RNA–Protein interactions for RNA: ENST00000509861.1

CSF1R-204, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 2

Gene CSF1R, Length 886 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-204ENST00000509861 NISCHQ9Y2I1 1504 aa28.63■■■□□ 2.17
CSF1R-204ENST00000509861 CCDC180Q9P1Z9 1646 aa25.39■■□□□ 1.66
CSF1R-204ENST00000509861 ABCC9O60706 1549 aa24.78■■□□□ 1.56
CSF1R-204ENST00000509861 DCAF8L2P0C7V8 631 aa23.89■■□□□ 1.41
CSF1R-204ENST00000509861 NACADO15069 1562 aa23.87■■□□□ 1.41
CSF1R-204ENST00000509861 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
CSF1R-204ENST00000509861 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
CSF1R-204ENST00000509861 MYO15BQ96JP2 1530 aa23.76■■□□□ 1.39
CSF1R-204ENST00000509861 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
CSF1R-204ENST00000509861 UNC13AQ9UPW8 1703 aa23.29■■□□□ 1.32
CSF1R-204ENST00000509861 PABPN1Q86U42 306 aaKnown RBP eCLIP23.18■■□□□ 1.3
CSF1R-204ENST00000509861 SCRIBQ14160 1630 aa23.18■■□□□ 1.3
CSF1R-204ENST00000509861 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
CSF1R-204ENST00000509861 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
CSF1R-204ENST00000509861 DNAJC5BQ9UF47 199 aa22.68■■□□□ 1.22
CSF1R-204ENST00000509861 EIF4G1Q04637 1599 aaKnown RBP22.52■■□□□ 1.2
CSF1R-204ENST00000509861 CC2D2AQ9P2K1 1620 aa22.41■■□□□ 1.18
CSF1R-204ENST00000509861 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
CSF1R-204ENST00000509861 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
CSF1R-204ENST00000509861 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
CSF1R-204ENST00000509861 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
CSF1R-204ENST00000509861 MROH2BQ7Z745 1585 aa22.06■■□□□ 1.12
CSF1R-204ENST00000509861 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
CSF1R-204ENST00000509861 SMARCA2P51531 1590 aa22.03■■□□□ 1.12
CSF1R-204ENST00000509861 PEG3Q9GZU2 1588 aa21.97■■□□□ 1.11
CSF1R-204ENST00000509861 HMGXB3Q12766 1538 aa21.92■■□□□ 1.1
CSF1R-204ENST00000509861 BAZ1BQ9UIG0 1483 aaKnown RBP21.88■■□□□ 1.09
CSF1R-204ENST00000509861 RSF1Q96T23 1441 aaPredicted RBP21.85■■□□□ 1.09
CSF1R-204ENST00000509861 WIZO95785 1651 aa21.81■■□□□ 1.08
CSF1R-204ENST00000509861 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
CSF1R-204ENST00000509861 NESP48681 1621 aa21.46■■□□□ 1.03
CSF1R-204ENST00000509861 LAMC3Q9Y6N6 1575 aa21.42■■□□□ 1.02
CSF1R-204ENST00000509861 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
CSF1R-204ENST00000509861 SUPT5HO00267 1087 aaKnown RBP21.36■■□□□ 1.01
CSF1R-204ENST00000509861 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
CSF1R-204ENST00000509861 ERCC6Q03468 1493 aa21.35■■□□□ 1.01
CSF1R-204ENST00000509861 PDS5BQ9NTI5 1447 aa21.29■■□□□ 1
CSF1R-204ENST00000509861 CFTRP13569 1480 aa21.29■■□□□ 1
CSF1R-204ENST00000509861 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
CSF1R-204ENST00000509861 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.98
CSF1R-204ENST00000509861 CEP164Q9UPV0 1460 aa21.11■□□□□ 0.97
CSF1R-204ENST00000509861 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
CSF1R-204ENST00000509861 CUX2O14529 1486 aa21.09■□□□□ 0.97
CSF1R-204ENST00000509861 PRDM2Q13029 1718 aa21.09■□□□□ 0.97
CSF1R-204ENST00000509861 MRC2Q9UBG0 1479 aa21.07■□□□□ 0.96
CSF1R-204ENST00000509861 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
CSF1R-204ENST00000509861 WDR62O43379 1518 aa20.99■□□□□ 0.95
CSF1R-204ENST00000509861 URB2Q14146 1524 aaKnown RBP20.93■□□□□ 0.94
CSF1R-204ENST00000509861 ABCC8Q09428 1581 aa20.83■□□□□ 0.92
CSF1R-204ENST00000509861 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
CSF1R-204ENST00000509861 DNMBPQ6XZF7 1577 aa20.79■□□□□ 0.92
CSF1R-204ENST00000509861 CUX1P39880 1505 aa20.68■□□□□ 0.9
CSF1R-204ENST00000509861 IFT140Q96RY7 1462 aa20.67■□□□□ 0.9
CSF1R-204ENST00000509861 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
CSF1R-204ENST00000509861 FGD5Q6ZNL6 1462 aa20.61■□□□□ 0.89
CSF1R-204ENST00000509861 WRNQ14191 1432 aaPredicted RBP eCLIP20.6■□□□□ 0.89
CSF1R-204ENST00000509861 CHIC1Q5VXU3 224 aa20.58■□□□□ 0.89
CSF1R-204ENST00000509861 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
CSF1R-204ENST00000509861 SOGA1O94964 1423 aa20.57■□□□□ 0.88
CSF1R-204ENST00000509861 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
CSF1R-204ENST00000509861 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
CSF1R-204ENST00000509861 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
CSF1R-204ENST00000509861 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
CSF1R-204ENST00000509861 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
CSF1R-204ENST00000509861 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
CSF1R-204ENST00000509861 AQRO60306 1485 aaKnown RBP eCLIP20.46■□□□□ 0.87
CSF1R-204ENST00000509861 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
CSF1R-204ENST00000509861 ABCA10Q8WWZ4 1543 aa20.42■□□□□ 0.86
CSF1R-204ENST00000509861 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
CSF1R-204ENST00000509861 DNAJC5Q9H3Z4 198 aa20.37■□□□□ 0.85
CSF1R-204ENST00000509861 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
CSF1R-204ENST00000509861 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
CSF1R-204ENST00000509861 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
CSF1R-204ENST00000509861 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
CSF1R-204ENST00000509861 OSCARQ8IYS5 282 aa20.26■□□□□ 0.83
CSF1R-204ENST00000509861 MAGI1Q96QZ7 1491 aaPredicted RBP20.25■□□□□ 0.83
CSF1R-204ENST00000509861 PBRM1Q86U86 1689 aa20.25■□□□□ 0.83
CSF1R-204ENST00000509861 FBLN2P98095 1184 aa20.2■□□□□ 0.82
CSF1R-204ENST00000509861 CHD1O14646 1710 aa20.19■□□□□ 0.82
CSF1R-204ENST00000509861 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
CSF1R-204ENST00000509861 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
CSF1R-204ENST00000509861 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
CSF1R-204ENST00000509861 KIF27Q86VH2 1401 aa20.17■□□□□ 0.82
CSF1R-204ENST00000509861 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
CSF1R-204ENST00000509861 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
CSF1R-204ENST00000509861 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
CSF1R-204ENST00000509861 IGF1RP08069 1367 aa20.08■□□□□ 0.8
CSF1R-204ENST00000509861 GRIN2AQ12879 1464 aa20.05■□□□□ 0.8
CSF1R-204ENST00000509861 CLASP1Q7Z460 1538 aa19.99■□□□□ 0.79
CSF1R-204ENST00000509861 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
CSF1R-204ENST00000509861 CUL7Q14999 1698 aa19.99■□□□□ 0.79
CSF1R-204ENST00000509861 NUP160Q12769 1436 aa19.96■□□□□ 0.79
CSF1R-204ENST00000509861 CARMIL1Q5VZK9 1371 aa19.95■□□□□ 0.79
CSF1R-204ENST00000509861 CEP170Q5SW79 1584 aa19.93■□□□□ 0.78
CSF1R-204ENST00000509861 ARHGEF11O15085 1522 aa19.91■□□□□ 0.78
CSF1R-204ENST00000509861 RIMBP3CA6NJZ7 1639 aa19.88■□□□□ 0.77
CSF1R-204ENST00000509861 RIMBP3BA6NNM3 1639 aa19.88■□□□□ 0.77
CSF1R-204ENST00000509861 RIMBP3Q9UFD9 1639 aa19.88■□□□□ 0.77
CSF1R-204ENST00000509861 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
CSF1R-204ENST00000509861 EEA1Q15075 1411 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms