RNA–Protein interactions for RNA: ENST00000508824.1

SLIT2-206, Transcript of slit guidance ligand 2, humanhuman

TSL 5

Gene SLIT2, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT2-206ENST00000508824 NISCHQ9Y2I1 1504 aa38.28■■■■□ 3.72
SLIT2-206ENST00000508824 CCDC180Q9P1Z9 1646 aa33.94■■■■□ 3.02
SLIT2-206ENST00000508824 ABCC9O60706 1549 aa33.26■■■□□ 2.91
SLIT2-206ENST00000508824 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
SLIT2-206ENST00000508824 RB1CC1Q8TDY2 1594 aa32.01■■■□□ 2.71
SLIT2-206ENST00000508824 NACADO15069 1562 aa31.98■■■□□ 2.71
SLIT2-206ENST00000508824 ZCCHC6Q5VYS8 1495 aaKnown RBP31.85■■■□□ 2.69
SLIT2-206ENST00000508824 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
SLIT2-206ENST00000508824 DCAF1Q9Y4B6 1507 aa31.68■■■□□ 2.66
SLIT2-206ENST00000508824 PABPN1Q86U42 306 aaKnown RBP eCLIP31.14■■■□□ 2.58
SLIT2-206ENST00000508824 UNC13AQ9UPW8 1703 aa31.1■■■□□ 2.57
SLIT2-206ENST00000508824 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
SLIT2-206ENST00000508824 BICRAQ9NZM4 1560 aa30.95■■■□□ 2.54
SLIT2-206ENST00000508824 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
SLIT2-206ENST00000508824 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.47
SLIT2-206ENST00000508824 EIF4G1Q04637 1599 aaKnown RBP30.18■■■□□ 2.42
SLIT2-206ENST00000508824 CC2D2AQ9P2K1 1620 aa30.04■■■□□ 2.4
SLIT2-206ENST00000508824 CECR2Q9BXF3 1484 aa29.89■■■□□ 2.38
SLIT2-206ENST00000508824 BAZ1AQ9NRL2 1556 aaPredicted RBP29.68■■■□□ 2.34
SLIT2-206ENST00000508824 SMARCA4P51532 1647 aa29.64■■■□□ 2.34
SLIT2-206ENST00000508824 NCAPD3P42695 1498 aa29.55■■■□□ 2.32
SLIT2-206ENST00000508824 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
SLIT2-206ENST00000508824 SMARCA2P51531 1590 aa29.51■■■□□ 2.31
SLIT2-206ENST00000508824 MROH2BQ7Z745 1585 aa29.47■■■□□ 2.31
SLIT2-206ENST00000508824 PEG3Q9GZU2 1588 aa29.36■■■□□ 2.29
SLIT2-206ENST00000508824 HMGXB3Q12766 1538 aa29.34■■■□□ 2.29
SLIT2-206ENST00000508824 BAZ1BQ9UIG0 1483 aaKnown RBP29.31■■■□□ 2.28
SLIT2-206ENST00000508824 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.26
SLIT2-206ENST00000508824 WIZO95785 1651 aa29.12■■■□□ 2.25
SLIT2-206ENST00000508824 TOP2AP11388 1531 aaKnown RBP28.85■■■□□ 2.21
SLIT2-206ENST00000508824 NESP48681 1621 aa28.75■■■□□ 2.19
SLIT2-206ENST00000508824 LAMC3Q9Y6N6 1575 aa28.72■■■□□ 2.19
SLIT2-206ENST00000508824 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
SLIT2-206ENST00000508824 ERCC6Q03468 1493 aa28.72■■■□□ 2.19
SLIT2-206ENST00000508824 PDS5BQ9NTI5 1447 aa28.61■■■□□ 2.17
SLIT2-206ENST00000508824 SUPT5HO00267 1087 aaKnown RBP28.58■■■□□ 2.17
SLIT2-206ENST00000508824 CCDC88BA6NC98 1476 aa28.55■■■□□ 2.16
SLIT2-206ENST00000508824 CFTRP13569 1480 aa28.5■■■□□ 2.15
SLIT2-206ENST00000508824 CUX2O14529 1486 aa28.38■■■□□ 2.13
SLIT2-206ENST00000508824 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
SLIT2-206ENST00000508824 KIF21AQ7Z4S6 1674 aa28.33■■■□□ 2.13
SLIT2-206ENST00000508824 CEP164Q9UPV0 1460 aa28.3■■■□□ 2.12
SLIT2-206ENST00000508824 THOC2Q8NI27 1593 aaKnown RBP28.25■■■□□ 2.11
SLIT2-206ENST00000508824 MRC2Q9UBG0 1479 aa28.25■■■□□ 2.11
SLIT2-206ENST00000508824 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
SLIT2-206ENST00000508824 WDR62O43379 1518 aa28.1■■■□□ 2.09
SLIT2-206ENST00000508824 URB2Q14146 1524 aaKnown RBP28■■■□□ 2.07
SLIT2-206ENST00000508824 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
SLIT2-206ENST00000508824 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
SLIT2-206ENST00000508824 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
SLIT2-206ENST00000508824 IFT140Q96RY7 1462 aa27.73■■■□□ 2.03
SLIT2-206ENST00000508824 CUX1P39880 1505 aa27.63■■■□□ 2.01
SLIT2-206ENST00000508824 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
SLIT2-206ENST00000508824 SOGA1O94964 1423 aa27.6■■■□□ 2.01
SLIT2-206ENST00000508824 FGD5Q6ZNL6 1462 aa27.57■■■□□ 2
SLIT2-206ENST00000508824 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
SLIT2-206ENST00000508824 DNAJC5Q9H3Z4 198 aa27.54■■■□□ 2
SLIT2-206ENST00000508824 ZNF608Q9ULD9 1512 aaPredicted RBP27.53■■■□□ 2
SLIT2-206ENST00000508824 RAD54L2Q9Y4B4 1467 aa27.51■■■□□ 2
SLIT2-206ENST00000508824 TARBP1Q13395 1621 aaKnown RBP27.5■■□□□ 1.99
SLIT2-206ENST00000508824 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
SLIT2-206ENST00000508824 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
SLIT2-206ENST00000508824 TOP2BQ02880 1626 aa27.41■■□□□ 1.98
SLIT2-206ENST00000508824 EIF4G3O43432 1585 aaKnown RBP27.39■■□□□ 1.97
SLIT2-206ENST00000508824 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
SLIT2-206ENST00000508824 SYNJ1O43426 1573 aa27.37■■□□□ 1.97
SLIT2-206ENST00000508824 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
SLIT2-206ENST00000508824 OSCARQ8IYS5 282 aa27.33■■□□□ 1.97
SLIT2-206ENST00000508824 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
SLIT2-206ENST00000508824 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
SLIT2-206ENST00000508824 GAPVD1Q14C86 1478 aa27.25■■□□□ 1.95
SLIT2-206ENST00000508824 FBLN2P98095 1184 aa27.21■■□□□ 1.95
SLIT2-206ENST00000508824 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
SLIT2-206ENST00000508824 MAGI1Q96QZ7 1491 aaPredicted RBP27.15■■□□□ 1.94
SLIT2-206ENST00000508824 CHMP7Q8WUX9 453 aaPredicted RBP27.15■■□□□ 1.94
SLIT2-206ENST00000508824 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
SLIT2-206ENST00000508824 SYNJ2O15056 1496 aa27.05■■□□□ 1.92
SLIT2-206ENST00000508824 PBRM1Q86U86 1689 aa27.05■■□□□ 1.92
SLIT2-206ENST00000508824 TRIM41Q8WV44 630 aa27.03■■□□□ 1.92
SLIT2-206ENST00000508824 KIF27Q86VH2 1401 aa27■■□□□ 1.91
SLIT2-206ENST00000508824 ERICH3Q5RHP9 1530 aa27■■□□□ 1.91
SLIT2-206ENST00000508824 CHD1O14646 1710 aa26.99■■□□□ 1.91
SLIT2-206ENST00000508824 FHAD1B1AJZ9 1412 aa26.95■■□□□ 1.9
SLIT2-206ENST00000508824 IGF1RP08069 1367 aa26.88■■□□□ 1.89
SLIT2-206ENST00000508824 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
SLIT2-206ENST00000508824 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
SLIT2-206ENST00000508824 CLASP1Q7Z460 1538 aa26.76■■□□□ 1.87
SLIT2-206ENST00000508824 CARMIL1Q5VZK9 1371 aa26.74■■□□□ 1.87
SLIT2-206ENST00000508824 NUP160Q12769 1436 aa26.73■■□□□ 1.87
SLIT2-206ENST00000508824 ARHGEF11O15085 1522 aa26.72■■□□□ 1.87
SLIT2-206ENST00000508824 CUL7Q14999 1698 aa26.72■■□□□ 1.87
SLIT2-206ENST00000508824 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
SLIT2-206ENST00000508824 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
SLIT2-206ENST00000508824 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
SLIT2-206ENST00000508824 RUSC2Q8N2Y8 1516 aa26.68■■□□□ 1.86
SLIT2-206ENST00000508824 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
SLIT2-206ENST00000508824 CEP170Q5SW79 1584 aa26.66■■□□□ 1.86
SLIT2-206ENST00000508824 CYB5RLQ6IPT4 315 aa26.6■■□□□ 1.85
SLIT2-206ENST00000508824 JPH4Q96JJ6 628 aa26.58■■□□□ 1.85
SLIT2-206ENST00000508824 RAPGEF2Q9Y4G8 1499 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms