RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 NISCHQ9Y2I1 1504 aa35.42■■■■□ 3.26
SH3TC1-216ENST00000508641 CCDC180Q9P1Z9 1646 aa31.41■■■□□ 2.62
SH3TC1-216ENST00000508641 ABCC9O60706 1549 aa30.83■■■□□ 2.53
SH3TC1-216ENST00000508641 DCAF8L2P0C7V8 631 aa29.77■■■□□ 2.36
SH3TC1-216ENST00000508641 RB1CC1Q8TDY2 1594 aa29.6■■■□□ 2.33
SH3TC1-216ENST00000508641 NACADO15069 1562 aa29.55■■■□□ 2.32
SH3TC1-216ENST00000508641 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
SH3TC1-216ENST00000508641 MYO15BQ96JP2 1530 aa29.33■■■□□ 2.29
SH3TC1-216ENST00000508641 DCAF1Q9Y4B6 1507 aa29.24■■■□□ 2.27
SH3TC1-216ENST00000508641 UNC13AQ9UPW8 1703 aa28.93■■■□□ 2.22
SH3TC1-216ENST00000508641 PABPN1Q86U42 306 aaKnown RBP eCLIP28.87■■■□□ 2.21
SH3TC1-216ENST00000508641 SCRIBQ14160 1630 aa28.76■■■□□ 2.2
SH3TC1-216ENST00000508641 BICRAQ9NZM4 1560 aa28.7■■■□□ 2.18
SH3TC1-216ENST00000508641 SHROOM4Q9ULL8 1493 aa28.31■■■□□ 2.12
SH3TC1-216ENST00000508641 DNAJC5BQ9UF47 199 aa28.29■■■□□ 2.12
SH3TC1-216ENST00000508641 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
SH3TC1-216ENST00000508641 CC2D2AQ9P2K1 1620 aa27.84■■■□□ 2.05
SH3TC1-216ENST00000508641 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
SH3TC1-216ENST00000508641 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
SH3TC1-216ENST00000508641 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
SH3TC1-216ENST00000508641 MROH2BQ7Z745 1585 aa27.33■■□□□ 1.97
SH3TC1-216ENST00000508641 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
SH3TC1-216ENST00000508641 NCAPD3P42695 1498 aa27.28■■□□□ 1.96
SH3TC1-216ENST00000508641 SMARCA2P51531 1590 aa27.27■■□□□ 1.96
SH3TC1-216ENST00000508641 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
SH3TC1-216ENST00000508641 BAZ1BQ9UIG0 1483 aaKnown RBP27.12■■□□□ 1.93
SH3TC1-216ENST00000508641 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
SH3TC1-216ENST00000508641 WIZO95785 1651 aa27.05■■□□□ 1.92
SH3TC1-216ENST00000508641 RSF1Q96T23 1441 aaPredicted RBP27.03■■□□□ 1.92
SH3TC1-216ENST00000508641 TOP2AP11388 1531 aaKnown RBP26.71■■□□□ 1.87
SH3TC1-216ENST00000508641 NESP48681 1621 aa26.68■■□□□ 1.86
SH3TC1-216ENST00000508641 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
SH3TC1-216ENST00000508641 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
SH3TC1-216ENST00000508641 SUPT5HO00267 1087 aaKnown RBP26.52■■□□□ 1.84
SH3TC1-216ENST00000508641 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
SH3TC1-216ENST00000508641 CCDC88BA6NC98 1476 aa26.46■■□□□ 1.83
SH3TC1-216ENST00000508641 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
SH3TC1-216ENST00000508641 CFTRP13569 1480 aa26.35■■□□□ 1.81
SH3TC1-216ENST00000508641 KIF21AQ7Z4S6 1674 aa26.33■■□□□ 1.81
SH3TC1-216ENST00000508641 FANCD2Q9BXW9 1451 aa26.22■■□□□ 1.79
SH3TC1-216ENST00000508641 CUX2O14529 1486 aa26.21■■□□□ 1.79
SH3TC1-216ENST00000508641 THOC2Q8NI27 1593 aaKnown RBP26.19■■□□□ 1.78
SH3TC1-216ENST00000508641 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
SH3TC1-216ENST00000508641 MRC2Q9UBG0 1479 aa26.11■■□□□ 1.77
SH3TC1-216ENST00000508641 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
SH3TC1-216ENST00000508641 WDR62O43379 1518 aa26■■□□□ 1.75
SH3TC1-216ENST00000508641 URB2Q14146 1524 aaKnown RBP25.95■■□□□ 1.74
SH3TC1-216ENST00000508641 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
SH3TC1-216ENST00000508641 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
SH3TC1-216ENST00000508641 DNMBPQ6XZF7 1577 aa25.75■■□□□ 1.71
SH3TC1-216ENST00000508641 CUX1P39880 1505 aa25.63■■□□□ 1.69
SH3TC1-216ENST00000508641 IFT140Q96RY7 1462 aa25.61■■□□□ 1.69
SH3TC1-216ENST00000508641 POLA1P09884 1462 aaPredicted RBP25.58■■□□□ 1.69
SH3TC1-216ENST00000508641 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
SH3TC1-216ENST00000508641 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
SH3TC1-216ENST00000508641 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
SH3TC1-216ENST00000508641 SOGA1O94964 1423 aa25.52■■□□□ 1.68
SH3TC1-216ENST00000508641 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
SH3TC1-216ENST00000508641 TARBP1Q13395 1621 aaKnown RBP25.49■■□□□ 1.67
SH3TC1-216ENST00000508641 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
SH3TC1-216ENST00000508641 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.663e-8■■■■□ 20.9
SH3TC1-216ENST00000508641 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
SH3TC1-216ENST00000508641 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
SH3TC1-216ENST00000508641 EIF4G3O43432 1585 aaKnown RBP25.39■■□□□ 1.66
SH3TC1-216ENST00000508641 TOP2BQ02880 1626 aa25.39■■□□□ 1.66
SH3TC1-216ENST00000508641 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
SH3TC1-216ENST00000508641 ABCA10Q8WWZ4 1543 aa25.27■■□□□ 1.64
SH3TC1-216ENST00000508641 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
SH3TC1-216ENST00000508641 OSCARQ8IYS5 282 aa25.2■■□□□ 1.62
SH3TC1-216ENST00000508641 GAPVD1Q14C86 1478 aa25.2■■□□□ 1.62
SH3TC1-216ENST00000508641 FBLN2P98095 1184 aa25.18■■□□□ 1.62
SH3TC1-216ENST00000508641 GRIN2BQ13224 1484 aa25.17■■□□□ 1.62
SH3TC1-216ENST00000508641 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
SH3TC1-216ENST00000508641 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
SH3TC1-216ENST00000508641 PBRM1Q86U86 1689 aa25.12■■□□□ 1.61
SH3TC1-216ENST00000508641 CHD1O14646 1710 aa25.09■■□□□ 1.61
SH3TC1-216ENST00000508641 MAGI1Q96QZ7 1491 aaPredicted RBP25.08■■□□□ 1.6
SH3TC1-216ENST00000508641 CHMP7Q8WUX9 453 aaPredicted RBP25.07■■□□□ 1.6
SH3TC1-216ENST00000508641 TRIM41Q8WV44 630 aa25.01■■□□□ 1.59
SH3TC1-216ENST00000508641 SYNJ2O15056 1496 aa25■■□□□ 1.59
SH3TC1-216ENST00000508641 KIF27Q86VH2 1401 aa24.95■■□□□ 1.59
SH3TC1-216ENST00000508641 ERICH3Q5RHP9 1530 aa24.95■■□□□ 1.58
SH3TC1-216ENST00000508641 ADAMTS12P58397 1594 aa24.91■■□□□ 1.58
SH3TC1-216ENST00000508641 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
SH3TC1-216ENST00000508641 IGF1RP08069 1367 aa24.87■■□□□ 1.57
SH3TC1-216ENST00000508641 GRIN2AQ12879 1464 aa24.85■■□□□ 1.57
SH3TC1-216ENST00000508641 RUSC2Q8N2Y8 1516 aa24.79■■□□□ 1.56
SH3TC1-216ENST00000508641 CLASP1Q7Z460 1538 aa24.77■■□□□ 1.56
SH3TC1-216ENST00000508641 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
SH3TC1-216ENST00000508641 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
SH3TC1-216ENST00000508641 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
SH3TC1-216ENST00000508641 ARHGEF11O15085 1522 aa24.73■■□□□ 1.55
SH3TC1-216ENST00000508641 CUL7Q14999 1698 aa24.72■■□□□ 1.55
SH3TC1-216ENST00000508641 CEP170Q5SW79 1584 aa24.72■■□□□ 1.55
SH3TC1-216ENST00000508641 CARMIL1Q5VZK9 1371 aa24.72■■□□□ 1.55
SH3TC1-216ENST00000508641 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
SH3TC1-216ENST00000508641 NUP160Q12769 1436 aa24.71■■□□□ 1.55
SH3TC1-216ENST00000508641 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
SH3TC1-216ENST00000508641 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
SH3TC1-216ENST00000508641 FAM9AQ8IZU1 332 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms