RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 NISCHQ9Y2I1 1504 aa27.38■■□□□ 1.97
SGCA-207ENST00000511303 CCDC180Q9P1Z9 1646 aa23.95■■□□□ 1.42
SGCA-207ENST00000511303 ZCCHC6Q5VYS8 1495 aaKnown RBP22.93■■□□□ 1.26
SGCA-207ENST00000511303 ABCC9O60706 1549 aa22.75■■□□□ 1.23
SGCA-207ENST00000511303 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
SGCA-207ENST00000511303 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
SGCA-207ENST00000511303 MYO15BQ96JP2 1530 aa22.61■■□□□ 1.21
SGCA-207ENST00000511303 NACADO15069 1562 aa22.43■■□□□ 1.18
SGCA-207ENST00000511303 RB1CC1Q8TDY2 1594 aa22.24■■□□□ 1.15
SGCA-207ENST00000511303 SHROOM4Q9ULL8 1493 aa21.99■■□□□ 1.11
SGCA-207ENST00000511303 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
SGCA-207ENST00000511303 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
SGCA-207ENST00000511303 BICRAQ9NZM4 1560 aa21.48■■□□□ 1.03
SGCA-207ENST00000511303 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
SGCA-207ENST00000511303 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
SGCA-207ENST00000511303 BAZ1AQ9NRL2 1556 aaPredicted RBP21.17■□□□□ 0.98
SGCA-207ENST00000511303 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
SGCA-207ENST00000511303 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
SGCA-207ENST00000511303 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
SGCA-207ENST00000511303 SMARCA4P51532 1647 aa21.02■□□□□ 0.96
SGCA-207ENST00000511303 EIF4G1Q04637 1599 aaKnown RBP20.88■□□□□ 0.93
SGCA-207ENST00000511303 PEG3Q9GZU2 1588 aa20.88■□□□□ 0.93
SGCA-207ENST00000511303 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
SGCA-207ENST00000511303 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
SGCA-207ENST00000511303 WIZO95785 1651 aa20.8■□□□□ 0.92
SGCA-207ENST00000511303 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
SGCA-207ENST00000511303 TOP2AP11388 1531 aaKnown RBP20.71■□□□□ 0.91
SGCA-207ENST00000511303 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
SGCA-207ENST00000511303 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
SGCA-207ENST00000511303 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
SGCA-207ENST00000511303 CC2D2AQ9P2K1 1620 aa20.58■□□□□ 0.89
SGCA-207ENST00000511303 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
SGCA-207ENST00000511303 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
SGCA-207ENST00000511303 CFTRP13569 1480 aa20.18■□□□□ 0.82
SGCA-207ENST00000511303 CADPSQ9ULU8 1353 aa20.18■□□□□ 0.82
SGCA-207ENST00000511303 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
SGCA-207ENST00000511303 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
SGCA-207ENST00000511303 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
SGCA-207ENST00000511303 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
SGCA-207ENST00000511303 PRDM2Q13029 1718 aa19.88■□□□□ 0.77
SGCA-207ENST00000511303 NESP48681 1621 aa19.87■□□□□ 0.77
SGCA-207ENST00000511303 FANCD2Q9BXW9 1451 aa19.87■□□□□ 0.77
SGCA-207ENST00000511303 ABCC8Q09428 1581 aa19.86■□□□□ 0.77
SGCA-207ENST00000511303 CEP164Q9UPV0 1460 aa19.78■□□□□ 0.76
SGCA-207ENST00000511303 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
SGCA-207ENST00000511303 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
SGCA-207ENST00000511303 CUX1P39880 1505 aa19.71■□□□□ 0.75
SGCA-207ENST00000511303 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
SGCA-207ENST00000511303 EEA1Q15075 1411 aa19.65■□□□□ 0.74
SGCA-207ENST00000511303 DNMBPQ6XZF7 1577 aa19.65■□□□□ 0.74
SGCA-207ENST00000511303 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
SGCA-207ENST00000511303 URB2Q14146 1524 aaKnown RBP19.6■□□□□ 0.73
SGCA-207ENST00000511303 MRC2Q9UBG0 1479 aa19.6■□□□□ 0.73
SGCA-207ENST00000511303 ERCC6Q03468 1493 aa19.59■□□□□ 0.73
SGCA-207ENST00000511303 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
SGCA-207ENST00000511303 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
SGCA-207ENST00000511303 SOGA1O94964 1423 aa19.53■□□□□ 0.72
SGCA-207ENST00000511303 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
SGCA-207ENST00000511303 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
SGCA-207ENST00000511303 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
SGCA-207ENST00000511303 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
SGCA-207ENST00000511303 WDR62O43379 1518 aa19.48■□□□□ 0.71
SGCA-207ENST00000511303 ABCA10Q8WWZ4 1543 aa19.45■□□□□ 0.7
SGCA-207ENST00000511303 RUSC2Q8N2Y8 1516 aa19.42■□□□□ 0.7
SGCA-207ENST00000511303 CUX2O14529 1486 aa19.4■□□□□ 0.7
SGCA-207ENST00000511303 RAD54L2Q9Y4B4 1467 aa19.39■□□□□ 0.69
SGCA-207ENST00000511303 THOC2Q8NI27 1593 aaKnown RBP19.38■□□□□ 0.69
SGCA-207ENST00000511303 IFT140Q96RY7 1462 aa19.37■□□□□ 0.69
SGCA-207ENST00000511303 LOC105371045A0A1W2PR82 267 aa19.36■□□□□ 0.69
SGCA-207ENST00000511303 IGF1RP08069 1367 aa19.34■□□□□ 0.69
SGCA-207ENST00000511303 TARBP1Q13395 1621 aaKnown RBP19.31■□□□□ 0.68
SGCA-207ENST00000511303 PRXQ9BXM0 1461 aa19.28■□□□□ 0.68
SGCA-207ENST00000511303 WDR97A6NE52 1622 aa19.27■□□□□ 0.68
SGCA-207ENST00000511303 TDRD9Q8NDG6 1382 aaKnown RBP19.27■□□□□ 0.68
SGCA-207ENST00000511303 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
SGCA-207ENST00000511303 GOLGA3Q08378 1498 aa19.25■□□□□ 0.67
SGCA-207ENST00000511303 KIF21BO75037 1637 aa19.25■□□□□ 0.67
SGCA-207ENST00000511303 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
SGCA-207ENST00000511303 ERICH3Q5RHP9 1530 aa19.22■□□□□ 0.67
SGCA-207ENST00000511303 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
SGCA-207ENST00000511303 ABCA5Q8WWZ7 1642 aa19.21■□□□□ 0.67
SGCA-207ENST00000511303 UBTFP17480 764 aaKnown RBP19.19■□□□□ 0.66
SGCA-207ENST00000511303 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
SGCA-207ENST00000511303 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.66
SGCA-207ENST00000511303 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
SGCA-207ENST00000511303 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
SGCA-207ENST00000511303 CUL7Q14999 1698 aa19.12■□□□□ 0.65
SGCA-207ENST00000511303 DNAJC5Q9H3Z4 198 aa19.12■□□□□ 0.65
SGCA-207ENST00000511303 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
SGCA-207ENST00000511303 FHAD1B1AJZ9 1412 aa19.09■□□□□ 0.65
SGCA-207ENST00000511303 MAGI1Q96QZ7 1491 aaPredicted RBP19.04■□□□□ 0.64
SGCA-207ENST00000511303 EIF4G3O43432 1585 aaKnown RBP19.03■□□□□ 0.64
SGCA-207ENST00000511303 PBRM1Q86U86 1689 aa19■□□□□ 0.63
SGCA-207ENST00000511303 CEP162Q5TB80 1403 aa19■□□□□ 0.63
SGCA-207ENST00000511303 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
SGCA-207ENST00000511303 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
SGCA-207ENST00000511303 CHMP7Q8WUX9 453 aaPredicted RBP18.95■□□□□ 0.62
SGCA-207ENST00000511303 SYNJ2O15056 1496 aa18.95■□□□□ 0.62
SGCA-207ENST00000511303 CLIP1P30622 1438 aa18.92■□□□□ 0.62
SGCA-207ENST00000511303 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms