RNA–Protein interactions for RNA: ENST00000508588.5

PKD2-205, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

TSL 2 BASIC

Gene PKD2, Length 1,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-205ENST00000508588 NISCHQ9Y2I1 1504 aa28.08■■■□□ 2.09
PKD2-205ENST00000508588 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
PKD2-205ENST00000508588 ABCC9O60706 1549 aa24.36■■□□□ 1.49
PKD2-205ENST00000508588 NACADO15069 1562 aa23.46■■□□□ 1.35
PKD2-205ENST00000508588 RB1CC1Q8TDY2 1594 aa23.46■■□□□ 1.35
PKD2-205ENST00000508588 DCAF8L2P0C7V8 631 aa23.45■■□□□ 1.34
PKD2-205ENST00000508588 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
PKD2-205ENST00000508588 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
PKD2-205ENST00000508588 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
PKD2-205ENST00000508588 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
PKD2-205ENST00000508588 PABPN1Q86U42 306 aaKnown RBP eCLIP22.79■■□□□ 1.24
PKD2-205ENST00000508588 BICRAQ9NZM4 1560 aa22.72■■□□□ 1.23
PKD2-205ENST00000508588 SCRIBQ14160 1630 aa22.7■■□□□ 1.23
PKD2-205ENST00000508588 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
PKD2-205ENST00000508588 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
PKD2-205ENST00000508588 EIF4G1Q04637 1599 aaKnown RBP22.13■■□□□ 1.13
PKD2-205ENST00000508588 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
PKD2-205ENST00000508588 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
PKD2-205ENST00000508588 BAZ1AQ9NRL2 1556 aaPredicted RBP21.76■■□□□ 1.07
PKD2-205ENST00000508588 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
PKD2-205ENST00000508588 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
PKD2-205ENST00000508588 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
PKD2-205ENST00000508588 SMARCA2P51531 1590 aa21.64■■□□□ 1.05
PKD2-205ENST00000508588 MROH2BQ7Z745 1585 aa21.62■■□□□ 1.05
PKD2-205ENST00000508588 PEG3Q9GZU2 1588 aa21.57■■□□□ 1.04
PKD2-205ENST00000508588 HMGXB3Q12766 1538 aa21.54■■□□□ 1.04
PKD2-205ENST00000508588 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
PKD2-205ENST00000508588 RSF1Q96T23 1441 aaPredicted RBP21.41■■□□□ 1.02
PKD2-205ENST00000508588 WIZO95785 1651 aa21.35■■□□□ 1.01
PKD2-205ENST00000508588 TOP2AP11388 1531 aaKnown RBP21.17■□□□□ 0.98
PKD2-205ENST00000508588 NESP48681 1621 aa21.07■□□□□ 0.96
PKD2-205ENST00000508588 LAMC3Q9Y6N6 1575 aa21.06■□□□□ 0.96
PKD2-205ENST00000508588 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
PKD2-205ENST00000508588 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
PKD2-205ENST00000508588 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
PKD2-205ENST00000508588 CCDC88BA6NC98 1476 aa20.93■□□□□ 0.94
PKD2-205ENST00000508588 CFTRP13569 1480 aa20.91■□□□□ 0.94
PKD2-205ENST00000508588 SUPT5HO00267 1087 aaKnown RBP20.88■□□□□ 0.93
PKD2-205ENST00000508588 CUX2O14529 1486 aa20.8■□□□□ 0.92
PKD2-205ENST00000508588 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
PKD2-205ENST00000508588 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
PKD2-205ENST00000508588 CEP164Q9UPV0 1460 aa20.74■□□□□ 0.91
PKD2-205ENST00000508588 THOC2Q8NI27 1593 aaKnown RBP20.74■□□□□ 0.91
PKD2-205ENST00000508588 MRC2Q9UBG0 1479 aa20.71■□□□□ 0.91
PKD2-205ENST00000508588 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
PKD2-205ENST00000508588 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
PKD2-205ENST00000508588 PRDM2Q13029 1718 aa20.64■□□□□ 0.89
PKD2-205ENST00000508588 WDR62O43379 1518 aa20.63■□□□□ 0.89
PKD2-205ENST00000508588 URB2Q14146 1524 aaKnown RBP20.54■□□□□ 0.88
PKD2-205ENST00000508588 ABCC8Q09428 1581 aa20.48■□□□□ 0.87
PKD2-205ENST00000508588 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
PKD2-205ENST00000508588 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
PKD2-205ENST00000508588 IFT140Q96RY7 1462 aa20.32■□□□□ 0.84
PKD2-205ENST00000508588 CUX1P39880 1505 aa20.28■□□□□ 0.84
PKD2-205ENST00000508588 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
PKD2-205ENST00000508588 SOGA1O94964 1423 aa20.21■□□□□ 0.83
PKD2-205ENST00000508588 FGD5Q6ZNL6 1462 aa20.21■□□□□ 0.83
PKD2-205ENST00000508588 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
PKD2-205ENST00000508588 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
PKD2-205ENST00000508588 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
PKD2-205ENST00000508588 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
PKD2-205ENST00000508588 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
PKD2-205ENST00000508588 TOP2BQ02880 1626 aa20.11■□□□□ 0.81
PKD2-205ENST00000508588 AQRO60306 1485 aaKnown RBP eCLIP20.09■□□□□ 0.81
PKD2-205ENST00000508588 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
PKD2-205ENST00000508588 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
PKD2-205ENST00000508588 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
PKD2-205ENST00000508588 EIF4G3O43432 1585 aaKnown RBP20.08■□□□□ 0.81
PKD2-205ENST00000508588 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
PKD2-205ENST00000508588 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
PKD2-205ENST00000508588 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
PKD2-205ENST00000508588 GRIN2BQ13224 1484 aa19.97■□□□□ 0.79
PKD2-205ENST00000508588 GAPVD1Q14C86 1478 aa19.96■□□□□ 0.79
PKD2-205ENST00000508588 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
PKD2-205ENST00000508588 MAGI1Q96QZ7 1491 aaPredicted RBP19.9■□□□□ 0.78
PKD2-205ENST00000508588 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
PKD2-205ENST00000508588 FBLN2P98095 1184 aa19.86■□□□□ 0.77
PKD2-205ENST00000508588 CHMP7Q8WUX9 453 aaPredicted RBP19.85■□□□□ 0.77
PKD2-205ENST00000508588 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
PKD2-205ENST00000508588 SYNJ2O15056 1496 aa19.83■□□□□ 0.76
PKD2-205ENST00000508588 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
PKD2-205ENST00000508588 CHD1O14646 1710 aa19.79■□□□□ 0.76
PKD2-205ENST00000508588 KIF27Q86VH2 1401 aa19.78■□□□□ 0.76
PKD2-205ENST00000508588 TRIM41Q8WV44 630 aa19.76■□□□□ 0.75
PKD2-205ENST00000508588 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
PKD2-205ENST00000508588 ADAMTS12P58397 1594 aa19.72■□□□□ 0.75
PKD2-205ENST00000508588 IGF1RP08069 1367 aa19.7■□□□□ 0.74
PKD2-205ENST00000508588 GRIN2AQ12879 1464 aa19.68■□□□□ 0.74
PKD2-205ENST00000508588 CLASP1Q7Z460 1538 aa19.64■□□□□ 0.73
PKD2-205ENST00000508588 NUP160Q12769 1436 aa19.62■□□□□ 0.73
PKD2-205ENST00000508588 CUL7Q14999 1698 aa19.59■□□□□ 0.73
PKD2-205ENST00000508588 ARHGEF11O15085 1522 aa19.59■□□□□ 0.73
PKD2-205ENST00000508588 CARMIL1Q5VZK9 1371 aa19.59■□□□□ 0.73
PKD2-205ENST00000508588 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
PKD2-205ENST00000508588 RIMBP3CA6NJZ7 1639 aa19.56■□□□□ 0.72
PKD2-205ENST00000508588 RIMBP3BA6NNM3 1639 aa19.56■□□□□ 0.72
PKD2-205ENST00000508588 RIMBP3Q9UFD9 1639 aa19.56■□□□□ 0.72
PKD2-205ENST00000508588 CEP170Q5SW79 1584 aa19.55■□□□□ 0.72
PKD2-205ENST00000508588 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
PKD2-205ENST00000508588 KIAA0586Q9BVV6 1533 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms