RNA–Protein interactions for RNA: ENST00000509553.1

SH3TC1-218, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-218ENST00000509553 NISCHQ9Y2I1 1504 aa36.61■■■■□ 3.45
SH3TC1-218ENST00000509553 CCDC180Q9P1Z9 1646 aa32.38■■■□□ 2.77
SH3TC1-218ENST00000509553 ABCC9O60706 1549 aa31.39■■■□□ 2.62
SH3TC1-218ENST00000509553 ZCCHC6Q5VYS8 1495 aaKnown RBP30.61■■■□□ 2.49
SH3TC1-218ENST00000509553 DCAF8L2P0C7V8 631 aa30.39■■■□□ 2.46
SH3TC1-218ENST00000509553 NACADO15069 1562 aa30.25■■■□□ 2.43
SH3TC1-218ENST00000509553 DCAF1Q9Y4B6 1507 aa30.25■■■□□ 2.43
SH3TC1-218ENST00000509553 RB1CC1Q8TDY2 1594 aa30.19■■■□□ 2.42
SH3TC1-218ENST00000509553 MYO15BQ96JP2 1530 aa30.16■■■□□ 2.42
SH3TC1-218ENST00000509553 UNC13AQ9UPW8 1703 aa29.75■■■□□ 2.35
SH3TC1-218ENST00000509553 SCRIBQ14160 1630 aa29.64■■■□□ 2.34
SH3TC1-218ENST00000509553 BICRAQ9NZM4 1560 aa29.35■■■□□ 2.29
SH3TC1-218ENST00000509553 SHROOM4Q9ULL8 1493 aa29.3■■■□□ 2.28
SH3TC1-218ENST00000509553 PABPN1Q86U42 306 aaKnown RBP eCLIP29.3■■■□□ 2.28
SH3TC1-218ENST00000509553 DNAJC5BQ9UF47 199 aa29.14■■■□□ 2.26
SH3TC1-218ENST00000509553 CECR2Q9BXF3 1484 aa28.53■■■□□ 2.16
SH3TC1-218ENST00000509553 EIF4G1Q04637 1599 aaKnown RBP28.49■■■□□ 2.15
SH3TC1-218ENST00000509553 CC2D2AQ9P2K1 1620 aa28.43■■■□□ 2.14
SH3TC1-218ENST00000509553 SMARCA4P51532 1647 aa28.36■■■□□ 2.13
SH3TC1-218ENST00000509553 BAZ1AQ9NRL2 1556 aaPredicted RBP28.33■■■□□ 2.12
SH3TC1-218ENST00000509553 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
SH3TC1-218ENST00000509553 WIZO95785 1651 aa28.07■■■□□ 2.08
SH3TC1-218ENST00000509553 RSF1Q96T23 1441 aaPredicted RBP28.07■■■□□ 2.08
SH3TC1-218ENST00000509553 PEG3Q9GZU2 1588 aa28.01■■■□□ 2.07
SH3TC1-218ENST00000509553 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
SH3TC1-218ENST00000509553 SMARCA2P51531 1590 aa27.99■■■□□ 2.07
SH3TC1-218ENST00000509553 NCAPD3P42695 1498 aa27.88■■■□□ 2.05
SH3TC1-218ENST00000509553 HMGXB3Q12766 1538 aa27.82■■■□□ 2.04
SH3TC1-218ENST00000509553 BAZ1BQ9UIG0 1483 aaKnown RBP27.81■■■□□ 2.04
SH3TC1-218ENST00000509553 SUPT5HO00267 1087 aaKnown RBP27.76■■■□□ 2.03
SH3TC1-218ENST00000509553 TOP2AP11388 1531 aaKnown RBP27.7■■■□□ 2.02
SH3TC1-218ENST00000509553 CCDC88BA6NC98 1476 aa27.37■■□□□ 1.97
SH3TC1-218ENST00000509553 NESP48681 1621 aa27.19■■□□□ 1.94
SH3TC1-218ENST00000509553 LAMC3Q9Y6N6 1575 aa27.11■■□□□ 1.93
SH3TC1-218ENST00000509553 PRDM2Q13029 1718 aa27.09■■□□□ 1.93
SH3TC1-218ENST00000509553 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
SH3TC1-218ENST00000509553 CFTRP13569 1480 aa27.06■■□□□ 1.92
SH3TC1-218ENST00000509553 ERCC6Q03468 1493 aa26.97■■□□□ 1.91
SH3TC1-218ENST00000509553 KIF21AQ7Z4S6 1674 aa26.97■■□□□ 1.91
SH3TC1-218ENST00000509553 PDS5BQ9NTI5 1447 aa26.83■■□□□ 1.89
SH3TC1-218ENST00000509553 CUX2O14529 1486 aa26.82■■□□□ 1.88
SH3TC1-218ENST00000509553 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
SH3TC1-218ENST00000509553 THOC2Q8NI27 1593 aaKnown RBP26.8■■□□□ 1.88
SH3TC1-218ENST00000509553 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
SH3TC1-218ENST00000509553 ABCC8Q09428 1581 aa26.62■■□□□ 1.85
SH3TC1-218ENST00000509553 MRC2Q9UBG0 1479 aa26.6■■□□□ 1.85
SH3TC1-218ENST00000509553 URB2Q14146 1524 aaKnown RBP26.57■■□□□ 1.84
SH3TC1-218ENST00000509553 WDR62O43379 1518 aa26.52■■□□□ 1.84
SH3TC1-218ENST00000509553 DNMBPQ6XZF7 1577 aa26.5■■□□□ 1.83
SH3TC1-218ENST00000509553 CUX1P39880 1505 aa26.49■■□□□ 1.83
SH3TC1-218ENST00000509553 TOPBP1Q92547 1522 aa26.48■■□□□ 1.83
SH3TC1-218ENST00000509553 SYNJ1O43426 1573 aa26.46■■□□□ 1.83
SH3TC1-218ENST00000509553 WRNQ14191 1432 aaPredicted RBP eCLIP26.44■■□□□ 1.82
SH3TC1-218ENST00000509553 BIVM-ERCC5R4GMW8 1640 aa26.42■■□□□ 1.82
SH3TC1-218ENST00000509553 TOP2BQ02880 1626 aa26.39■■□□□ 1.81
SH3TC1-218ENST00000509553 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
SH3TC1-218ENST00000509553 DNAJC5Q9H3Z4 198 aa26.3■■□□□ 1.8
SH3TC1-218ENST00000509553 POLA1P09884 1462 aaPredicted RBP26.28■■□□□ 1.8
SH3TC1-218ENST00000509553 TARBP1Q13395 1621 aaKnown RBP26.21■■□□□ 1.79
SH3TC1-218ENST00000509553 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
SH3TC1-218ENST00000509553 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
SH3TC1-218ENST00000509553 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
SH3TC1-218ENST00000509553 SOGA1O94964 1423 aa26.14■■□□□ 1.78
SH3TC1-218ENST00000509553 TRIM41Q8WV44 630 aa26.13■■□□□ 1.77
SH3TC1-218ENST00000509553 IFT140Q96RY7 1462 aa26.12■■□□□ 1.77
SH3TC1-218ENST00000509553 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
SH3TC1-218ENST00000509553 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
SH3TC1-218ENST00000509553 EIF4G3O43432 1585 aaKnown RBP26.01■■□□□ 1.75
SH3TC1-218ENST00000509553 TDRD9Q8NDG6 1382 aaKnown RBP25.96■■□□□ 1.75
SH3TC1-218ENST00000509553 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
SH3TC1-218ENST00000509553 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.74
SH3TC1-218ENST00000509553 PBRM1Q86U86 1689 aa25.93■■□□□ 1.74
SH3TC1-218ENST00000509553 RUSC2Q8N2Y8 1516 aa25.88■■□□□ 1.73
SH3TC1-218ENST00000509553 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
SH3TC1-218ENST00000509553 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
SH3TC1-218ENST00000509553 GRIN2BQ13224 1484 aa25.77■■□□□ 1.72
SH3TC1-218ENST00000509553 ERICH3Q5RHP9 1530 aa25.73■■□□□ 1.71
SH3TC1-218ENST00000509553 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
SH3TC1-218ENST00000509553 FAM9AQ8IZU1 332 aaPredicted RBP25.68■■□□□ 1.7
SH3TC1-218ENST00000509553 CHD1O14646 1710 aa25.68■■□□□ 1.7
SH3TC1-218ENST00000509553 ADAMTS12P58397 1594 aa25.67■■□□□ 1.7
SH3TC1-218ENST00000509553 IGF1RP08069 1367 aa25.66■■□□□ 1.7
SH3TC1-218ENST00000509553 MAGI1Q96QZ7 1491 aaPredicted RBP25.65■■□□□ 1.7
SH3TC1-218ENST00000509553 CUL7Q14999 1698 aa25.64■■□□□ 1.7
SH3TC1-218ENST00000509553 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
SH3TC1-218ENST00000509553 EEA1Q15075 1411 aa25.61■■□□□ 1.69
SH3TC1-218ENST00000509553 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
SH3TC1-218ENST00000509553 FHAD1B1AJZ9 1412 aa25.54■■□□□ 1.68
SH3TC1-218ENST00000509553 CSRNP3Q8WYN3 585 aa25.54■■□□□ 1.68
SH3TC1-218ENST00000509553 CARMIL1Q5VZK9 1371 aa25.52■■□□□ 1.68
SH3TC1-218ENST00000509553 FBLN2P98095 1184 aa25.5■■□□□ 1.67
SH3TC1-218ENST00000509553 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
SH3TC1-218ENST00000509553 PRXQ9BXM0 1461 aa25.47■■□□□ 1.67
SH3TC1-218ENST00000509553 CHMP7Q8WUX9 453 aaPredicted RBP25.47■■□□□ 1.67
SH3TC1-218ENST00000509553 KIF21BO75037 1637 aa25.44■■□□□ 1.66
SH3TC1-218ENST00000509553 RAPGEF2Q9Y4G8 1499 aa25.43■■□□□ 1.66
SH3TC1-218ENST00000509553 CEP170Q5SW79 1584 aa25.4■■□□□ 1.66
SH3TC1-218ENST00000509553 RIMBP3CA6NJZ7 1639 aa25.37■■□□□ 1.65
SH3TC1-218ENST00000509553 RIMBP3BA6NNM3 1639 aa25.37■■□□□ 1.65
SH3TC1-218ENST00000509553 RIMBP3Q9UFD9 1639 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms