RNA–Protein interactions for RNA: ENST00000507829.5

CCHCR1-224, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-224ENST00000507829 NISCHQ9Y2I1 1504 aa48.67■■■■■ 5.38
CCHCR1-224ENST00000507829 CCDC180Q9P1Z9 1646 aa43.16■■■■■ 4.5
CCHCR1-224ENST00000507829 ABCC9O60706 1549 aa42.04■■■■■ 4.32
CCHCR1-224ENST00000507829 DCAF8L2P0C7V8 631 aa40.58■■■■■ 4.09
CCHCR1-224ENST00000507829 ZCCHC6Q5VYS8 1495 aaKnown RBP40.57■■■■■ 4.08
CCHCR1-224ENST00000507829 NACADO15069 1562 aa40.56■■■■■ 4.08
CCHCR1-224ENST00000507829 RB1CC1Q8TDY2 1594 aa40.55■■■■■ 4.08
CCHCR1-224ENST00000507829 MYO15BQ96JP2 1530 aa40.4■■■■■ 4.06
CCHCR1-224ENST00000507829 DCAF1Q9Y4B6 1507 aa40.29■■■■■ 4.04
CCHCR1-224ENST00000507829 UNC13AQ9UPW8 1703 aa39.59■■■■□ 3.93
CCHCR1-224ENST00000507829 SCRIBQ14160 1630 aa39.37■■■■□ 3.89
CCHCR1-224ENST00000507829 PABPN1Q86U42 306 aaKnown RBP eCLIP39.34■■■■□ 3.89
CCHCR1-224ENST00000507829 BICRAQ9NZM4 1560 aa39.3■■■■□ 3.88
CCHCR1-224ENST00000507829 SHROOM4Q9ULL8 1493 aa38.94■■■■□ 3.82
CCHCR1-224ENST00000507829 DNAJC5BQ9UF47 199 aa38.45■■■■□ 3.75
CCHCR1-224ENST00000507829 EIF4G1Q04637 1599 aaKnown RBP38.25■■■■□ 3.71
CCHCR1-224ENST00000507829 CC2D2AQ9P2K1 1620 aa38.05■■■■□ 3.68
CCHCR1-224ENST00000507829 CECR2Q9BXF3 1484 aa37.88■■■■□ 3.65
CCHCR1-224ENST00000507829 SMARCA4P51532 1647 aa37.7■■■■□ 3.63
CCHCR1-224ENST00000507829 BAZ1AQ9NRL2 1556 aaPredicted RBP37.7■■■■□ 3.63
CCHCR1-224ENST00000507829 MROH2BQ7Z745 1585 aa37.5■■■■□ 3.59
CCHCR1-224ENST00000507829 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
CCHCR1-224ENST00000507829 NCAPD3P42695 1498 aa37.44■■■■□ 3.58
CCHCR1-224ENST00000507829 SMARCA2P51531 1590 aa37.43■■■■□ 3.58
CCHCR1-224ENST00000507829 PEG3Q9GZU2 1588 aa37.35■■■■□ 3.57
CCHCR1-224ENST00000507829 HMGXB3Q12766 1538 aa37.25■■■■□ 3.55
CCHCR1-224ENST00000507829 BAZ1BQ9UIG0 1483 aaKnown RBP37.16■■■■□ 3.54
CCHCR1-224ENST00000507829 RSF1Q96T23 1441 aaPredicted RBP37.15■■■■□ 3.54
CCHCR1-224ENST00000507829 WIZO95785 1651 aa37.09■■■■□ 3.53
CCHCR1-224ENST00000507829 TOP2AP11388 1531 aaKnown RBP36.72■■■■□ 3.47
CCHCR1-224ENST00000507829 NESP48681 1621 aa36.44■■■■□ 3.42
CCHCR1-224ENST00000507829 LAMC3Q9Y6N6 1575 aa36.4■■■■□ 3.42
CCHCR1-224ENST00000507829 CADPSQ9ULU8 1353 aa36.36■■■■□ 3.41
CCHCR1-224ENST00000507829 SUPT5HO00267 1087 aaKnown RBP36.34■■■■□ 3.41
CCHCR1-224ENST00000507829 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
CCHCR1-224ENST00000507829 ERCC6Q03468 1493 aa36.23■■■■□ 3.39
CCHCR1-224ENST00000507829 CFTRP13569 1480 aa36.18■■■■□ 3.38
CCHCR1-224ENST00000507829 PDS5BQ9NTI5 1447 aa36.17■■■■□ 3.38
CCHCR1-224ENST00000507829 KIF21AQ7Z4S6 1674 aa35.99■■■■□ 3.35
CCHCR1-224ENST00000507829 FANCD2Q9BXW9 1451 aa35.92■■■■□ 3.34
CCHCR1-224ENST00000507829 PRDM2Q13029 1718 aa35.87■■■■□ 3.33
CCHCR1-224ENST00000507829 CEP164Q9UPV0 1460 aa35.85■■■■□ 3.33
CCHCR1-224ENST00000507829 THOC2Q8NI27 1593 aaKnown RBP35.84■■■■□ 3.33
CCHCR1-224ENST00000507829 CUX2O14529 1486 aa35.8■■■■□ 3.32
CCHCR1-224ENST00000507829 MRC2Q9UBG0 1479 aa35.76■■■■□ 3.32
CCHCR1-224ENST00000507829 WDR62O43379 1518 aa35.63■■■■□ 3.29
CCHCR1-224ENST00000507829 URB2Q14146 1524 aaKnown RBP35.54■■■■□ 3.28
CCHCR1-224ENST00000507829 ABCC8Q09428 1581 aa35.4■■■■□ 3.26
CCHCR1-224ENST00000507829 TOPBP1Q92547 1522 aa35.37■■■■□ 3.25
CCHCR1-224ENST00000507829 DNMBPQ6XZF7 1577 aa35.33■■■■□ 3.25
CCHCR1-224ENST00000507829 CUX1P39880 1505 aa35.16■■■■□ 3.22
CCHCR1-224ENST00000507829 IFT140Q96RY7 1462 aa35.1■■■■□ 3.21
CCHCR1-224ENST00000507829 POLA1P09884 1462 aaPredicted RBP35.07■■■■□ 3.2
CCHCR1-224ENST00000507829 WRNQ14191 1432 aaPredicted RBP eCLIP35.02■■■■□ 3.2
CCHCR1-224ENST00000507829 FGD5Q6ZNL6 1462 aa35.01■■■■□ 3.19
CCHCR1-224ENST00000507829 SOGA1O94964 1423 aa34.96■■■■□ 3.19
CCHCR1-224ENST00000507829 TARBP1Q13395 1621 aaKnown RBP34.95■■■■□ 3.19
CCHCR1-224ENST00000507829 TOP2BQ02880 1626 aa34.92■■■■□ 3.18
CCHCR1-224ENST00000507829 RAD54L2Q9Y4B4 1467 aa34.91■■■■□ 3.18
CCHCR1-224ENST00000507829 ZNF608Q9ULD9 1512 aaPredicted RBP34.91■■■■□ 3.18
CCHCR1-224ENST00000507829 BIVM-ERCC5R4GMW8 1640 aa34.9■■■■□ 3.18
CCHCR1-224ENST00000507829 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
CCHCR1-224ENST00000507829 EIF4G3O43432 1585 aaKnown RBP34.76■■■■□ 3.16
CCHCR1-224ENST00000507829 AQRO60306 1485 aaKnown RBP eCLIP34.75■■■■□ 3.152e-10■■■■■ 47.9
CCHCR1-224ENST00000507829 TDRD9Q8NDG6 1382 aaKnown RBP34.72■■■■□ 3.15
CCHCR1-224ENST00000507829 WDR97A6NE52 1622 aa34.71■■■■□ 3.15
CCHCR1-224ENST00000507829 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
CCHCR1-224ENST00000507829 GAPVD1Q14C86 1478 aa34.54■■■■□ 3.12
CCHCR1-224ENST00000507829 ABCA5Q8WWZ7 1642 aa34.52■■■■□ 3.12
CCHCR1-224ENST00000507829 GRIN2BQ13224 1484 aa34.52■■■■□ 3.12
CCHCR1-224ENST00000507829 DNAJC5Q9H3Z4 198 aa34.5■■■■□ 3.11
CCHCR1-224ENST00000507829 PBRM1Q86U86 1689 aa34.42■■■■□ 3.1
CCHCR1-224ENST00000507829 SNAPC4Q5SXM2 1469 aa34.42■■■■□ 3.1
CCHCR1-224ENST00000507829 MAGI1Q96QZ7 1491 aaPredicted RBP34.4■■■■□ 3.1
CCHCR1-224ENST00000507829 OSCARQ8IYS5 282 aa34.38■■■■□ 3.09
CCHCR1-224ENST00000507829 TRIM41Q8WV44 630 aa34.34■■■■□ 3.09
CCHCR1-224ENST00000507829 FBLN2P98095 1184 aa34.3■■■■□ 3.08
CCHCR1-224ENST00000507829 ERICH3Q5RHP9 1530 aa34.3■■■■□ 3.08
CCHCR1-224ENST00000507829 KIF27Q86VH2 1401 aa34.29■■■■□ 3.08
CCHCR1-224ENST00000507829 CHD1O14646 1710 aa34.28■■■■□ 3.08
CCHCR1-224ENST00000507829 SYNJ2O15056 1496 aa34.27■■■■□ 3.08
CCHCR1-224ENST00000507829 CHMP7Q8WUX9 453 aaPredicted RBP34.25■■■■□ 3.07
CCHCR1-224ENST00000507829 ADAMTS12P58397 1594 aa34.17■■■■□ 3.06
CCHCR1-224ENST00000507829 FHAD1B1AJZ9 1412 aa34.16■■■■□ 3.06
CCHCR1-224ENST00000507829 IGF1RP08069 1367 aa34.14■■■■□ 3.06
CCHCR1-224ENST00000507829 GRIN2AQ12879 1464 aa34.07■■■■□ 3.04
CCHCR1-224ENST00000507829 CHIC1Q5VXU3 224 aa34.05■■■■□ 3.04
CCHCR1-224ENST00000507829 RUSC2Q8N2Y8 1516 aa34.01■■■■□ 3.04
CCHCR1-224ENST00000507829 CUL7Q14999 1698 aa33.99■■■■□ 3.03
CCHCR1-224ENST00000507829 CLASP1Q7Z460 1538 aa33.94■■■■□ 3.02
CCHCR1-224ENST00000507829 CARMIL1Q5VZK9 1371 aa33.93■■■■□ 3.02
CCHCR1-224ENST00000507829 NUP160Q12769 1436 aa33.91■■■■□ 3.02
CCHCR1-224ENST00000507829 CEP170Q5SW79 1584 aa33.87■■■■□ 3.01
CCHCR1-224ENST00000507829 ARHGEF11O15085 1522 aa33.78■■■■□ 3
CCHCR1-224ENST00000507829 EEA1Q15075 1411 aa33.77■■■■□ 3
CCHCR1-224ENST00000507829 RIMBP3CA6NJZ7 1639 aa33.75■■■□□ 2.99
CCHCR1-224ENST00000507829 RIMBP3BA6NNM3 1639 aa33.75■■■□□ 2.99
CCHCR1-224ENST00000507829 RIMBP3Q9UFD9 1639 aa33.75■■■□□ 2.99
CCHCR1-224ENST00000507829 RAPGEF2Q9Y4G8 1499 aa33.75■■■□□ 2.99
CCHCR1-224ENST00000507829 CSRNP3Q8WYN3 585 aa33.71■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms