RNA–Protein interactions for RNA: ENST00000509841.1

TNIP3-204, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-204ENST00000509841 NISCHQ9Y2I1 1504 aa24.14■■□□□ 1.45
TNIP3-204ENST00000509841 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
TNIP3-204ENST00000509841 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
TNIP3-204ENST00000509841 CCDC180Q9P1Z9 1646 aa21.14■□□□□ 0.98
TNIP3-204ENST00000509841 ZCCHC6Q5VYS8 1495 aaKnown RBP20.29■□□□□ 0.84
TNIP3-204ENST00000509841 DCAF1Q9Y4B6 1507 aa20.06■□□□□ 0.8
TNIP3-204ENST00000509841 MYO15BQ96JP2 1530 aa19.84■□□□□ 0.77
TNIP3-204ENST00000509841 DCAF8L2P0C7V8 631 aa19.79■□□□□ 0.76
TNIP3-204ENST00000509841 ABCC9O60706 1549 aa19.76■□□□□ 0.75
TNIP3-204ENST00000509841 NACADO15069 1562 aa19.67■□□□□ 0.74
TNIP3-204ENST00000509841 SHROOM4Q9ULL8 1493 aa19.54■□□□□ 0.72
TNIP3-204ENST00000509841 RB1CC1Q8TDY2 1594 aa19.48■□□□□ 0.71
TNIP3-204ENST00000509841 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
TNIP3-204ENST00000509841 UNC13AQ9UPW8 1703 aa18.98■□□□□ 0.63
TNIP3-204ENST00000509841 SUPT5HO00267 1087 aaKnown RBP18.86■□□□□ 0.61
TNIP3-204ENST00000509841 PHF23Q9BUL5 403 aaPredicted RBP18.8■□□□□ 0.6
TNIP3-204ENST00000509841 BICRAQ9NZM4 1560 aa18.77■□□□□ 0.6
TNIP3-204ENST00000509841 RSF1Q96T23 1441 aaPredicted RBP18.69■□□□□ 0.58
TNIP3-204ENST00000509841 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
TNIP3-204ENST00000509841 CECR2Q9BXF3 1484 aa18.63■□□□□ 0.57
TNIP3-204ENST00000509841 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
TNIP3-204ENST00000509841 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
TNIP3-204ENST00000509841 SMARCA4P51532 1647 aa18.55■□□□□ 0.56
TNIP3-204ENST00000509841 WIZO95785 1651 aa18.43■□□□□ 0.54
TNIP3-204ENST00000509841 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
TNIP3-204ENST00000509841 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.53
TNIP3-204ENST00000509841 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
TNIP3-204ENST00000509841 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
TNIP3-204ENST00000509841 ATAD2BQ9ULI0 1458 aa18.21■□□□□ 0.51
TNIP3-204ENST00000509841 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
TNIP3-204ENST00000509841 HMGXB3Q12766 1538 aa18.12■□□□□ 0.49
TNIP3-204ENST00000509841 NCAPD3P42695 1498 aa18.1■□□□□ 0.49
TNIP3-204ENST00000509841 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
TNIP3-204ENST00000509841 SENP3Q9H4L4 574 aaPredicted RBP18.06■□□□□ 0.48
TNIP3-204ENST00000509841 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
TNIP3-204ENST00000509841 CC2D2AQ9P2K1 1620 aa17.94■□□□□ 0.46
TNIP3-204ENST00000509841 TRIM41Q8WV44 630 aa17.83■□□□□ 0.45
TNIP3-204ENST00000509841 CFTRP13569 1480 aa17.69■□□□□ 0.42
TNIP3-204ENST00000509841 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
TNIP3-204ENST00000509841 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
TNIP3-204ENST00000509841 WRNQ14191 1432 aaPredicted RBP eCLIP17.64■□□□□ 0.42
TNIP3-204ENST00000509841 CADPSQ9ULU8 1353 aa17.61■□□□□ 0.41
TNIP3-204ENST00000509841 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
TNIP3-204ENST00000509841 EEA1Q15075 1411 aa17.52■□□□□ 0.4
TNIP3-204ENST00000509841 LAMC3Q9Y6N6 1575 aa17.52■□□□□ 0.39
TNIP3-204ENST00000509841 TOP2BQ02880 1626 aa17.51■□□□□ 0.39
TNIP3-204ENST00000509841 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
TNIP3-204ENST00000509841 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
TNIP3-204ENST00000509841 FANCD2Q9BXW9 1451 aa17.41■□□□□ 0.38
TNIP3-204ENST00000509841 CUX1P39880 1505 aa17.39■□□□□ 0.37
TNIP3-204ENST00000509841 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
TNIP3-204ENST00000509841 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
TNIP3-204ENST00000509841 CEP164Q9UPV0 1460 aa17.34■□□□□ 0.37
TNIP3-204ENST00000509841 NESP48681 1621 aa17.33■□□□□ 0.36
TNIP3-204ENST00000509841 SOGA1O94964 1423 aa17.33■□□□□ 0.36
TNIP3-204ENST00000509841 LOC105371045A0A1W2PR82 267 aa17.32■□□□□ 0.36
TNIP3-204ENST00000509841 DNMBPQ6XZF7 1577 aa17.31■□□□□ 0.36
TNIP3-204ENST00000509841 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
TNIP3-204ENST00000509841 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
TNIP3-204ENST00000509841 KIF21BO75037 1637 aa17.23■□□□□ 0.35
TNIP3-204ENST00000509841 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
TNIP3-204ENST00000509841 RUSC2Q8N2Y8 1516 aa17.22■□□□□ 0.35
TNIP3-204ENST00000509841 FGD5Q6ZNL6 1462 aa17.21■□□□□ 0.35
TNIP3-204ENST00000509841 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
TNIP3-204ENST00000509841 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
TNIP3-204ENST00000509841 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
TNIP3-204ENST00000509841 TNIKQ9UKE5 1360 aa17.14■□□□□ 0.33
TNIP3-204ENST00000509841 POLA1P09884 1462 aaPredicted RBP17.13■□□□□ 0.33
TNIP3-204ENST00000509841 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
TNIP3-204ENST00000509841 CUX2O14529 1486 aa17.12■□□□□ 0.33
TNIP3-204ENST00000509841 MRC2Q9UBG0 1479 aa17.12■□□□□ 0.33
TNIP3-204ENST00000509841 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
TNIP3-204ENST00000509841 PRXQ9BXM0 1461 aa17.08■□□□□ 0.32
TNIP3-204ENST00000509841 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
TNIP3-204ENST00000509841 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
TNIP3-204ENST00000509841 EHMT2Q96KQ7 1210 aa17.04■□□□□ 0.32
TNIP3-204ENST00000509841 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
TNIP3-204ENST00000509841 WDR62O43379 1518 aa17.02■□□□□ 0.32
TNIP3-204ENST00000509841 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
TNIP3-204ENST00000509841 RAPGEF2Q9Y4G8 1499 aa17.01■□□□□ 0.31
TNIP3-204ENST00000509841 RAD54L2Q9Y4B4 1467 aa17■□□□□ 0.31
TNIP3-204ENST00000509841 IGF1RP08069 1367 aa16.99■□□□□ 0.31
TNIP3-204ENST00000509841 CUL7Q14999 1698 aa16.98■□□□□ 0.31
TNIP3-204ENST00000509841 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
TNIP3-204ENST00000509841 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.31
TNIP3-204ENST00000509841 CARMIL1Q5VZK9 1371 aa16.94■□□□□ 0.3
TNIP3-204ENST00000509841 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
TNIP3-204ENST00000509841 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
TNIP3-204ENST00000509841 GAPVD1Q14C86 1478 aa16.91■□□□□ 0.3
TNIP3-204ENST00000509841 CLIP1P30622 1438 aa16.89■□□□□ 0.29
TNIP3-204ENST00000509841 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
TNIP3-204ENST00000509841 PBRM1Q86U86 1689 aa16.83■□□□□ 0.29
TNIP3-204ENST00000509841 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
TNIP3-204ENST00000509841 VPS8Q8N3P4 1428 aa16.77■□□□□ 0.27
TNIP3-204ENST00000509841 CTTNBP2Q8WZ74 1663 aa16.77■□□□□ 0.27
TNIP3-204ENST00000509841 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
TNIP3-204ENST00000509841 TRIM26Q12899 539 aaPredicted RBP16.74■□□□□ 0.27
TNIP3-204ENST00000509841 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
TNIP3-204ENST00000509841 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
TNIP3-204ENST00000509841 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms