RNA–Protein interactions for RNA: ENST00000510474.5

NEK11-208, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-208ENST00000510474 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
NEK11-208ENST00000510474 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.25
NEK11-208ENST00000510474 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
NEK11-208ENST00000510474 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
NEK11-208ENST00000510474 DCAF8L2P0C7V8 631 aa15.56■□□□□ 0.08
NEK11-208ENST00000510474 SHROOM4Q9ULL8 1493 aa15.54■□□□□ 0.08
NEK11-208ENST00000510474 MYO15BQ96JP2 1530 aa15.54■□□□□ 0.08
NEK11-208ENST00000510474 ABCC9O60706 1549 aa15.46■□□□□ 0.07
NEK11-208ENST00000510474 NACADO15069 1562 aa15.38■□□□□ 0.05
NEK11-208ENST00000510474 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
NEK11-208ENST00000510474 SCRIBQ14160 1630 aa15.21■□□□□ 0.03
NEK11-208ENST00000510474 SUPT5HO00267 1087 aaKnown RBP15.03■□□□□ -0
NEK11-208ENST00000510474 UNC13AQ9UPW8 1703 aa14.92□□□□□ -0.02
NEK11-208ENST00000510474 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
NEK11-208ENST00000510474 CECR2Q9BXF3 1484 aa14.74□□□□□ -0.05
NEK11-208ENST00000510474 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
NEK11-208ENST00000510474 BAZ1AQ9NRL2 1556 aaPredicted RBP14.7□□□□□ -0.06
NEK11-208ENST00000510474 MROH2BQ7Z745 1585 aa14.69□□□□□ -0.06
NEK11-208ENST00000510474 SMARCA4P51532 1647 aa14.61□□□□□ -0.07
NEK11-208ENST00000510474 PELP1Q8IZL8 1130 aaKnown RBP14.6□□□□□ -0.07
NEK11-208ENST00000510474 WIZO95785 1651 aa14.58□□□□□ -0.08
NEK11-208ENST00000510474 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
NEK11-208ENST00000510474 MYT1Q01538 1121 aa14.49□□□□□ -0.09
NEK11-208ENST00000510474 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
NEK11-208ENST00000510474 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
NEK11-208ENST00000510474 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
NEK11-208ENST00000510474 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
NEK11-208ENST00000510474 ATAD2BQ9ULI0 1458 aa14.31□□□□□ -0.12
NEK11-208ENST00000510474 EIF4G1Q04637 1599 aaKnown RBP14.29□□□□□ -0.12
NEK11-208ENST00000510474 CCDC88BA6NC98 1476 aa14.28□□□□□ -0.12
NEK11-208ENST00000510474 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
NEK11-208ENST00000510474 HMGXB3Q12766 1538 aa14.2□□□□□ -0.14
NEK11-208ENST00000510474 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
NEK11-208ENST00000510474 TRIM41Q8WV44 630 aa14.14□□□□□ -0.15
NEK11-208ENST00000510474 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.15
NEK11-208ENST00000510474 CC2D2AQ9P2K1 1620 aa14.03□□□□□ -0.16
NEK11-208ENST00000510474 ABCC8Q09428 1581 aa14.02□□□□□ -0.16
NEK11-208ENST00000510474 WRNQ14191 1432 aaPredicted RBP eCLIP13.94□□□□□ -0.18
NEK11-208ENST00000510474 CFTRP13569 1480 aa13.9□□□□□ -0.18
NEK11-208ENST00000510474 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
NEK11-208ENST00000510474 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
NEK11-208ENST00000510474 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
NEK11-208ENST00000510474 FAM9AQ8IZU1 332 aaPredicted RBP13.85□□□□□ -0.19
NEK11-208ENST00000510474 EEA1Q15075 1411 aa13.85□□□□□ -0.19
NEK11-208ENST00000510474 TOP2BQ02880 1626 aa13.83□□□□□ -0.19
NEK11-208ENST00000510474 BIVM-ERCC5R4GMW8 1640 aa13.82□□□□□ -0.2
NEK11-208ENST00000510474 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
NEK11-208ENST00000510474 SOGA1O94964 1423 aa13.77□□□□□ -0.2
NEK11-208ENST00000510474 CUX1P39880 1505 aa13.73□□□□□ -0.21
NEK11-208ENST00000510474 SLC24A1O60721 1099 aa13.73□□□□□ -0.21
NEK11-208ENST00000510474 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
NEK11-208ENST00000510474 RUSC2Q8N2Y8 1516 aa13.7□□□□□ -0.22
NEK11-208ENST00000510474 LAMC3Q9Y6N6 1575 aa13.7□□□□□ -0.22
NEK11-208ENST00000510474 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
NEK11-208ENST00000510474 FANCD2Q9BXW9 1451 aa13.67□□□□□ -0.22
NEK11-208ENST00000510474 KIF21BO75037 1637 aa13.66□□□□□ -0.22
NEK11-208ENST00000510474 GOLGA3Q08378 1498 aa13.64□□□□□ -0.23
NEK11-208ENST00000510474 CEP164Q9UPV0 1460 aa13.63□□□□□ -0.23
NEK11-208ENST00000510474 NESP48681 1621 aa13.61□□□□□ -0.23
NEK11-208ENST00000510474 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
NEK11-208ENST00000510474 EHMT2Q96KQ7 1210 aa13.61□□□□□ -0.23
NEK11-208ENST00000510474 DNMBPQ6XZF7 1577 aa13.59□□□□□ -0.23
NEK11-208ENST00000510474 KIF27Q86VH2 1401 aa13.58□□□□□ -0.24
NEK11-208ENST00000510474 FGD5Q6ZNL6 1462 aa13.56□□□□□ -0.24
NEK11-208ENST00000510474 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
NEK11-208ENST00000510474 CEP162Q5TB80 1403 aa13.55□□□□□ -0.24
NEK11-208ENST00000510474 ERICH3Q5RHP9 1530 aa13.55□□□□□ -0.24
NEK11-208ENST00000510474 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
NEK11-208ENST00000510474 PRXQ9BXM0 1461 aa13.52□□□□□ -0.24
NEK11-208ENST00000510474 DNAJC5BQ9UF47 199 aa13.52□□□□□ -0.24
NEK11-208ENST00000510474 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
NEK11-208ENST00000510474 UBTFP17480 764 aaKnown RBP13.51□□□□□ -0.25
NEK11-208ENST00000510474 APLP2Q06481 763 aa13.51□□□□□ -0.25
NEK11-208ENST00000510474 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
NEK11-208ENST00000510474 CUX2O14529 1486 aa13.49□□□□□ -0.25
NEK11-208ENST00000510474 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
NEK11-208ENST00000510474 URB2Q14146 1524 aaKnown RBP13.48□□□□□ -0.25
NEK11-208ENST00000510474 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
NEK11-208ENST00000510474 ERICH6Q7L0X2 663 aa13.46□□□□□ -0.26
NEK11-208ENST00000510474 TRIM26Q12899 539 aaPredicted RBP13.43□□□□□ -0.26
NEK11-208ENST00000510474 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
NEK11-208ENST00000510474 PCGF6Q9BYE7 350 aa13.42□□□□□ -0.26
NEK11-208ENST00000510474 CLIP1P30622 1438 aa13.41□□□□□ -0.26
NEK11-208ENST00000510474 IGF1RP08069 1367 aa13.4□□□□□ -0.26
NEK11-208ENST00000510474 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
NEK11-208ENST00000510474 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
NEK11-208ENST00000510474 CUL7Q14999 1698 aa13.37□□□□□ -0.27
NEK11-208ENST00000510474 ABCA5Q8WWZ7 1642 aa13.36□□□□□ -0.27
NEK11-208ENST00000510474 CARMIL1Q5VZK9 1371 aa13.35□□□□□ -0.27
NEK11-208ENST00000510474 TARBP1Q13395 1621 aaKnown RBP13.34□□□□□ -0.27
NEK11-208ENST00000510474 VPS8Q8N3P4 1428 aa13.33□□□□□ -0.28
NEK11-208ENST00000510474 WDR62O43379 1518 aa13.32□□□□□ -0.28
NEK11-208ENST00000510474 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
NEK11-208ENST00000510474 ERCC6Q03468 1493 aa13.26□□□□□ -0.29
NEK11-208ENST00000510474 ARAP1Q96P48 1450 aa13.26□□□□□ -0.29
NEK11-208ENST00000510474 THOC2Q8NI27 1593 aaKnown RBP13.25□□□□□ -0.29
NEK11-208ENST00000510474 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
NEK11-208ENST00000510474 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
NEK11-208ENST00000510474 CTTNBP2Q8WZ74 1663 aa13.24□□□□□ -0.29
NEK11-208ENST00000510474 PBRM1Q86U86 1689 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms