RNA–Protein interactions for RNA: ENST00000509788.1

SNHG18-202, Transcript of small nucleolar RNA host gene 18, humanhuman

TSL 2

Gene SNHG18, Length 842 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG18-202ENST00000509788 NISCHQ9Y2I1 1504 aa35.56■■■■□ 3.28
SNHG18-202ENST00000509788 ABCC9O60706 1549 aa32.73■■■□□ 2.83
SNHG18-202ENST00000509788 CCDC180Q9P1Z9 1646 aa32.09■■■□□ 2.73
SNHG18-202ENST00000509788 DNAJC5BQ9UF47 199 aa31.35■■■□□ 2.61
SNHG18-202ENST00000509788 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
SNHG18-202ENST00000509788 NACADO15069 1562 aa30.53■■■□□ 2.48
SNHG18-202ENST00000509788 PABPN1Q86U42 306 aaKnown RBP eCLIP30.42■■■□□ 2.46
SNHG18-202ENST00000509788 DCAF8L2P0C7V8 631 aa30.22■■■□□ 2.43
SNHG18-202ENST00000509788 UNC13AQ9UPW8 1703 aa30.13■■■□□ 2.41
SNHG18-202ENST00000509788 BICRAQ9NZM4 1560 aa30.05■■■□□ 2.4
SNHG18-202ENST00000509788 MYO15BQ96JP2 1530 aa29.95■■■□□ 2.38
SNHG18-202ENST00000509788 CECR2Q9BXF3 1484 aa29.56■■■□□ 2.32
SNHG18-202ENST00000509788 SHROOM4Q9ULL8 1493 aa29.55■■■□□ 2.32
SNHG18-202ENST00000509788 CC2D2AQ9P2K1 1620 aa29.53■■■□□ 2.32
SNHG18-202ENST00000509788 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
SNHG18-202ENST00000509788 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
SNHG18-202ENST00000509788 EIF4G1Q04637 1599 aaKnown RBP29.33■■■□□ 2.29
SNHG18-202ENST00000509788 SCRIBQ14160 1630 aa29.22■■■□□ 2.27
SNHG18-202ENST00000509788 DNAJC5Q9H3Z4 198 aa29.19■■■□□ 2.26
SNHG18-202ENST00000509788 CUX2O14529 1486 aa28.46■■■□□ 2.15
SNHG18-202ENST00000509788 ERCC6Q03468 1493 aa28.27■■■□□ 2.12
SNHG18-202ENST00000509788 NCAPD3P42695 1498 aa28.25■■■□□ 2.11
SNHG18-202ENST00000509788 ATAD2BQ9ULI0 1458 aa28.06■■■□□ 2.08
SNHG18-202ENST00000509788 NESP48681 1621 aa27.98■■■□□ 2.07
SNHG18-202ENST00000509788 HMGXB3Q12766 1538 aa27.93■■■□□ 2.06
SNHG18-202ENST00000509788 SMARCA2P51531 1590 aa27.9■■■□□ 2.06
SNHG18-202ENST00000509788 SMARCA4P51532 1647 aa27.83■■■□□ 2.05
SNHG18-202ENST00000509788 THOC2Q8NI27 1593 aaKnown RBP27.77■■■□□ 2.04
SNHG18-202ENST00000509788 BAZ1BQ9UIG0 1483 aaKnown RBP27.71■■■□□ 2.03
SNHG18-202ENST00000509788 LAMC3Q9Y6N6 1575 aa27.63■■■□□ 2.01
SNHG18-202ENST00000509788 PEG3Q9GZU2 1588 aa27.6■■■□□ 2.01
SNHG18-202ENST00000509788 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
SNHG18-202ENST00000509788 TRIM41Q8WV44 630 aa27.58■■■□□ 2.01
SNHG18-202ENST00000509788 PDS5BQ9NTI5 1447 aa27.51■■□□□ 1.99
SNHG18-202ENST00000509788 KIF21AQ7Z4S6 1674 aa27.51■■□□□ 1.99
SNHG18-202ENST00000509788 MROH2BQ7Z745 1585 aa27.4■■□□□ 1.98
SNHG18-202ENST00000509788 CADPSQ9ULU8 1353 aa27.35■■□□□ 1.97
SNHG18-202ENST00000509788 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
SNHG18-202ENST00000509788 WDR62O43379 1518 aa27.27■■□□□ 1.96
SNHG18-202ENST00000509788 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
SNHG18-202ENST00000509788 OSCARQ8IYS5 282 aa27.07■■□□□ 1.92
SNHG18-202ENST00000509788 FANCD2Q9BXW9 1451 aa27.01■■□□□ 1.91
SNHG18-202ENST00000509788 WIZO95785 1651 aa26.99■■□□□ 1.91
SNHG18-202ENST00000509788 CFTRP13569 1480 aa26.91■■□□□ 1.9
SNHG18-202ENST00000509788 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
SNHG18-202ENST00000509788 RIMBP3CA6NJZ7 1639 aa26.75■■□□□ 1.87
SNHG18-202ENST00000509788 RIMBP3BA6NNM3 1639 aa26.75■■□□□ 1.87
SNHG18-202ENST00000509788 RIMBP3Q9UFD9 1639 aa26.75■■□□□ 1.87
SNHG18-202ENST00000509788 ARHGEF11O15085 1522 aa26.64■■□□□ 1.85
SNHG18-202ENST00000509788 RSF1Q96T23 1441 aaPredicted RBP26.64■■□□□ 1.85
SNHG18-202ENST00000509788 TOP2AP11388 1531 aaKnown RBP26.62■■□□□ 1.85
SNHG18-202ENST00000509788 ZNF608Q9ULD9 1512 aaPredicted RBP26.62■■□□□ 1.85
SNHG18-202ENST00000509788 IFT140Q96RY7 1462 aa26.56■■□□□ 1.84
SNHG18-202ENST00000509788 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
SNHG18-202ENST00000509788 PRDM2Q13029 1718 aa26.45■■□□□ 1.82
SNHG18-202ENST00000509788 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
SNHG18-202ENST00000509788 EIF4G3O43432 1585 aaKnown RBP26.38■■□□□ 1.81
SNHG18-202ENST00000509788 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
SNHG18-202ENST00000509788 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
SNHG18-202ENST00000509788 TRHP20396 242 aaPredicted RBP26.33■■□□□ 1.81
SNHG18-202ENST00000509788 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
SNHG18-202ENST00000509788 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
SNHG18-202ENST00000509788 CHD1O14646 1710 aa26.26■■□□□ 1.79
SNHG18-202ENST00000509788 DNMBPQ6XZF7 1577 aa26.25■■□□□ 1.79
SNHG18-202ENST00000509788 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
SNHG18-202ENST00000509788 FBLN2P98095 1184 aa26.19■■□□□ 1.78
SNHG18-202ENST00000509788 POLA1P09884 1462 aaPredicted RBP26.13■■□□□ 1.77
SNHG18-202ENST00000509788 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
SNHG18-202ENST00000509788 TDRD9Q8NDG6 1382 aaKnown RBP26.05■■□□□ 1.76
SNHG18-202ENST00000509788 CLASP1Q7Z460 1538 aa26.03■■□□□ 1.76
SNHG18-202ENST00000509788 SOGA1O94964 1423 aa25.99■■□□□ 1.75
SNHG18-202ENST00000509788 SNAPC4Q5SXM2 1469 aa25.98■■□□□ 1.75
SNHG18-202ENST00000509788 AEBP2Q6ZN18 517 aaPredicted RBP25.97■■□□□ 1.75
SNHG18-202ENST00000509788 CHMP7Q8WUX9 453 aaPredicted RBP25.91■■□□□ 1.74
SNHG18-202ENST00000509788 MAGI1Q96QZ7 1491 aaPredicted RBP25.89■■□□□ 1.73
SNHG18-202ENST00000509788 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
SNHG18-202ENST00000509788 WDR97A6NE52 1622 aa25.88■■□□□ 1.73
SNHG18-202ENST00000509788 FGD5Q6ZNL6 1462 aa25.87■■□□□ 1.73
SNHG18-202ENST00000509788 GRIN2BQ13224 1484 aa25.83■■□□□ 1.73
SNHG18-202ENST00000509788 SYNJ2O15056 1496 aa25.82■■□□□ 1.72
SNHG18-202ENST00000509788 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
SNHG18-202ENST00000509788 CUX1P39880 1505 aa25.78■■□□□ 1.72
SNHG18-202ENST00000509788 PBRM1Q86U86 1689 aa25.61■■□□□ 1.69
SNHG18-202ENST00000509788 ERCC6L2Q5T890 1561 aa25.59■■□□□ 1.69
SNHG18-202ENST00000509788 ABCA10Q8WWZ4 1543 aa25.56■■□□□ 1.68
SNHG18-202ENST00000509788 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
SNHG18-202ENST00000509788 GRIN2AQ12879 1464 aa25.51■■□□□ 1.67
SNHG18-202ENST00000509788 NUP160Q12769 1436 aa25.47■■□□□ 1.67
SNHG18-202ENST00000509788 CEP170Q5SW79 1584 aa25.47■■□□□ 1.67
SNHG18-202ENST00000509788 ADAMTS12P58397 1594 aa25.39■■□□□ 1.66
SNHG18-202ENST00000509788 SHROOM2Q13796 1616 aa25.39■■□□□ 1.66
SNHG18-202ENST00000509788 KIF13AQ9H1H9 1805 aa25.35■■□□□ 1.65
SNHG18-202ENST00000509788 WRNQ14191 1432 aaPredicted RBP eCLIP25.33■■□□□ 1.65
SNHG18-202ENST00000509788 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
SNHG18-202ENST00000509788 PRG4Q92954 1404 aaPredicted RBP25.25■■□□□ 1.63
SNHG18-202ENST00000509788 JPH4Q96JJ6 628 aa25.2■■□□□ 1.62
SNHG18-202ENST00000509788 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
SNHG18-202ENST00000509788 ABCC10Q5T3U5 1492 aa25.2■■□□□ 1.62
SNHG18-202ENST00000509788 FAM69CQ0P6D2 419 aa25.19■■□□□ 1.62
SNHG18-202ENST00000509788 TOP2BQ02880 1626 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms