RNA–Protein interactions for RNA: ENST00000511284.5

TRIM6-210, Transcript of tripartite motif containing 6, humanhuman

TSL 5

Gene TRIM6, Length 740 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-210ENST00000511284 NISCHQ9Y2I1 1504 aa19.99■□□□□ 0.79
TRIM6-210ENST00000511284 ABCC9O60706 1549 aa17.95■□□□□ 0.46
TRIM6-210ENST00000511284 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
TRIM6-210ENST00000511284 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
TRIM6-210ENST00000511284 RB1CC1Q8TDY2 1594 aa16.81■□□□□ 0.28
TRIM6-210ENST00000511284 NACADO15069 1562 aa16.8■□□□□ 0.28
TRIM6-210ENST00000511284 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
TRIM6-210ENST00000511284 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
TRIM6-210ENST00000511284 DCAF8L2P0C7V8 631 aa16.69■□□□□ 0.26
TRIM6-210ENST00000511284 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
TRIM6-210ENST00000511284 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
TRIM6-210ENST00000511284 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
TRIM6-210ENST00000511284 UNC13AQ9UPW8 1703 aa16.32■□□□□ 0.2
TRIM6-210ENST00000511284 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.2
TRIM6-210ENST00000511284 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
TRIM6-210ENST00000511284 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
TRIM6-210ENST00000511284 CC2D2AQ9P2K1 1620 aa16.16■□□□□ 0.18
TRIM6-210ENST00000511284 SCRIBQ14160 1630 aa16.12■□□□□ 0.17
TRIM6-210ENST00000511284 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
TRIM6-210ENST00000511284 CUX2O14529 1486 aa15.82■□□□□ 0.12
TRIM6-210ENST00000511284 TRIM41Q8WV44 630 aa15.72■□□□□ 0.11
TRIM6-210ENST00000511284 ERCC6Q03468 1493 aa15.58■□□□□ 0.08
TRIM6-210ENST00000511284 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
TRIM6-210ENST00000511284 BAZ1AQ9NRL2 1556 aaPredicted RBP15.5■□□□□ 0.07
TRIM6-210ENST00000511284 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
TRIM6-210ENST00000511284 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
TRIM6-210ENST00000511284 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
TRIM6-210ENST00000511284 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
TRIM6-210ENST00000511284 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
TRIM6-210ENST00000511284 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
TRIM6-210ENST00000511284 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
TRIM6-210ENST00000511284 RSF1Q96T23 1441 aaPredicted RBP15.2■□□□□ 0.02
TRIM6-210ENST00000511284 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
TRIM6-210ENST00000511284 NESP48681 1621 aa15.17■□□□□ 0.02
TRIM6-210ENST00000511284 WIZO95785 1651 aa15.13■□□□□ 0.01
TRIM6-210ENST00000511284 LAMC3Q9Y6N6 1575 aa15.09■□□□□ 0.01
TRIM6-210ENST00000511284 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
TRIM6-210ENST00000511284 TOP2AP11388 1531 aaKnown RBP15.03■□□□□ -0
TRIM6-210ENST00000511284 PDS5BQ9NTI5 1447 aa15.03■□□□□ -0
TRIM6-210ENST00000511284 AEBP2Q6ZN18 517 aaPredicted RBP15.03■□□□□ -0
TRIM6-210ENST00000511284 OSCARQ8IYS5 282 aa14.97□□□□□ -0.01
TRIM6-210ENST00000511284 KIF21AQ7Z4S6 1674 aa14.95□□□□□ -0.02
TRIM6-210ENST00000511284 CFTRP13569 1480 aa14.95□□□□□ -0.02
TRIM6-210ENST00000511284 CCDC88BA6NC98 1476 aa14.88□□□□□ -0.03
TRIM6-210ENST00000511284 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
TRIM6-210ENST00000511284 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
TRIM6-210ENST00000511284 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
TRIM6-210ENST00000511284 FANCD2Q9BXW9 1451 aa14.84□□□□□ -0.03
TRIM6-210ENST00000511284 MRC2Q9UBG0 1479 aa14.83□□□□□ -0.03
TRIM6-210ENST00000511284 CEP164Q9UPV0 1460 aa14.82□□□□□ -0.04
TRIM6-210ENST00000511284 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
TRIM6-210ENST00000511284 WDR62O43379 1518 aa14.78□□□□□ -0.04
TRIM6-210ENST00000511284 ARHGEF11O15085 1522 aa14.72□□□□□ -0.05
TRIM6-210ENST00000511284 CYB5RLQ6IPT4 315 aa14.69□□□□□ -0.06
TRIM6-210ENST00000511284 URB2Q14146 1524 aaKnown RBP14.68□□□□□ -0.06
TRIM6-210ENST00000511284 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
TRIM6-210ENST00000511284 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
TRIM6-210ENST00000511284 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
TRIM6-210ENST00000511284 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
TRIM6-210ENST00000511284 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
TRIM6-210ENST00000511284 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
TRIM6-210ENST00000511284 ILDR1Q86SU0 546 aaPredicted RBP14.51□□□□□ -0.09
TRIM6-210ENST00000511284 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
TRIM6-210ENST00000511284 POLA1P09884 1462 aaPredicted RBP14.45□□□□□ -0.1
TRIM6-210ENST00000511284 ZNF608Q9ULD9 1512 aaPredicted RBP14.43□□□□□ -0.1
TRIM6-210ENST00000511284 SOGA1O94964 1423 aa14.42□□□□□ -0.1
TRIM6-210ENST00000511284 CUX1P39880 1505 aa14.41□□□□□ -0.1
TRIM6-210ENST00000511284 TARBP1Q13395 1621 aaKnown RBP14.41□□□□□ -0.1
TRIM6-210ENST00000511284 FGD5Q6ZNL6 1462 aa14.38□□□□□ -0.11
TRIM6-210ENST00000511284 RAD54L2Q9Y4B4 1467 aa14.37□□□□□ -0.11
TRIM6-210ENST00000511284 WDR97A6NE52 1622 aa14.36□□□□□ -0.11
TRIM6-210ENST00000511284 AQRO60306 1485 aaKnown RBP eCLIP14.36□□□□□ -0.119e-8■■□□□ 11.9
TRIM6-210ENST00000511284 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
TRIM6-210ENST00000511284 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
TRIM6-210ENST00000511284 WRNQ14191 1432 aaPredicted RBP eCLIP14.32□□□□□ -0.12
TRIM6-210ENST00000511284 CHD1O14646 1710 aa14.31□□□□□ -0.12
TRIM6-210ENST00000511284 ABCA10Q8WWZ4 1543 aa14.29□□□□□ -0.12
TRIM6-210ENST00000511284 TOP2BQ02880 1626 aa14.27□□□□□ -0.12
TRIM6-210ENST00000511284 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
TRIM6-210ENST00000511284 BIVM-ERCC5R4GMW8 1640 aa14.25□□□□□ -0.13
TRIM6-210ENST00000511284 MAGI1Q96QZ7 1491 aaPredicted RBP14.25□□□□□ -0.13
TRIM6-210ENST00000511284 FBLN2P98095 1184 aa14.24□□□□□ -0.13
TRIM6-210ENST00000511284 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
TRIM6-210ENST00000511284 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
TRIM6-210ENST00000511284 SNAPC4Q5SXM2 1469 aa14.2□□□□□ -0.14
TRIM6-210ENST00000511284 CHMP7Q8WUX9 453 aaPredicted RBP14.2□□□□□ -0.14
TRIM6-210ENST00000511284 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
TRIM6-210ENST00000511284 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
TRIM6-210ENST00000511284 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
TRIM6-210ENST00000511284 CLASP1Q7Z460 1538 aa14.1□□□□□ -0.15
TRIM6-210ENST00000511284 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
TRIM6-210ENST00000511284 PBRM1Q86U86 1689 aa14.1□□□□□ -0.15
TRIM6-210ENST00000511284 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
TRIM6-210ENST00000511284 KIF27Q86VH2 1401 aa14.06□□□□□ -0.16
TRIM6-210ENST00000511284 KDM4FA0A1W2PPD8 638 aa14.05□□□□□ -0.16
TRIM6-210ENST00000511284 NUP160Q12769 1436 aa14.04□□□□□ -0.16
TRIM6-210ENST00000511284 ADAMTS12P58397 1594 aa14.04□□□□□ -0.16
TRIM6-210ENST00000511284 IGF1RP08069 1367 aa14.03□□□□□ -0.16
TRIM6-210ENST00000511284 KIF13AQ9H1H9 1805 aa13.96□□□□□ -0.17
TRIM6-210ENST00000511284 CEP170Q5SW79 1584 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms