RNA–Protein interactions for RNA: ENST00000507968.1

SSBP2-209, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-209ENST00000507968 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.57
SSBP2-209ENST00000507968 CCDC180Q9P1Z9 1646 aa21.68■■□□□ 1.06
SSBP2-209ENST00000507968 ABCC9O60706 1549 aa20.83■□□□□ 0.93
SSBP2-209ENST00000507968 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
SSBP2-209ENST00000507968 DCAF8L2P0C7V8 631 aa20.72■□□□□ 0.91
SSBP2-209ENST00000507968 DCAF1Q9Y4B6 1507 aa20.58■□□□□ 0.89
SSBP2-209ENST00000507968 MYO15BQ96JP2 1530 aa20.48■□□□□ 0.87
SSBP2-209ENST00000507968 NACADO15069 1562 aa20.39■□□□□ 0.85
SSBP2-209ENST00000507968 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
SSBP2-209ENST00000507968 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
SSBP2-209ENST00000507968 SCRIBQ14160 1630 aa19.85■□□□□ 0.77
SSBP2-209ENST00000507968 PABPN1Q86U42 306 aaKnown RBP eCLIP19.68■□□□□ 0.74
SSBP2-209ENST00000507968 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
SSBP2-209ENST00000507968 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
SSBP2-209ENST00000507968 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
SSBP2-209ENST00000507968 DNAJC5BQ9UF47 199 aa19.24■□□□□ 0.67
SSBP2-209ENST00000507968 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
SSBP2-209ENST00000507968 SUPT5HO00267 1087 aaKnown RBP19.19■□□□□ 0.66
SSBP2-209ENST00000507968 RSF1Q96T23 1441 aaPredicted RBP19.18■□□□□ 0.66
SSBP2-209ENST00000507968 MROH2BQ7Z745 1585 aa19.12■□□□□ 0.65
SSBP2-209ENST00000507968 SMARCA4P51532 1647 aa19.07■□□□□ 0.64
SSBP2-209ENST00000507968 EIF4G1Q04637 1599 aaKnown RBP19.03■□□□□ 0.64
SSBP2-209ENST00000507968 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
SSBP2-209ENST00000507968 SMARCA2P51531 1590 aa18.9■□□□□ 0.62
SSBP2-209ENST00000507968 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
SSBP2-209ENST00000507968 NCAPD3P42695 1498 aa18.89■□□□□ 0.61
SSBP2-209ENST00000507968 WIZO95785 1651 aa18.85■□□□□ 0.61
SSBP2-209ENST00000507968 CC2D2AQ9P2K1 1620 aa18.8■□□□□ 0.6
SSBP2-209ENST00000507968 BAZ1BQ9UIG0 1483 aaKnown RBP18.79■□□□□ 0.6
SSBP2-209ENST00000507968 TOP2AP11388 1531 aaKnown RBP18.75■□□□□ 0.59
SSBP2-209ENST00000507968 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
SSBP2-209ENST00000507968 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
SSBP2-209ENST00000507968 CADPSQ9ULU8 1353 aa18.4■□□□□ 0.54
SSBP2-209ENST00000507968 CFTRP13569 1480 aa18.34■□□□□ 0.53
SSBP2-209ENST00000507968 CHIC1Q5VXU3 224 aa18.25■□□□□ 0.51
SSBP2-209ENST00000507968 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
SSBP2-209ENST00000507968 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
SSBP2-209ENST00000507968 NESP48681 1621 aa18.16■□□□□ 0.5
SSBP2-209ENST00000507968 TRIM41Q8WV44 630 aa18.15■□□□□ 0.5
SSBP2-209ENST00000507968 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
SSBP2-209ENST00000507968 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
SSBP2-209ENST00000507968 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SSBP2-209ENST00000507968 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
SSBP2-209ENST00000507968 ABCC8Q09428 1581 aa17.98■□□□□ 0.47
SSBP2-209ENST00000507968 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
SSBP2-209ENST00000507968 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
SSBP2-209ENST00000507968 CUX1P39880 1505 aa17.89■□□□□ 0.45
SSBP2-209ENST00000507968 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
SSBP2-209ENST00000507968 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
SSBP2-209ENST00000507968 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
SSBP2-209ENST00000507968 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
SSBP2-209ENST00000507968 URB2Q14146 1524 aaKnown RBP17.84■□□□□ 0.45
SSBP2-209ENST00000507968 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.45
SSBP2-209ENST00000507968 KIF21AQ7Z4S6 1674 aa17.8■□□□□ 0.44
SSBP2-209ENST00000507968 BIVM-ERCC5R4GMW8 1640 aa17.8■□□□□ 0.44
SSBP2-209ENST00000507968 SOGA1O94964 1423 aa17.78■□□□□ 0.44
SSBP2-209ENST00000507968 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
SSBP2-209ENST00000507968 WDR62O43379 1518 aa17.74■□□□□ 0.43
SSBP2-209ENST00000507968 POLA1P09884 1462 aaPredicted RBP17.74■□□□□ 0.43
SSBP2-209ENST00000507968 EEA1Q15075 1411 aa17.72■□□□□ 0.43
SSBP2-209ENST00000507968 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.43
SSBP2-209ENST00000507968 CSRNP3Q8WYN3 585 aa17.7■□□□□ 0.42
SSBP2-209ENST00000507968 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
SSBP2-209ENST00000507968 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
SSBP2-209ENST00000507968 THOC2Q8NI27 1593 aaKnown RBP17.66■□□□□ 0.42
SSBP2-209ENST00000507968 IFT140Q96RY7 1462 aa17.65■□□□□ 0.42
SSBP2-209ENST00000507968 ABCA10Q8WWZ4 1543 aa17.65■□□□□ 0.42
SSBP2-209ENST00000507968 CUX2O14529 1486 aa17.64■□□□□ 0.41
SSBP2-209ENST00000507968 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
SSBP2-209ENST00000507968 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
SSBP2-209ENST00000507968 IGF1RP08069 1367 aa17.58■□□□□ 0.4
SSBP2-209ENST00000507968 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
SSBP2-209ENST00000507968 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
SSBP2-209ENST00000507968 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
SSBP2-209ENST00000507968 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSBP2-209ENST00000507968 CARMIL1Q5VZK9 1371 aa17.48■□□□□ 0.39
SSBP2-209ENST00000507968 WDR97A6NE52 1622 aa17.47■□□□□ 0.39
SSBP2-209ENST00000507968 ZNF608Q9ULD9 1512 aaPredicted RBP17.47■□□□□ 0.39
SSBP2-209ENST00000507968 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
SSBP2-209ENST00000507968 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
SSBP2-209ENST00000507968 ERICH3Q5RHP9 1530 aa17.43■□□□□ 0.38
SSBP2-209ENST00000507968 UBTFP17480 764 aaKnown RBP17.42■□□□□ 0.38
SSBP2-209ENST00000507968 ABCA5Q8WWZ7 1642 aa17.41■□□□□ 0.38
SSBP2-209ENST00000507968 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.37
SSBP2-209ENST00000507968 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
SSBP2-209ENST00000507968 FHAD1B1AJZ9 1412 aa17.38■□□□□ 0.37
SSBP2-209ENST00000507968 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
SSBP2-209ENST00000507968 KIF21BO75037 1637 aa17.34■□□□□ 0.37
SSBP2-209ENST00000507968 CHMP7Q8WUX9 453 aaPredicted RBP17.34■□□□□ 0.37
SSBP2-209ENST00000507968 TNIKQ9UKE5 1360 aa17.34■□□□□ 0.37
SSBP2-209ENST00000507968 MAGI1Q96QZ7 1491 aaPredicted RBP17.32■□□□□ 0.36
SSBP2-209ENST00000507968 EIF4G3O43432 1585 aaKnown RBP17.32■□□□□ 0.36
SSBP2-209ENST00000507968 SNAPC4Q5SXM2 1469 aa17.3■□□□□ 0.36
SSBP2-209ENST00000507968 CUL7Q14999 1698 aa17.29■□□□□ 0.36
SSBP2-209ENST00000507968 FBLN2P98095 1184 aa17.28■□□□□ 0.36
SSBP2-209ENST00000507968 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
SSBP2-209ENST00000507968 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
SSBP2-209ENST00000507968 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
SSBP2-209ENST00000507968 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
SSBP2-209ENST00000507968 CEP162Q5TB80 1403 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms