RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 NISCHQ9Y2I1 1504 aa20.28■□□□□ 0.84
HTT-205ENST00000509043 CCDC180Q9P1Z9 1646 aa17.62■□□□□ 0.41
HTT-205ENST00000509043 ZCCHC6Q5VYS8 1495 aaKnown RBP17.11■□□□□ 0.33
HTT-205ENST00000509043 DCAF1Q9Y4B6 1507 aa16.89■□□□□ 0.29
HTT-205ENST00000509043 MYO15BQ96JP2 1530 aa16.61■□□□□ 0.25
HTT-205ENST00000509043 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
HTT-205ENST00000509043 DCAF8L2P0C7V8 631 aa16.5■□□□□ 0.23
HTT-205ENST00000509043 NACADO15069 1562 aa16.35■□□□□ 0.21
HTT-205ENST00000509043 ABCC9O60706 1549 aa16.25■□□□□ 0.19
HTT-205ENST00000509043 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
HTT-205ENST00000509043 SCRIBQ14160 1630 aa16.1■□□□□ 0.17
HTT-205ENST00000509043 SUPT5HO00267 1087 aaKnown RBP16.1■□□□□ 0.17
HTT-205ENST00000509043 RSF1Q96T23 1441 aaPredicted RBP15.81■□□□□ 0.12
HTT-205ENST00000509043 BAZ1AQ9NRL2 1556 aaPredicted RBP15.68■□□□□ 0.1
HTT-205ENST00000509043 UNC13AQ9UPW8 1703 aa15.67■□□□□ 0.1
HTT-205ENST00000509043 CECR2Q9BXF3 1484 aa15.64■□□□□ 0.09
HTT-205ENST00000509043 CHIC1Q5VXU3 224 aa15.62■□□□□ 0.09
HTT-205ENST00000509043 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
HTT-205ENST00000509043 BICRAQ9NZM4 1560 aa15.55■□□□□ 0.08
HTT-205ENST00000509043 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
HTT-205ENST00000509043 WIZO95785 1651 aa15.48■□□□□ 0.07
HTT-205ENST00000509043 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
HTT-205ENST00000509043 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
HTT-205ENST00000509043 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
HTT-205ENST00000509043 SMARCA2P51531 1590 aa15.26■□□□□ 0.03
HTT-205ENST00000509043 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
HTT-205ENST00000509043 AEBP2Q6ZN18 517 aaPredicted RBP15.23■□□□□ 0.03
HTT-205ENST00000509043 CCDC88BA6NC98 1476 aa15.22■□□□□ 0.03
HTT-205ENST00000509043 TRIM41Q8WV44 630 aa15.21■□□□□ 0.03
HTT-205ENST00000509043 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
HTT-205ENST00000509043 BAZ1BQ9UIG0 1483 aaKnown RBP15.14■□□□□ 0.01
HTT-205ENST00000509043 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
HTT-205ENST00000509043 NCAPD3P42695 1498 aa15.08■□□□□ 0
HTT-205ENST00000509043 EEA1Q15075 1411 aa14.94□□□□□ -0.02
HTT-205ENST00000509043 LOC105371045A0A1W2PR82 267 aa14.93□□□□□ -0.02
HTT-205ENST00000509043 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
HTT-205ENST00000509043 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
HTT-205ENST00000509043 FAM9AQ8IZU1 332 aaPredicted RBP14.81□□□□□ -0.04
HTT-205ENST00000509043 CFTRP13569 1480 aa14.8□□□□□ -0.04
HTT-205ENST00000509043 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
HTT-205ENST00000509043 TOP2BQ02880 1626 aa14.76□□□□□ -0.05
HTT-205ENST00000509043 CC2D2AQ9P2K1 1620 aa14.76□□□□□ -0.05
HTT-205ENST00000509043 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
HTT-205ENST00000509043 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
HTT-205ENST00000509043 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
HTT-205ENST00000509043 SOGA1O94964 1423 aa14.72□□□□□ -0.05
HTT-205ENST00000509043 TNIKQ9UKE5 1360 aa14.68□□□□□ -0.06
HTT-205ENST00000509043 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
HTT-205ENST00000509043 GOLGA3Q08378 1498 aa14.66□□□□□ -0.06
HTT-205ENST00000509043 KIF21BO75037 1637 aa14.66□□□□□ -0.06
HTT-205ENST00000509043 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
HTT-205ENST00000509043 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
HTT-205ENST00000509043 CUX1P39880 1505 aa14.6□□□□□ -0.07
HTT-205ENST00000509043 RUSC2Q8N2Y8 1516 aa14.6□□□□□ -0.07
HTT-205ENST00000509043 PCGF6Q9BYE7 350 aa14.58□□□□□ -0.08
HTT-205ENST00000509043 CEP162Q5TB80 1403 aa14.57□□□□□ -0.08
HTT-205ENST00000509043 ERICH3Q5RHP9 1530 aa14.54□□□□□ -0.08
HTT-205ENST00000509043 KIF27Q86VH2 1401 aa14.53□□□□□ -0.08
HTT-205ENST00000509043 LAMC3Q9Y6N6 1575 aa14.52□□□□□ -0.08
HTT-205ENST00000509043 UBTFP17480 764 aaKnown RBP14.5□□□□□ -0.09
HTT-205ENST00000509043 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
HTT-205ENST00000509043 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
HTT-205ENST00000509043 PRXQ9BXM0 1461 aa14.49□□□□□ -0.09
HTT-205ENST00000509043 HRCP23327 699 aa14.46□□□□□ -0.09
HTT-205ENST00000509043 DNMBPQ6XZF7 1577 aa14.45□□□□□ -0.1
HTT-205ENST00000509043 RAPGEF2Q9Y4G8 1499 aa14.43□□□□□ -0.1
HTT-205ENST00000509043 CLIP1P30622 1438 aa14.41□□□□□ -0.1
HTT-205ENST00000509043 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
HTT-205ENST00000509043 FGD5Q6ZNL6 1462 aa14.4□□□□□ -0.1
HTT-205ENST00000509043 CUX2O14529 1486 aa14.37□□□□□ -0.11
HTT-205ENST00000509043 TOPBP1Q92547 1522 aa14.36□□□□□ -0.11
HTT-205ENST00000509043 ABCA10Q8WWZ4 1543 aa14.35□□□□□ -0.11
HTT-205ENST00000509043 VPS8Q8N3P4 1428 aa14.34□□□□□ -0.11
HTT-205ENST00000509043 NESP48681 1621 aa14.33□□□□□ -0.11
HTT-205ENST00000509043 IGF1RP08069 1367 aa14.33□□□□□ -0.12
HTT-205ENST00000509043 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
HTT-205ENST00000509043 ZEB1P37275 1124 aaPredicted RBP14.3□□□□□ -0.12
HTT-205ENST00000509043 CARMIL1Q5VZK9 1371 aa14.27□□□□□ -0.12
HTT-205ENST00000509043 URB2Q14146 1524 aaKnown RBP14.26□□□□□ -0.13
HTT-205ENST00000509043 CUL7Q14999 1698 aa14.25□□□□□ -0.13
HTT-205ENST00000509043 WDR97A6NE52 1622 aa14.23□□□□□ -0.13
HTT-205ENST00000509043 APLP2Q06481 763 aa14.22□□□□□ -0.13
HTT-205ENST00000509043 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
HTT-205ENST00000509043 KIF21AQ7Z4S6 1674 aa14.2□□□□□ -0.14
HTT-205ENST00000509043 ARAP1Q96P48 1450 aa14.19□□□□□ -0.14
HTT-205ENST00000509043 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
HTT-205ENST00000509043 ABCA5Q8WWZ7 1642 aa14.17□□□□□ -0.14
HTT-205ENST00000509043 ARHGAP35Q9NRY4 1499 aa14.15□□□□□ -0.14
HTT-205ENST00000509043 GAPVD1Q14C86 1478 aa14.13□□□□□ -0.15
HTT-205ENST00000509043 PPARGC1BQ86YN6 1023 aaKnown RBP14.13□□□□□ -0.15
HTT-205ENST00000509043 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
HTT-205ENST00000509043 EFCAB5A4FU69 1503 aa14.13□□□□□ -0.15
HTT-205ENST00000509043 MAP3K1Q13233 1512 aa14.13□□□□□ -0.15
HTT-205ENST00000509043 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
HTT-205ENST00000509043 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
HTT-205ENST00000509043 WDR62O43379 1518 aa14.09□□□□□ -0.15
HTT-205ENST00000509043 CTTNBP2Q8WZ74 1663 aa14.07□□□□□ -0.16
HTT-205ENST00000509043 IFT140Q96RY7 1462 aa14.07□□□□□ -0.16
HTT-205ENST00000509043 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
HTT-205ENST00000509043 RANGAP1P46060 587 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms