RNA–Protein interactions for RNA: ENST00000507827.5

LRAT-206, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-206ENST00000507827 NISCHQ9Y2I1 1504 aa16.19■□□□□ 0.18
LRAT-206ENST00000507827 CCDC180Q9P1Z9 1646 aa14.07□□□□□ -0.16
LRAT-206ENST00000507827 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
LRAT-206ENST00000507827 ABCC9O60706 1549 aa13.45□□□□□ -0.26
LRAT-206ENST00000507827 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
LRAT-206ENST00000507827 SHROOM4Q9ULL8 1493 aa13.32□□□□□ -0.28
LRAT-206ENST00000507827 MYO15BQ96JP2 1530 aa13.21□□□□□ -0.3
LRAT-206ENST00000507827 DCAF8L2P0C7V8 631 aa13.16□□□□□ -0.3
LRAT-206ENST00000507827 NACADO15069 1562 aa12.99□□□□□ -0.33
LRAT-206ENST00000507827 SCRIBQ14160 1630 aa12.92□□□□□ -0.34
LRAT-206ENST00000507827 SUPT5HO00267 1087 aaKnown RBP12.92□□□□□ -0.34
LRAT-206ENST00000507827 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
LRAT-206ENST00000507827 UNC13AQ9UPW8 1703 aa12.64□□□□□ -0.39
LRAT-206ENST00000507827 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
LRAT-206ENST00000507827 DNAJC5BQ9UF47 199 aa12.62□□□□□ -0.39
LRAT-206ENST00000507827 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
LRAT-206ENST00000507827 CHIC1Q5VXU3 224 aa12.53□□□□□ -0.4
LRAT-206ENST00000507827 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
LRAT-206ENST00000507827 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
LRAT-206ENST00000507827 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
LRAT-206ENST00000507827 WIZO95785 1651 aa12.45□□□□□ -0.42
LRAT-206ENST00000507827 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
LRAT-206ENST00000507827 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
LRAT-206ENST00000507827 TOP2AP11388 1531 aaKnown RBP12.33□□□□□ -0.44
LRAT-206ENST00000507827 PEG3Q9GZU2 1588 aa12.27□□□□□ -0.45
LRAT-206ENST00000507827 EIF4G1Q04637 1599 aaKnown RBP12.27□□□□□ -0.45
LRAT-206ENST00000507827 SMARCA2P51531 1590 aa12.22□□□□□ -0.45
LRAT-206ENST00000507827 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
LRAT-206ENST00000507827 TRIM41Q8WV44 630 aa12.14□□□□□ -0.47
LRAT-206ENST00000507827 CC2D2AQ9P2K1 1620 aa12.14□□□□□ -0.47
LRAT-206ENST00000507827 ATAD2BQ9ULI0 1458 aa12.11□□□□□ -0.47
LRAT-206ENST00000507827 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
LRAT-206ENST00000507827 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
LRAT-206ENST00000507827 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
LRAT-206ENST00000507827 HMGXB3Q12766 1538 aa12.01□□□□□ -0.49
LRAT-206ENST00000507827 NCAPD3P42695 1498 aa11.96□□□□□ -0.49
LRAT-206ENST00000507827 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
LRAT-206ENST00000507827 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
LRAT-206ENST00000507827 EEA1Q15075 1411 aa11.87□□□□□ -0.51
LRAT-206ENST00000507827 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
LRAT-206ENST00000507827 PELP1Q8IZL8 1130 aaKnown RBP11.85□□□□□ -0.51
LRAT-206ENST00000507827 PRDM2Q13029 1718 aa11.84□□□□□ -0.51
LRAT-206ENST00000507827 BIVM-ERCC5R4GMW8 1640 aa11.81□□□□□ -0.52
LRAT-206ENST00000507827 TOP2BQ02880 1626 aa11.81□□□□□ -0.52
LRAT-206ENST00000507827 SOGA1O94964 1423 aa11.8□□□□□ -0.52
LRAT-206ENST00000507827 CFTRP13569 1480 aa11.77□□□□□ -0.53
LRAT-206ENST00000507827 PCGF6Q9BYE7 350 aa11.76□□□□□ -0.53
LRAT-206ENST00000507827 RUSC2Q8N2Y8 1516 aa11.75□□□□□ -0.53
LRAT-206ENST00000507827 KIF21BO75037 1637 aa11.75□□□□□ -0.53
LRAT-206ENST00000507827 TRIM26Q12899 539 aaPredicted RBP11.72□□□□□ -0.53
LRAT-206ENST00000507827 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
LRAT-206ENST00000507827 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
LRAT-206ENST00000507827 TNIKQ9UKE5 1360 aa11.71□□□□□ -0.53
LRAT-206ENST00000507827 EHMT2Q96KQ7 1210 aa11.7□□□□□ -0.54
LRAT-206ENST00000507827 CEP164Q9UPV0 1460 aa11.69□□□□□ -0.54
LRAT-206ENST00000507827 CUX1P39880 1505 aa11.69□□□□□ -0.54
LRAT-206ENST00000507827 CEP162Q5TB80 1403 aa11.68□□□□□ -0.54
LRAT-206ENST00000507827 HRCP23327 699 aa11.67□□□□□ -0.54
LRAT-206ENST00000507827 CADPSQ9ULU8 1353 aa11.65□□□□□ -0.54
LRAT-206ENST00000507827 MYT1Q01538 1121 aa11.63□□□□□ -0.55
LRAT-206ENST00000507827 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
LRAT-206ENST00000507827 RAPGEF2Q9Y4G8 1499 aa11.57□□□□□ -0.56
LRAT-206ENST00000507827 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
LRAT-206ENST00000507827 NESP48681 1621 aa11.57□□□□□ -0.56
LRAT-206ENST00000507827 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
LRAT-206ENST00000507827 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
LRAT-206ENST00000507827 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
LRAT-206ENST00000507827 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
LRAT-206ENST00000507827 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
LRAT-206ENST00000507827 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
LRAT-206ENST00000507827 CLIP1P30622 1438 aa11.52□□□□□ -0.57
LRAT-206ENST00000507827 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
LRAT-206ENST00000507827 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
LRAT-206ENST00000507827 CUX2O14529 1486 aa11.48□□□□□ -0.57
LRAT-206ENST00000507827 VPS8Q8N3P4 1428 aa11.47□□□□□ -0.57
LRAT-206ENST00000507827 TOPBP1Q92547 1522 aa11.46□□□□□ -0.57
LRAT-206ENST00000507827 KIF21AQ7Z4S6 1674 aa11.45□□□□□ -0.58
LRAT-206ENST00000507827 WDR97A6NE52 1622 aa11.43□□□□□ -0.58
LRAT-206ENST00000507827 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
LRAT-206ENST00000507827 THOC2Q8NI27 1593 aaKnown RBP11.43□□□□□ -0.58
LRAT-206ENST00000507827 PPARGC1BQ86YN6 1023 aaKnown RBP11.43□□□□□ -0.58
LRAT-206ENST00000507827 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
LRAT-206ENST00000507827 PDS5BQ9NTI5 1447 aa11.42□□□□□ -0.58
LRAT-206ENST00000507827 IGF1RP08069 1367 aa11.41□□□□□ -0.58
LRAT-206ENST00000507827 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
LRAT-206ENST00000507827 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.59
LRAT-206ENST00000507827 URB2Q14146 1524 aaKnown RBP11.39□□□□□ -0.59
LRAT-206ENST00000507827 CUL7Q14999 1698 aa11.39□□□□□ -0.59
LRAT-206ENST00000507827 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
LRAT-206ENST00000507827 CARMIL1Q5VZK9 1371 aa11.36□□□□□ -0.59
LRAT-206ENST00000507827 ABCA5Q8WWZ7 1642 aa11.35□□□□□ -0.59
LRAT-206ENST00000507827 ARHGAP35Q9NRY4 1499 aa11.34□□□□□ -0.59
LRAT-206ENST00000507827 CTTNBP2Q8WZ74 1663 aa11.32□□□□□ -0.6
LRAT-206ENST00000507827 TARBP1Q13395 1621 aaKnown RBP11.3□□□□□ -0.6
LRAT-206ENST00000507827 APLP2Q06481 763 aa11.3□□□□□ -0.6
LRAT-206ENST00000507827 TTBK1Q5TCY1 1321 aaPredicted RBP11.29□□□□□ -0.6
LRAT-206ENST00000507827 RANGAP1P46060 587 aaPredicted RBP11.28□□□□□ -0.6
LRAT-206ENST00000507827 EFCAB5A4FU69 1503 aa11.27□□□□□ -0.61
LRAT-206ENST00000507827 MRC2Q9UBG0 1479 aa11.26□□□□□ -0.61
LRAT-206ENST00000507827 MAP3K1Q13233 1512 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms