RNA–Protein interactions for RNA: ENST00000508805.5

SPOP-213, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 3

Gene SPOP, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-213ENST00000508805 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
SPOP-213ENST00000508805 ABCC9O60706 1549 aa31.14■■■□□ 2.58
SPOP-213ENST00000508805 CCDC180Q9P1Z9 1646 aa30.39■■■□□ 2.46
SPOP-213ENST00000508805 DNAJC5BQ9UF47 199 aa29.9■■■□□ 2.38
SPOP-213ENST00000508805 RB1CC1Q8TDY2 1594 aa29.3■■■□□ 2.28
SPOP-213ENST00000508805 NACADO15069 1562 aa28.95■■■□□ 2.22
SPOP-213ENST00000508805 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
SPOP-213ENST00000508805 DCAF8L2P0C7V8 631 aa28.66■■■□□ 2.18
SPOP-213ENST00000508805 UNC13AQ9UPW8 1703 aa28.54■■■□□ 2.16
SPOP-213ENST00000508805 BICRAQ9NZM4 1560 aa28.5■■■□□ 2.15
SPOP-213ENST00000508805 MYO15BQ96JP2 1530 aa28.35■■■□□ 2.13
SPOP-213ENST00000508805 CECR2Q9BXF3 1484 aa28.14■■■□□ 2.09
SPOP-213ENST00000508805 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
SPOP-213ENST00000508805 CC2D2AQ9P2K1 1620 aa28.07■■■□□ 2.08
SPOP-213ENST00000508805 DNAJC5Q9H3Z4 198 aa27.98■■■□□ 2.07
SPOP-213ENST00000508805 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
SPOP-213ENST00000508805 DCAF1Q9Y4B6 1507 aa27.72■■■□□ 2.03
SPOP-213ENST00000508805 ZCCHC6Q5VYS8 1495 aaKnown RBP27.69■■■□□ 2.02
SPOP-213ENST00000508805 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
SPOP-213ENST00000508805 CUX2O14529 1486 aa27.14■■□□□ 1.94
SPOP-213ENST00000508805 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
SPOP-213ENST00000508805 NCAPD3P42695 1498 aa26.78■■□□□ 1.88
SPOP-213ENST00000508805 ATAD2BQ9ULI0 1458 aa26.58■■□□□ 1.85
SPOP-213ENST00000508805 NESP48681 1621 aa26.55■■□□□ 1.84
SPOP-213ENST00000508805 HMGXB3Q12766 1538 aa26.47■■□□□ 1.83
SPOP-213ENST00000508805 SMARCA2P51531 1590 aa26.44■■□□□ 1.82
SPOP-213ENST00000508805 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
SPOP-213ENST00000508805 THOC2Q8NI27 1593 aaKnown RBP26.39■■□□□ 1.82
SPOP-213ENST00000508805 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
SPOP-213ENST00000508805 BAZ1BQ9UIG0 1483 aaKnown RBP26.26■■□□□ 1.79
SPOP-213ENST00000508805 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
SPOP-213ENST00000508805 PDS5BQ9NTI5 1447 aa26.14■■□□□ 1.78
SPOP-213ENST00000508805 BAZ1AQ9NRL2 1556 aaPredicted RBP26.11■■□□□ 1.77
SPOP-213ENST00000508805 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
SPOP-213ENST00000508805 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
SPOP-213ENST00000508805 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
SPOP-213ENST00000508805 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
SPOP-213ENST00000508805 WDR62O43379 1518 aa25.9■■□□□ 1.74
SPOP-213ENST00000508805 MROH2BQ7Z745 1585 aa25.88■■□□□ 1.73
SPOP-213ENST00000508805 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
SPOP-213ENST00000508805 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
SPOP-213ENST00000508805 FANCD2Q9BXW9 1451 aa25.61■■□□□ 1.69
SPOP-213ENST00000508805 WIZO95785 1651 aa25.48■■□□□ 1.67
SPOP-213ENST00000508805 RIMBP3CA6NJZ7 1639 aa25.48■■□□□ 1.67
SPOP-213ENST00000508805 RIMBP3BA6NNM3 1639 aa25.48■■□□□ 1.67
SPOP-213ENST00000508805 RIMBP3Q9UFD9 1639 aa25.48■■□□□ 1.67
SPOP-213ENST00000508805 CFTRP13569 1480 aa25.47■■□□□ 1.67
SPOP-213ENST00000508805 URB2Q14146 1524 aaKnown RBP25.44■■□□□ 1.66
SPOP-213ENST00000508805 ARHGEF11O15085 1522 aa25.37■■□□□ 1.65
SPOP-213ENST00000508805 ZNF608Q9ULD9 1512 aaPredicted RBP25.25■■□□□ 1.63
SPOP-213ENST00000508805 CYB5RLQ6IPT4 315 aa25.24■■□□□ 1.63
SPOP-213ENST00000508805 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
SPOP-213ENST00000508805 TRHP20396 242 aaPredicted RBP25.18■■□□□ 1.62
SPOP-213ENST00000508805 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
SPOP-213ENST00000508805 RSF1Q96T23 1441 aaPredicted RBP25.11■■□□□ 1.61
SPOP-213ENST00000508805 ARAP1Q96P48 1450 aa25.08■■□□□ 1.6
SPOP-213ENST00000508805 TOPBP1Q92547 1522 aa25.04■■□□□ 1.6
SPOP-213ENST00000508805 EIF4G3O43432 1585 aaKnown RBP25.03■■□□□ 1.6
SPOP-213ENST00000508805 PRDM2Q13029 1718 aa25■■□□□ 1.59
SPOP-213ENST00000508805 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
SPOP-213ENST00000508805 ABCC8Q09428 1581 aa24.94■■□□□ 1.58
SPOP-213ENST00000508805 AQRO60306 1485 aaKnown RBP eCLIP24.94■■□□□ 1.582e-7■■■■□ 26.5
SPOP-213ENST00000508805 CHD1O14646 1710 aa24.92■■□□□ 1.58
SPOP-213ENST00000508805 FBLN2P98095 1184 aa24.91■■□□□ 1.58
SPOP-213ENST00000508805 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.57
SPOP-213ENST00000508805 DNMBPQ6XZF7 1577 aa24.87■■□□□ 1.57
SPOP-213ENST00000508805 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
SPOP-213ENST00000508805 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
SPOP-213ENST00000508805 CLASP1Q7Z460 1538 aa24.71■■□□□ 1.55
SPOP-213ENST00000508805 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
SPOP-213ENST00000508805 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
SPOP-213ENST00000508805 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.54
SPOP-213ENST00000508805 SOGA1O94964 1423 aa24.63■■□□□ 1.53
SPOP-213ENST00000508805 CHMP7Q8WUX9 453 aaPredicted RBP24.62■■□□□ 1.53
SPOP-213ENST00000508805 SYNJ1O43426 1573 aa24.6■■□□□ 1.53
SPOP-213ENST00000508805 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
SPOP-213ENST00000508805 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
SPOP-213ENST00000508805 GAPVD1Q14C86 1478 aa24.51■■□□□ 1.51
SPOP-213ENST00000508805 SYNJ2O15056 1496 aa24.5■■□□□ 1.51
SPOP-213ENST00000508805 GRIN2BQ13224 1484 aa24.5■■□□□ 1.51
SPOP-213ENST00000508805 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
SPOP-213ENST00000508805 CUX1P39880 1505 aa24.35■■□□□ 1.49
SPOP-213ENST00000508805 ERCC6L2Q5T890 1561 aa24.27■■□□□ 1.48
SPOP-213ENST00000508805 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
SPOP-213ENST00000508805 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
SPOP-213ENST00000508805 GRIN2AQ12879 1464 aa24.17■■□□□ 1.46
SPOP-213ENST00000508805 ABCA5Q8WWZ7 1642 aa24.17■■□□□ 1.46
SPOP-213ENST00000508805 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
SPOP-213ENST00000508805 NUP160Q12769 1436 aa24.14■■□□□ 1.45
SPOP-213ENST00000508805 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
SPOP-213ENST00000508805 SHROOM2Q13796 1616 aa24.06■■□□□ 1.44
SPOP-213ENST00000508805 ADAMTS12P58397 1594 aa24.04■■□□□ 1.44
SPOP-213ENST00000508805 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
SPOP-213ENST00000508805 KDM4FA0A1W2PPD8 638 aa23.98■■□□□ 1.43
SPOP-213ENST00000508805 FAM69CQ0P6D2 419 aa23.98■■□□□ 1.43
SPOP-213ENST00000508805 ILDR1Q86SU0 546 aaPredicted RBP23.97■■□□□ 1.43
SPOP-213ENST00000508805 ABCC10Q5T3U5 1492 aa23.96■■□□□ 1.43
SPOP-213ENST00000508805 PRG4Q92954 1404 aaPredicted RBP23.96■■□□□ 1.43
SPOP-213ENST00000508805 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
SPOP-213ENST00000508805 JPH4Q96JJ6 628 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms