RNA–Protein interactions for RNA: ENST00000508061.6

PRDM8-206, Transcript of PR/SET domain 8, humanhuman

TSL 5

Gene PRDM8, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-206ENST00000508061 NISCHQ9Y2I1 1504 aa31.23■■■□□ 2.59
PRDM8-206ENST00000508061 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
PRDM8-206ENST00000508061 ABCC9O60706 1549 aa26.91■■□□□ 1.9
PRDM8-206ENST00000508061 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
PRDM8-206ENST00000508061 NACADO15069 1562 aa26.03■■□□□ 1.76
PRDM8-206ENST00000508061 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
PRDM8-206ENST00000508061 MYO15BQ96JP2 1530 aa25.97■■□□□ 1.75
PRDM8-206ENST00000508061 DCAF8L2P0C7V8 631 aa25.92■■□□□ 1.74
PRDM8-206ENST00000508061 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
PRDM8-206ENST00000508061 UNC13AQ9UPW8 1703 aa25.42■■□□□ 1.66
PRDM8-206ENST00000508061 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
PRDM8-206ENST00000508061 SCRIBQ14160 1630 aa25.22■■□□□ 1.63
PRDM8-206ENST00000508061 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
PRDM8-206ENST00000508061 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
PRDM8-206ENST00000508061 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
PRDM8-206ENST00000508061 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
PRDM8-206ENST00000508061 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
PRDM8-206ENST00000508061 CECR2Q9BXF3 1484 aa24.29■■□□□ 1.48
PRDM8-206ENST00000508061 SMARCA4P51532 1647 aa24.19■■□□□ 1.46
PRDM8-206ENST00000508061 BAZ1AQ9NRL2 1556 aaPredicted RBP24.18■■□□□ 1.46
PRDM8-206ENST00000508061 MROH2BQ7Z745 1585 aa24.04■■□□□ 1.44
PRDM8-206ENST00000508061 ATAD2BQ9ULI0 1458 aa24.03■■□□□ 1.44
PRDM8-206ENST00000508061 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
PRDM8-206ENST00000508061 SMARCA2P51531 1590 aa24.01■■□□□ 1.43
PRDM8-206ENST00000508061 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
PRDM8-206ENST00000508061 HMGXB3Q12766 1538 aa23.9■■□□□ 1.42
PRDM8-206ENST00000508061 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
PRDM8-206ENST00000508061 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
PRDM8-206ENST00000508061 WIZO95785 1651 aa23.79■■□□□ 1.4
PRDM8-206ENST00000508061 AEBP2Q6ZN18 517 aaPredicted RBP23.74■■□□□ 1.39
PRDM8-206ENST00000508061 TOP2AP11388 1531 aaKnown RBP23.56■■□□□ 1.36
PRDM8-206ENST00000508061 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
PRDM8-206ENST00000508061 NESP48681 1621 aa23.34■■□□□ 1.33
PRDM8-206ENST00000508061 CADPSQ9ULU8 1353 aa23.3■■□□□ 1.32
PRDM8-206ENST00000508061 CCDC88BA6NC98 1476 aa23.28■■□□□ 1.32
PRDM8-206ENST00000508061 SUPT5HO00267 1087 aaKnown RBP23.25■■□□□ 1.31
PRDM8-206ENST00000508061 CFTRP13569 1480 aa23.21■■□□□ 1.31
PRDM8-206ENST00000508061 ERCC6Q03468 1493 aa23.17■■□□□ 1.3
PRDM8-206ENST00000508061 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
PRDM8-206ENST00000508061 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
PRDM8-206ENST00000508061 PRDM2Q13029 1718 aa23.05■■□□□ 1.28
PRDM8-206ENST00000508061 FANCD2Q9BXW9 1451 aa23.02■■□□□ 1.28
PRDM8-206ENST00000508061 THOC2Q8NI27 1593 aaKnown RBP22.98■■□□□ 1.27
PRDM8-206ENST00000508061 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
PRDM8-206ENST00000508061 CUX2O14529 1486 aa22.94■■□□□ 1.26
PRDM8-206ENST00000508061 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
PRDM8-206ENST00000508061 WDR62O43379 1518 aa22.86■■□□□ 1.25
PRDM8-206ENST00000508061 URB2Q14146 1524 aaKnown RBP22.79■■□□□ 1.24
PRDM8-206ENST00000508061 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
PRDM8-206ENST00000508061 TOPBP1Q92547 1522 aa22.67■■□□□ 1.22
PRDM8-206ENST00000508061 DNMBPQ6XZF7 1577 aa22.66■■□□□ 1.22
PRDM8-206ENST00000508061 CUX1P39880 1505 aa22.55■■□□□ 1.2
PRDM8-206ENST00000508061 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
PRDM8-206ENST00000508061 POLA1P09884 1462 aaPredicted RBP22.49■■□□□ 1.19
PRDM8-206ENST00000508061 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
PRDM8-206ENST00000508061 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
PRDM8-206ENST00000508061 TARBP1Q13395 1621 aaKnown RBP22.43■■□□□ 1.18
PRDM8-206ENST00000508061 TOP2BQ02880 1626 aa22.41■■□□□ 1.18
PRDM8-206ENST00000508061 BIVM-ERCC5R4GMW8 1640 aa22.41■■□□□ 1.18
PRDM8-206ENST00000508061 SOGA1O94964 1423 aa22.4■■□□□ 1.18
PRDM8-206ENST00000508061 SYNJ1O43426 1573 aa22.38■■□□□ 1.17
PRDM8-206ENST00000508061 RAD54L2Q9Y4B4 1467 aa22.37■■□□□ 1.17
PRDM8-206ENST00000508061 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
PRDM8-206ENST00000508061 WDR97A6NE52 1622 aa22.28■■□□□ 1.16
PRDM8-206ENST00000508061 EIF4G3O43432 1585 aaKnown RBP22.28■■□□□ 1.16
PRDM8-206ENST00000508061 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
PRDM8-206ENST00000508061 AQRO60306 1485 aaKnown RBP eCLIP22.26■■□□□ 1.15
PRDM8-206ENST00000508061 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
PRDM8-206ENST00000508061 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
PRDM8-206ENST00000508061 GAPVD1Q14C86 1478 aa22.14■■□□□ 1.13
PRDM8-206ENST00000508061 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
PRDM8-206ENST00000508061 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
PRDM8-206ENST00000508061 PBRM1Q86U86 1689 aa22.07■■□□□ 1.12
PRDM8-206ENST00000508061 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
PRDM8-206ENST00000508061 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
PRDM8-206ENST00000508061 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
PRDM8-206ENST00000508061 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
PRDM8-206ENST00000508061 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
PRDM8-206ENST00000508061 CHD1O14646 1710 aa21.98■■□□□ 1.11
PRDM8-206ENST00000508061 TRIM41Q8WV44 630 aa21.98■■□□□ 1.11
PRDM8-206ENST00000508061 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
PRDM8-206ENST00000508061 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
PRDM8-206ENST00000508061 CHMP7Q8WUX9 453 aaPredicted RBP21.92■■□□□ 1.1
PRDM8-206ENST00000508061 ADAMTS12P58397 1594 aa21.91■■□□□ 1.1
PRDM8-206ENST00000508061 FBLN2P98095 1184 aa21.91■■□□□ 1.1
PRDM8-206ENST00000508061 FHAD1B1AJZ9 1412 aa21.9■■□□□ 1.1
PRDM8-206ENST00000508061 IGF1RP08069 1367 aa21.89■■□□□ 1.1
PRDM8-206ENST00000508061 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
PRDM8-206ENST00000508061 CUL7Q14999 1698 aa21.82■■□□□ 1.08
PRDM8-206ENST00000508061 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
PRDM8-206ENST00000508061 CLASP1Q7Z460 1538 aa21.77■■□□□ 1.08
PRDM8-206ENST00000508061 NUP160Q12769 1436 aa21.76■■□□□ 1.07
PRDM8-206ENST00000508061 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
PRDM8-206ENST00000508061 CEP170Q5SW79 1584 aa21.72■■□□□ 1.07
PRDM8-206ENST00000508061 EEA1Q15075 1411 aa21.67■■□□□ 1.06
PRDM8-206ENST00000508061 ARHGEF11O15085 1522 aa21.64■■□□□ 1.05
PRDM8-206ENST00000508061 RAPGEF2Q9Y4G8 1499 aa21.63■■□□□ 1.05
PRDM8-206ENST00000508061 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
PRDM8-206ENST00000508061 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
PRDM8-206ENST00000508061 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms