA: ENST00000511354.5

BDH2-208, Transcript of 3-hydroxybutyrate dehydrogenase 2, humanhuman

TSL 3

Gene BDH2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDH2-208ENST00000511354 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.88
BDH2-208ENST00000511354 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
BDH2-208ENST00000511354 ABCC9O60706 1549 aa17.49■□□□□ 0.39
BDH2-208ENST00000511354 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.35
BDH2-208ENST00000511354 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
BDH2-208ENST00000511354 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
BDH2-208ENST00000511354 NACADO15069 1562 aa17.11■□□□□ 0.33
BDH2-208ENST00000511354 RB1CC1Q8TDY2 1594 aa17.07■□□□□ 0.32
BDH2-208ENST00000511354 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
BDH2-208ENST00000511354 UNC13AQ9UPW8 1703 aa16.66■□□□□ 0.26
BDH2-208ENST00000511354 SCRIBQ14160 1630 aa16.59■□□□□ 0.25
BDH2-208ENST00000511354 SHROOM4Q9ULL8 1493 aa16.47■□□□□ 0.23
BDH2-208ENST00000511354 BICRAQ9NZM4 1560 aa16.45■□□□□ 0.22
BDH2-208ENST00000511354 PABPN1Q86U42 306 aaKnown RBP eCLIP16.31■□□□□ 0.2
BDH2-208ENST00000511354 EIF4G1Q04637 1599 aaKnown RBP16.03■□□□□ 0.16
BDH2-208ENST00000511354 BAZ1AQ9NRL2 1556 aaPredicted RBP15.99■□□□□ 0.15
BDH2-208ENST00000511354 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
BDH2-208ENST00000511354 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
BDH2-208ENST00000511354 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
BDH2-208ENST00000511354 SMARCA2P51531 1590 aa15.83■□□□□ 0.12
BDH2-208ENST00000511354 MROH2BQ7Z745 1585 aa15.81■□□□□ 0.12
BDH2-208ENST00000511354 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
BDH2-208ENST00000511354 ATAD2BQ9ULI0 1458 aa15.75■□□□□ 0.11
BDH2-208ENST00000511354 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
BDH2-208ENST00000511354 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
BDH2-208ENST00000511354 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
BDH2-208ENST00000511354 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
BDH2-208ENST00000511354 WIZO95785 1651 aa15.68■□□□□ 0.1
BDH2-208ENST00000511354 BAZ1BQ9UIG0 1483 aaKnown RBP15.66■□□□□ 0.1
BDH2-208ENST00000511354 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
BDH2-208ENST00000511354 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
BDH2-208ENST00000511354 SUPT5HO00267 1087 aaKnown RBP15.43■□□□□ 0.06
BDH2-208ENST00000511354 LAMC3Q9Y6N6 1575 aa15.33■□□□□ 0.05
BDH2-208ENST00000511354 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
BDH2-208ENST00000511354 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
BDH2-208ENST00000511354 CADPSQ9ULU8 1353 aa15.26■□□□□ 0.03
BDH2-208ENST00000511354 CFTRP13569 1480 aa15.23■□□□□ 0.03
BDH2-208ENST00000511354 PDS5BQ9NTI5 1447 aa15.19■□□□□ 0.02
BDH2-208ENST00000511354 NESP48681 1621 aa15.18■□□□□ 0.02
BDH2-208ENST00000511354 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
BDH2-208ENST00000511354 KIF21AQ7Z4S6 1674 aa15.12■□□□□ 0.01
BDH2-208ENST00000511354 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
BDH2-208ENST00000511354 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
BDH2-208ENST00000511354 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
BDH2-208ENST00000511354 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
BDH2-208ENST00000511354 ABCC8Q09428 1581 aa14.99□□□□□ -0.01
BDH2-208ENST00000511354 CHIC1Q5VXU3 224 aa14.97□□□□□ -0.01
BDH2-208ENST00000511354 WDR62O43379 1518 aa14.96□□□□□ -0.02
BDH2-208ENST00000511354 CUX2O14529 1486 aa14.93□□□□□ -0.02
BDH2-208ENST00000511354 DNMBPQ6XZF7 1577 aa14.93□□□□□ -0.02
BDH2-208ENST00000511354 URB2Q14146 1524 aaKnown RBP14.9□□□□□ -0.02
BDH2-208ENST00000511354 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
BDH2-208ENST00000511354 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
BDH2-208ENST00000511354 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
BDH2-208ENST00000511354 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
BDH2-208ENST00000511354 CUX1P39880 1505 aa14.83□□□□□ -0.04
BDH2-208ENST00000511354 SYNJ1O43426 1573 aa14.78□□□□□ -0.04
BDH2-208ENST00000511354 IFT140Q96RY7 1462 aa14.77□□□□□ -0.04
BDH2-208ENST00000511354 POLA1P09884 1462 aaPredicted RBP14.76□□□□□ -0.05
BDH2-208ENST00000511354 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
BDH2-208ENST00000511354 WDR97A6NE52 1622 aa14.74□□□□□ -0.05
BDH2-208ENST00000511354 TARBP1Q13395 1621 aaKnown RBP14.71□□□□□ -0.05
BDH2-208ENST00000511354 SOGA1O94964 1423 aa14.7□□□□□ -0.06
BDH2-208ENST00000511354 ABCA10Q8WWZ4 1543 aa14.66□□□□□ -0.06
BDH2-208ENST00000511354 RAD54L2Q9Y4B4 1467 aa14.63□□□□□ -0.07
BDH2-208ENST00000511354 EIF4G3O43432 1585 aaKnown RBP14.63□□□□□ -0.07
BDH2-208ENST00000511354 TRIM41Q8WV44 630 aa14.62□□□□□ -0.07
BDH2-208ENST00000511354 ABCA5Q8WWZ7 1642 aa14.6□□□□□ -0.07
BDH2-208ENST00000511354 PBRM1Q86U86 1689 aa14.58□□□□□ -0.08
BDH2-208ENST00000511354 ZNF608Q9ULD9 1512 aaPredicted RBP14.57□□□□□ -0.08
BDH2-208ENST00000511354 GAPVD1Q14C86 1478 aa14.56□□□□□ -0.08
BDH2-208ENST00000511354 KIF27Q86VH2 1401 aa14.55□□□□□ -0.08
BDH2-208ENST00000511354 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
BDH2-208ENST00000511354 ERICH3Q5RHP9 1530 aa14.53□□□□□ -0.08
BDH2-208ENST00000511354 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.08
BDH2-208ENST00000511354 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.08
BDH2-208ENST00000511354 MAGI1Q96QZ7 1491 aaPredicted RBP14.5□□□□□ -0.09
BDH2-208ENST00000511354 EEA1Q15075 1411 aa14.5□□□□□ -0.09
BDH2-208ENST00000511354 CUL7Q14999 1698 aa14.49□□□□□ -0.09
BDH2-208ENST00000511354 SNAPC4Q5SXM2 1469 aa14.45□□□□□ -0.1
BDH2-208ENST00000511354 ADAMTS12P58397 1594 aa14.44□□□□□ -0.1
BDH2-208ENST00000511354 SYNJ2O15056 1496 aa14.42□□□□□ -0.1
BDH2-208ENST00000511354 FHAD1B1AJZ9 1412 aa14.41□□□□□ -0.1
BDH2-208ENST00000511354 CHD1O14646 1710 aa14.41□□□□□ -0.1
BDH2-208ENST00000511354 IGF1RP08069 1367 aa14.38□□□□□ -0.11
BDH2-208ENST00000511354 RUSC2Q8N2Y8 1516 aa14.36□□□□□ -0.11
BDH2-208ENST00000511354 GRIN2AQ12879 1464 aa14.34□□□□□ -0.11
BDH2-208ENST00000511354 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
BDH2-208ENST00000511354 CARMIL1Q5VZK9 1371 aa14.34□□□□□ -0.11
BDH2-208ENST00000511354 CSRNP3Q8WYN3 585 aa14.32□□□□□ -0.12
BDH2-208ENST00000511354 RAPGEF2Q9Y4G8 1499 aa14.31□□□□□ -0.12
BDH2-208ENST00000511354 PRXQ9BXM0 1461 aa14.31□□□□□ -0.12
BDH2-208ENST00000511354 KIF21BO75037 1637 aa14.3□□□□□ -0.12
BDH2-208ENST00000511354 FBLN2P98095 1184 aa14.29□□□□□ -0.12
BDH2-208ENST00000511354 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
BDH2-208ENST00000511354 NUP160Q12769 1436 aa14.26□□□□□ -0.13
BDH2-208ENST00000511354 CTTNBP2Q8WZ74 1663 aa14.25□□□□□ -0.13
BDH2-208ENST00000511354 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
BDH2-208ENST00000511354 CLASP1Q7Z460 1538 aa14.24□□□□□ -0.13
BDH2-208ENST00000511354 FAM9AQ8IZU1 332 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms