RNA–Protein interactions for RNA: ENST00000510030.2

SCAMP1-203, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-203ENST00000510030 NISCHQ9Y2I1 1504 aa38.75■■■■□ 3.79
SCAMP1-203ENST00000510030 CCDC180Q9P1Z9 1646 aa34.19■■■■□ 3.06
SCAMP1-203ENST00000510030 ABCC9O60706 1549 aa33.53■■■□□ 2.96
SCAMP1-203ENST00000510030 ZCCHC6Q5VYS8 1495 aaKnown RBP32.49■■■□□ 2.79
SCAMP1-203ENST00000510030 DCAF1Q9Y4B6 1507 aa32.22■■■□□ 2.75
SCAMP1-203ENST00000510030 MYO15BQ96JP2 1530 aa32.05■■■□□ 2.72
SCAMP1-203ENST00000510030 NACADO15069 1562 aa31.89■■■□□ 2.7
SCAMP1-203ENST00000510030 DCAF8L2P0C7V8 631 aa31.87■■■□□ 2.69
SCAMP1-203ENST00000510030 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
SCAMP1-203ENST00000510030 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
SCAMP1-203ENST00000510030 PABPN1Q86U42 306 aaKnown RBP eCLIP31.26■■■□□ 2.59
SCAMP1-203ENST00000510030 UNC13AQ9UPW8 1703 aa31.15■■■□□ 2.58
SCAMP1-203ENST00000510030 SCRIBQ14160 1630 aa31.11■■■□□ 2.57
SCAMP1-203ENST00000510030 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
SCAMP1-203ENST00000510030 BICRAQ9NZM4 1560 aa30.95■■■□□ 2.54
SCAMP1-203ENST00000510030 CC2D2AQ9P2K1 1620 aa30.23■■■□□ 2.43
SCAMP1-203ENST00000510030 EIF4G1Q04637 1599 aaKnown RBP30.14■■■□□ 2.42
SCAMP1-203ENST00000510030 CECR2Q9BXF3 1484 aa30.12■■■□□ 2.41
SCAMP1-203ENST00000510030 BAZ1AQ9NRL2 1556 aaPredicted RBP30.06■■■□□ 2.4
SCAMP1-203ENST00000510030 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
SCAMP1-203ENST00000510030 RSF1Q96T23 1441 aaPredicted RBP29.81■■■□□ 2.36
SCAMP1-203ENST00000510030 MROH2BQ7Z745 1585 aa29.8■■■□□ 2.36
SCAMP1-203ENST00000510030 SUPT5HO00267 1087 aaKnown RBP29.68■■■□□ 2.34
SCAMP1-203ENST00000510030 PEG3Q9GZU2 1588 aa29.64■■■□□ 2.34
SCAMP1-203ENST00000510030 SMARCA2P51531 1590 aa29.59■■■□□ 2.33
SCAMP1-203ENST00000510030 WIZO95785 1651 aa29.54■■■□□ 2.32
SCAMP1-203ENST00000510030 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
SCAMP1-203ENST00000510030 TOP2AP11388 1531 aaKnown RBP29.39■■■□□ 2.3
SCAMP1-203ENST00000510030 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
SCAMP1-203ENST00000510030 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
SCAMP1-203ENST00000510030 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
SCAMP1-203ENST00000510030 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
SCAMP1-203ENST00000510030 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
SCAMP1-203ENST00000510030 NESP48681 1621 aa28.85■■■□□ 2.21
SCAMP1-203ENST00000510030 DNAJC5Q9H3Z4 198 aa28.72■■■□□ 2.19
SCAMP1-203ENST00000510030 CUX2O14529 1486 aa28.69■■■□□ 2.18
SCAMP1-203ENST00000510030 CFTRP13569 1480 aa28.55■■■□□ 2.16
SCAMP1-203ENST00000510030 PRDM2Q13029 1718 aa28.55■■■□□ 2.16
SCAMP1-203ENST00000510030 CADPSQ9ULU8 1353 aa28.51■■■□□ 2.16
SCAMP1-203ENST00000510030 LAMC3Q9Y6N6 1575 aa28.5■■■□□ 2.15
SCAMP1-203ENST00000510030 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
SCAMP1-203ENST00000510030 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
SCAMP1-203ENST00000510030 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
SCAMP1-203ENST00000510030 PDS5BQ9NTI5 1447 aa28.25■■■□□ 2.11
SCAMP1-203ENST00000510030 FANCD2Q9BXW9 1451 aa28.19■■■□□ 2.1
SCAMP1-203ENST00000510030 WRNQ14191 1432 aaPredicted RBP eCLIP28.16■■■□□ 2.1
SCAMP1-203ENST00000510030 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
SCAMP1-203ENST00000510030 CEP164Q9UPV0 1460 aa28.12■■■□□ 2.09
SCAMP1-203ENST00000510030 MRC2Q9UBG0 1479 aa28.09■■■□□ 2.09
SCAMP1-203ENST00000510030 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
SCAMP1-203ENST00000510030 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
SCAMP1-203ENST00000510030 BIVM-ERCC5R4GMW8 1640 aa28.03■■■□□ 2.08
SCAMP1-203ENST00000510030 WDR62O43379 1518 aa28.02■■■□□ 2.08
SCAMP1-203ENST00000510030 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
SCAMP1-203ENST00000510030 DNMBPQ6XZF7 1577 aa27.94■■■□□ 2.06
SCAMP1-203ENST00000510030 CUX1P39880 1505 aa27.92■■■□□ 2.06
SCAMP1-203ENST00000510030 TOPBP1Q92547 1522 aa27.83■■■□□ 2.05
SCAMP1-203ENST00000510030 URB2Q14146 1524 aaKnown RBP27.8■■■□□ 2.04
SCAMP1-203ENST00000510030 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
SCAMP1-203ENST00000510030 EEA1Q15075 1411 aa27.71■■■□□ 2.03
SCAMP1-203ENST00000510030 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
SCAMP1-203ENST00000510030 SOGA1O94964 1423 aa27.55■■■□□ 2
SCAMP1-203ENST00000510030 ABCA10Q8WWZ4 1543 aa27.55■■■□□ 2
SCAMP1-203ENST00000510030 KIF27Q86VH2 1401 aa27.54■■■□□ 2
SCAMP1-203ENST00000510030 ZNF608Q9ULD9 1512 aaPredicted RBP27.51■■□□□ 1.99
SCAMP1-203ENST00000510030 WDR97A6NE52 1622 aa27.5■■□□□ 1.99
SCAMP1-203ENST00000510030 IFT140Q96RY7 1462 aa27.5■■□□□ 1.99
SCAMP1-203ENST00000510030 TARBP1Q13395 1621 aaKnown RBP27.47■■□□□ 1.99
SCAMP1-203ENST00000510030 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
SCAMP1-203ENST00000510030 OSCARQ8IYS5 282 aa27.39■■□□□ 1.98
SCAMP1-203ENST00000510030 CSRNP3Q8WYN3 585 aa27.36■■□□□ 1.97
SCAMP1-203ENST00000510030 ABCA5Q8WWZ7 1642 aa27.35■■□□□ 1.97
SCAMP1-203ENST00000510030 FAM9AQ8IZU1 332 aaPredicted RBP27.35■■□□□ 1.97
SCAMP1-203ENST00000510030 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
SCAMP1-203ENST00000510030 EIF4G3O43432 1585 aaKnown RBP27.3■■□□□ 1.96
SCAMP1-203ENST00000510030 KIF21BO75037 1637 aa27.29■■□□□ 1.96
SCAMP1-203ENST00000510030 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
SCAMP1-203ENST00000510030 GAPVD1Q14C86 1478 aa27.28■■□□□ 1.96
SCAMP1-203ENST00000510030 CUL7Q14999 1698 aa27.26■■□□□ 1.95
SCAMP1-203ENST00000510030 AQRO60306 1485 aaKnown RBP eCLIP27.23■■□□□ 1.95
SCAMP1-203ENST00000510030 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
SCAMP1-203ENST00000510030 PBRM1Q86U86 1689 aa27.21■■□□□ 1.95
SCAMP1-203ENST00000510030 GOLGA3Q08378 1498 aa27.19■■□□□ 1.94
SCAMP1-203ENST00000510030 IGF1RP08069 1367 aa27.19■■□□□ 1.94
SCAMP1-203ENST00000510030 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
SCAMP1-203ENST00000510030 RIMBP3CA6NJZ7 1639 aa27.18■■□□□ 1.94
SCAMP1-203ENST00000510030 RIMBP3BA6NNM3 1639 aa27.18■■□□□ 1.94
SCAMP1-203ENST00000510030 RIMBP3Q9UFD9 1639 aa27.18■■□□□ 1.94
SCAMP1-203ENST00000510030 PRXQ9BXM0 1461 aa27.18■■□□□ 1.94
SCAMP1-203ENST00000510030 CHD1O14646 1710 aa27.1■■□□□ 1.93
SCAMP1-203ENST00000510030 CARMIL1Q5VZK9 1371 aa27.09■■□□□ 1.93
SCAMP1-203ENST00000510030 RAPGEF2Q9Y4G8 1499 aa27.09■■□□□ 1.93
SCAMP1-203ENST00000510030 ARHGEF11O15085 1522 aa27.07■■□□□ 1.92
SCAMP1-203ENST00000510030 MAGI1Q96QZ7 1491 aaPredicted RBP27.06■■□□□ 1.92
SCAMP1-203ENST00000510030 ADAMTS12P58397 1594 aa27.03■■□□□ 1.92
SCAMP1-203ENST00000510030 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
SCAMP1-203ENST00000510030 FBLN2P98095 1184 aa27.02■■□□□ 1.92
SCAMP1-203ENST00000510030 TNIKQ9UKE5 1360 aa26.98■■□□□ 1.91
SCAMP1-203ENST00000510030 LOC105371045A0A1W2PR82 267 aa26.98■■□□□ 1.91
SCAMP1-203ENST00000510030 SNAPC4Q5SXM2 1469 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms