RNA–Protein interactions for RNA: ENST00000510041.1

PCDH12-202, Transcript of protocadherin 12, humanhuman

TSL 4

Gene PCDH12, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-202ENST00000510041 NISCHQ9Y2I1 1504 aa31.89■■■□□ 2.7
PCDH12-202ENST00000510041 ABCC9O60706 1549 aa29.64■■■□□ 2.34
PCDH12-202ENST00000510041 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
PCDH12-202ENST00000510041 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
PCDH12-202ENST00000510041 RB1CC1Q8TDY2 1594 aa27.8■■■□□ 2.04
PCDH12-202ENST00000510041 PABPN1Q86U42 306 aaKnown RBP eCLIP27.49■■□□□ 1.99
PCDH12-202ENST00000510041 NACADO15069 1562 aa27.42■■□□□ 1.98
PCDH12-202ENST00000510041 UNC13AQ9UPW8 1703 aa27.3■■□□□ 1.96
PCDH12-202ENST00000510041 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
PCDH12-202ENST00000510041 BICRAQ9NZM4 1560 aa27.12■■□□□ 1.93
PCDH12-202ENST00000510041 MYO15BQ96JP2 1530 aa26.76■■□□□ 1.87
PCDH12-202ENST00000510041 CECR2Q9BXF3 1484 aa26.71■■□□□ 1.87
PCDH12-202ENST00000510041 CC2D2AQ9P2K1 1620 aa26.71■■□□□ 1.87
PCDH12-202ENST00000510041 SHROOM4Q9ULL8 1493 aa26.49■■□□□ 1.83
PCDH12-202ENST00000510041 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
PCDH12-202ENST00000510041 DNAJC5Q9H3Z4 198 aa26.46■■□□□ 1.83
PCDH12-202ENST00000510041 SCRIBQ14160 1630 aa26.39■■□□□ 1.81
PCDH12-202ENST00000510041 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
PCDH12-202ENST00000510041 DCAF1Q9Y4B6 1507 aa26.22■■□□□ 1.79
PCDH12-202ENST00000510041 CUX2O14529 1486 aa25.7■■□□□ 1.7
PCDH12-202ENST00000510041 ERCC6Q03468 1493 aa25.57■■□□□ 1.68
PCDH12-202ENST00000510041 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
PCDH12-202ENST00000510041 NESP48681 1621 aa25.3■■□□□ 1.64
PCDH12-202ENST00000510041 ATAD2BQ9ULI0 1458 aa25.21■■□□□ 1.63
PCDH12-202ENST00000510041 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.61
PCDH12-202ENST00000510041 TRIM41Q8WV44 630 aa25.12■■□□□ 1.61
PCDH12-202ENST00000510041 HMGXB3Q12766 1538 aa25.1■■□□□ 1.61
PCDH12-202ENST00000510041 SMARCA2P51531 1590 aa25.05■■□□□ 1.6
PCDH12-202ENST00000510041 SMARCA4P51532 1647 aa25.04■■□□□ 1.6
PCDH12-202ENST00000510041 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
PCDH12-202ENST00000510041 BAZ1BQ9UIG0 1483 aaKnown RBP24.93■■□□□ 1.58
PCDH12-202ENST00000510041 LAMC3Q9Y6N6 1575 aa24.88■■□□□ 1.57
PCDH12-202ENST00000510041 BAZ1AQ9NRL2 1556 aaPredicted RBP24.76■■□□□ 1.55
PCDH12-202ENST00000510041 PEG3Q9GZU2 1588 aa24.75■■□□□ 1.55
PCDH12-202ENST00000510041 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
PCDH12-202ENST00000510041 MROH2BQ7Z745 1585 aa24.63■■□□□ 1.53
PCDH12-202ENST00000510041 MRC2Q9UBG0 1479 aa24.62■■□□□ 1.53
PCDH12-202ENST00000510041 WDR62O43379 1518 aa24.59■■□□□ 1.53
PCDH12-202ENST00000510041 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
PCDH12-202ENST00000510041 OSCARQ8IYS5 282 aa24.39■■□□□ 1.49
PCDH12-202ENST00000510041 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
PCDH12-202ENST00000510041 WIZO95785 1651 aa24.32■■□□□ 1.48
PCDH12-202ENST00000510041 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
PCDH12-202ENST00000510041 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
PCDH12-202ENST00000510041 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
PCDH12-202ENST00000510041 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
PCDH12-202ENST00000510041 URB2Q14146 1524 aaKnown RBP24.2■■□□□ 1.47
PCDH12-202ENST00000510041 CFTRP13569 1480 aa24.13■■□□□ 1.45
PCDH12-202ENST00000510041 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
PCDH12-202ENST00000510041 ZNF608Q9ULD9 1512 aaPredicted RBP24.04■■□□□ 1.44
PCDH12-202ENST00000510041 CYB5RLQ6IPT4 315 aa23.94■■□□□ 1.42
PCDH12-202ENST00000510041 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.42
PCDH12-202ENST00000510041 IFT140Q96RY7 1462 aa23.89■■□□□ 1.42
PCDH12-202ENST00000510041 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
PCDH12-202ENST00000510041 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
PCDH12-202ENST00000510041 ARAP1Q96P48 1450 aa23.85■■□□□ 1.41
PCDH12-202ENST00000510041 EIF4G3O43432 1585 aaKnown RBP23.84■■□□□ 1.41
PCDH12-202ENST00000510041 RSF1Q96T23 1441 aaPredicted RBP23.83■■□□□ 1.4
PCDH12-202ENST00000510041 CHD1O14646 1710 aa23.82■■□□□ 1.4
PCDH12-202ENST00000510041 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
PCDH12-202ENST00000510041 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.38
PCDH12-202ENST00000510041 FBLN2P98095 1184 aa23.65■■□□□ 1.38
PCDH12-202ENST00000510041 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
PCDH12-202ENST00000510041 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.38
PCDH12-202ENST00000510041 AEBP2Q6ZN18 517 aaPredicted RBP23.64■■□□□ 1.37
PCDH12-202ENST00000510041 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
PCDH12-202ENST00000510041 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
PCDH12-202ENST00000510041 POLA1P09884 1462 aaPredicted RBP23.51■■□□□ 1.35
PCDH12-202ENST00000510041 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
PCDH12-202ENST00000510041 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
PCDH12-202ENST00000510041 TDRD9Q8NDG6 1382 aaKnown RBP23.44■■□□□ 1.34
PCDH12-202ENST00000510041 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
PCDH12-202ENST00000510041 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
PCDH12-202ENST00000510041 SOGA1O94964 1423 aa23.34■■□□□ 1.33
PCDH12-202ENST00000510041 CHMP7Q8WUX9 453 aaPredicted RBP23.31■■□□□ 1.32
PCDH12-202ENST00000510041 FGD5Q6ZNL6 1462 aa23.28■■□□□ 1.32
PCDH12-202ENST00000510041 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
PCDH12-202ENST00000510041 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
PCDH12-202ENST00000510041 WDR97A6NE52 1622 aa23.23■■□□□ 1.31
PCDH12-202ENST00000510041 SYNJ2O15056 1496 aa23.22■■□□□ 1.31
PCDH12-202ENST00000510041 GRIN2BQ13224 1484 aa23.21■■□□□ 1.31
PCDH12-202ENST00000510041 CUX1P39880 1505 aa23.17■■□□□ 1.3
PCDH12-202ENST00000510041 ERCC6L2Q5T890 1561 aa23.16■■□□□ 1.3
PCDH12-202ENST00000510041 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
PCDH12-202ENST00000510041 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
PCDH12-202ENST00000510041 ABCA5Q8WWZ7 1642 aa23■■□□□ 1.27
PCDH12-202ENST00000510041 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
PCDH12-202ENST00000510041 GRIN2AQ12879 1464 aa22.94■■□□□ 1.26
PCDH12-202ENST00000510041 ABCA10Q8WWZ4 1543 aa22.92■■□□□ 1.26
PCDH12-202ENST00000510041 NUP160Q12769 1436 aa22.88■■□□□ 1.25
PCDH12-202ENST00000510041 ADAMTS12P58397 1594 aa22.88■■□□□ 1.25
PCDH12-202ENST00000510041 SHROOM2Q13796 1616 aa22.87■■□□□ 1.25
PCDH12-202ENST00000510041 ILDR1Q86SU0 546 aaPredicted RBP22.76■■□□□ 1.23
PCDH12-202ENST00000510041 KDM4FA0A1W2PPD8 638 aa22.75■■□□□ 1.23
PCDH12-202ENST00000510041 PRG4Q92954 1404 aaPredicted RBP22.74■■□□□ 1.23
PCDH12-202ENST00000510041 FAM69CQ0P6D2 419 aa22.73■■□□□ 1.23
PCDH12-202ENST00000510041 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
PCDH12-202ENST00000510041 ABCC10Q5T3U5 1492 aa22.72■■□□□ 1.23
PCDH12-202ENST00000510041 DIP2BQ9P265 1576 aa22.69■■□□□ 1.22
PCDH12-202ENST00000510041 WRNQ14191 1432 aaPredicted RBP eCLIP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms