RNA–Protein interactions for RNA: ENST00000509927.1

FAT1-209, Transcript of FAT atypical cadherin 1, humanhuman

TSL 1 (best)

Gene FAT1, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAT1-209ENST00000509927 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
FAT1-209ENST00000509927 CCDC180Q9P1Z9 1646 aa15.7■□□□□ 0.1
FAT1-209ENST00000509927 ABCC9O60706 1549 aa15.17■□□□□ 0.02
FAT1-209ENST00000509927 NACADO15069 1562 aa14.75□□□□□ -0.05
FAT1-209ENST00000509927 MYO15BQ96JP2 1530 aa14.73□□□□□ -0.05
FAT1-209ENST00000509927 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
FAT1-209ENST00000509927 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
FAT1-209ENST00000509927 DCAF8L2P0C7V8 631 aa14.69□□□□□ -0.06
FAT1-209ENST00000509927 DCAF1Q9Y4B6 1507 aa14.68□□□□□ -0.06
FAT1-209ENST00000509927 UNC13AQ9UPW8 1703 aa14.36□□□□□ -0.11
FAT1-209ENST00000509927 SCRIBQ14160 1630 aa14.22□□□□□ -0.13
FAT1-209ENST00000509927 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
FAT1-209ENST00000509927 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
FAT1-209ENST00000509927 SHROOM4Q9ULL8 1493 aa14.18□□□□□ -0.14
FAT1-209ENST00000509927 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
FAT1-209ENST00000509927 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
FAT1-209ENST00000509927 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
FAT1-209ENST00000509927 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
FAT1-209ENST00000509927 BAZ1AQ9NRL2 1556 aaPredicted RBP13.7□□□□□ -0.22
FAT1-209ENST00000509927 CECR2Q9BXF3 1484 aa13.68□□□□□ -0.22
FAT1-209ENST00000509927 SMARCA4P51532 1647 aa13.67□□□□□ -0.22
FAT1-209ENST00000509927 AEBP2Q6ZN18 517 aaPredicted RBP13.63□□□□□ -0.23
FAT1-209ENST00000509927 SMARCA2P51531 1590 aa13.61□□□□□ -0.23
FAT1-209ENST00000509927 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
FAT1-209ENST00000509927 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.23
FAT1-209ENST00000509927 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
FAT1-209ENST00000509927 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
FAT1-209ENST00000509927 HMGXB3Q12766 1538 aa13.53□□□□□ -0.24
FAT1-209ENST00000509927 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
FAT1-209ENST00000509927 RSF1Q96T23 1441 aaPredicted RBP13.47□□□□□ -0.25
FAT1-209ENST00000509927 WIZO95785 1651 aa13.43□□□□□ -0.26
FAT1-209ENST00000509927 TOP2AP11388 1531 aaKnown RBP13.31□□□□□ -0.28
FAT1-209ENST00000509927 LAMC3Q9Y6N6 1575 aa13.23□□□□□ -0.29
FAT1-209ENST00000509927 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
FAT1-209ENST00000509927 SUPT5HO00267 1087 aaKnown RBP13.16□□□□□ -0.3
FAT1-209ENST00000509927 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
FAT1-209ENST00000509927 PDS5BQ9NTI5 1447 aa13.14□□□□□ -0.31
FAT1-209ENST00000509927 NESP48681 1621 aa13.14□□□□□ -0.31
FAT1-209ENST00000509927 CFTRP13569 1480 aa13.13□□□□□ -0.31
FAT1-209ENST00000509927 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
FAT1-209ENST00000509927 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
FAT1-209ENST00000509927 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
FAT1-209ENST00000509927 FANCD2Q9BXW9 1451 aa13.01□□□□□ -0.33
FAT1-209ENST00000509927 CUX2O14529 1486 aa12.99□□□□□ -0.33
FAT1-209ENST00000509927 CEP164Q9UPV0 1460 aa12.98□□□□□ -0.33
FAT1-209ENST00000509927 THOC2Q8NI27 1593 aaKnown RBP12.95□□□□□ -0.34
FAT1-209ENST00000509927 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
FAT1-209ENST00000509927 ABCC8Q09428 1581 aa12.92□□□□□ -0.34
FAT1-209ENST00000509927 WDR62O43379 1518 aa12.9□□□□□ -0.34
FAT1-209ENST00000509927 URB2Q14146 1524 aaKnown RBP12.85□□□□□ -0.35
FAT1-209ENST00000509927 DNMBPQ6XZF7 1577 aa12.81□□□□□ -0.36
FAT1-209ENST00000509927 TOPBP1Q92547 1522 aa12.81□□□□□ -0.36
FAT1-209ENST00000509927 IFT140Q96RY7 1462 aa12.74□□□□□ -0.37
FAT1-209ENST00000509927 CUX1P39880 1505 aa12.72□□□□□ -0.37
FAT1-209ENST00000509927 WRNQ14191 1432 aaPredicted RBP eCLIP12.71□□□□□ -0.38
FAT1-209ENST00000509927 POLA1P09884 1462 aaPredicted RBP12.7□□□□□ -0.38
FAT1-209ENST00000509927 SOGA1O94964 1423 aa12.69□□□□□ -0.38
FAT1-209ENST00000509927 TOP2BQ02880 1626 aa12.68□□□□□ -0.38
FAT1-209ENST00000509927 BIVM-ERCC5R4GMW8 1640 aa12.68□□□□□ -0.38
FAT1-209ENST00000509927 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
FAT1-209ENST00000509927 TARBP1Q13395 1621 aaKnown RBP12.67□□□□□ -0.38
FAT1-209ENST00000509927 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
FAT1-209ENST00000509927 SYNJ1O43426 1573 aa12.62□□□□□ -0.39
FAT1-209ENST00000509927 RAD54L2Q9Y4B4 1467 aa12.61□□□□□ -0.39
FAT1-209ENST00000509927 ZNF608Q9ULD9 1512 aaPredicted RBP12.6□□□□□ -0.39
FAT1-209ENST00000509927 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
FAT1-209ENST00000509927 EIF4G3O43432 1585 aaKnown RBP12.57□□□□□ -0.4
FAT1-209ENST00000509927 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
FAT1-209ENST00000509927 TDRD9Q8NDG6 1382 aaKnown RBP12.56□□□□□ -0.4
FAT1-209ENST00000509927 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
FAT1-209ENST00000509927 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
FAT1-209ENST00000509927 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
FAT1-209ENST00000509927 OSCARQ8IYS5 282 aa12.5□□□□□ -0.41
FAT1-209ENST00000509927 DNAJC5Q9H3Z4 198 aa12.5□□□□□ -0.41
FAT1-209ENST00000509927 MAGI1Q96QZ7 1491 aaPredicted RBP12.49□□□□□ -0.41
FAT1-209ENST00000509927 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
FAT1-209ENST00000509927 PBRM1Q86U86 1689 aa12.48□□□□□ -0.41
FAT1-209ENST00000509927 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
FAT1-209ENST00000509927 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
FAT1-209ENST00000509927 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
FAT1-209ENST00000509927 SYNJ2O15056 1496 aa12.43□□□□□ -0.42
FAT1-209ENST00000509927 SNAPC4Q5SXM2 1469 aa12.43□□□□□ -0.42
FAT1-209ENST00000509927 CHD1O14646 1710 aa12.41□□□□□ -0.42
FAT1-209ENST00000509927 FBLN2P98095 1184 aa12.41□□□□□ -0.42
FAT1-209ENST00000509927 FHAD1B1AJZ9 1412 aa12.4□□□□□ -0.42
FAT1-209ENST00000509927 IGF1RP08069 1367 aa12.4□□□□□ -0.42
FAT1-209ENST00000509927 CUL7Q14999 1698 aa12.36□□□□□ -0.43
FAT1-209ENST00000509927 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
FAT1-209ENST00000509927 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
FAT1-209ENST00000509927 GRIN2AQ12879 1464 aa12.34□□□□□ -0.43
FAT1-209ENST00000509927 CARMIL1Q5VZK9 1371 aa12.32□□□□□ -0.44
FAT1-209ENST00000509927 EEA1Q15075 1411 aa12.32□□□□□ -0.44
FAT1-209ENST00000509927 NUP160Q12769 1436 aa12.29□□□□□ -0.44
FAT1-209ENST00000509927 CLASP1Q7Z460 1538 aa12.28□□□□□ -0.44
FAT1-209ENST00000509927 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
FAT1-209ENST00000509927 CSRNP3Q8WYN3 585 aa12.27□□□□□ -0.45
FAT1-209ENST00000509927 RAPGEF2Q9Y4G8 1499 aa12.26□□□□□ -0.45
FAT1-209ENST00000509927 CEP170Q5SW79 1584 aa12.24□□□□□ -0.45
FAT1-209ENST00000509927 KIAA0586Q9BVV6 1533 aa12.22□□□□□ -0.45
FAT1-209ENST00000509927 PRXQ9BXM0 1461 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms