RNA–Protein interactions for RNA: ENST00000507771.5

ITGA3-210, Transcript of integrin subunit alpha 3, humanhuman

TSL 3

Gene ITGA3, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-210ENST00000507771 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
ITGA3-210ENST00000507771 CCDC180Q9P1Z9 1646 aa23.26■■□□□ 1.31
ITGA3-210ENST00000507771 ABCC9O60706 1549 aa22.48■■□□□ 1.19
ITGA3-210ENST00000507771 DCAF8L2P0C7V8 631 aa21.95■■□□□ 1.1
ITGA3-210ENST00000507771 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
ITGA3-210ENST00000507771 NACADO15069 1562 aa21.82■■□□□ 1.08
ITGA3-210ENST00000507771 RB1CC1Q8TDY2 1594 aa21.79■■□□□ 1.08
ITGA3-210ENST00000507771 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
ITGA3-210ENST00000507771 MYO15BQ96JP2 1530 aa21.77■■□□□ 1.08
ITGA3-210ENST00000507771 SCRIBQ14160 1630 aa21.24■□□□□ 0.99
ITGA3-210ENST00000507771 UNC13AQ9UPW8 1703 aa21.19■□□□□ 0.98
ITGA3-210ENST00000507771 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
ITGA3-210ENST00000507771 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.95
ITGA3-210ENST00000507771 SHROOM4Q9ULL8 1493 aa20.96■□□□□ 0.95
ITGA3-210ENST00000507771 EIF4G1Q04637 1599 aaKnown RBP20.5■□□□□ 0.87
ITGA3-210ENST00000507771 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
ITGA3-210ENST00000507771 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
ITGA3-210ENST00000507771 SMARCA4P51532 1647 aa20.34■□□□□ 0.85
ITGA3-210ENST00000507771 CC2D2AQ9P2K1 1620 aa20.34■□□□□ 0.85
ITGA3-210ENST00000507771 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
ITGA3-210ENST00000507771 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
ITGA3-210ENST00000507771 SMARCA2P51531 1590 aa20.19■□□□□ 0.82
ITGA3-210ENST00000507771 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
ITGA3-210ENST00000507771 RSF1Q96T23 1441 aaPredicted RBP20.13■□□□□ 0.81
ITGA3-210ENST00000507771 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
ITGA3-210ENST00000507771 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
ITGA3-210ENST00000507771 BAZ1BQ9UIG0 1483 aaKnown RBP20.05■□□□□ 0.8
ITGA3-210ENST00000507771 HMGXB3Q12766 1538 aa20.05■□□□□ 0.8
ITGA3-210ENST00000507771 WIZO95785 1651 aa20.03■□□□□ 0.8
ITGA3-210ENST00000507771 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
ITGA3-210ENST00000507771 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
ITGA3-210ENST00000507771 CCDC88BA6NC98 1476 aa19.63■□□□□ 0.73
ITGA3-210ENST00000507771 CADPSQ9ULU8 1353 aa19.57■□□□□ 0.72
ITGA3-210ENST00000507771 LAMC3Q9Y6N6 1575 aa19.56■□□□□ 0.72
ITGA3-210ENST00000507771 NESP48681 1621 aa19.5■□□□□ 0.71
ITGA3-210ENST00000507771 CFTRP13569 1480 aa19.48■□□□□ 0.71
ITGA3-210ENST00000507771 PDS5BQ9NTI5 1447 aa19.46■□□□□ 0.71
ITGA3-210ENST00000507771 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
ITGA3-210ENST00000507771 PRDM2Q13029 1718 aa19.36■□□□□ 0.69
ITGA3-210ENST00000507771 FANCD2Q9BXW9 1451 aa19.34■□□□□ 0.69
ITGA3-210ENST00000507771 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
ITGA3-210ENST00000507771 KIF21AQ7Z4S6 1674 aa19.29■□□□□ 0.68
ITGA3-210ENST00000507771 MRC2Q9UBG0 1479 aa19.21■□□□□ 0.67
ITGA3-210ENST00000507771 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
ITGA3-210ENST00000507771 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
ITGA3-210ENST00000507771 WDR62O43379 1518 aa19.1■□□□□ 0.65
ITGA3-210ENST00000507771 CUX2O14529 1486 aa19.09■□□□□ 0.65
ITGA3-210ENST00000507771 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
ITGA3-210ENST00000507771 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
ITGA3-210ENST00000507771 TOPBP1Q92547 1522 aa19.04■□□□□ 0.64
ITGA3-210ENST00000507771 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
ITGA3-210ENST00000507771 CUX1P39880 1505 aa18.97■□□□□ 0.63
ITGA3-210ENST00000507771 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
ITGA3-210ENST00000507771 SYNJ1O43426 1573 aa18.9■□□□□ 0.62
ITGA3-210ENST00000507771 BIVM-ERCC5R4GMW8 1640 aa18.9■□□□□ 0.62
ITGA3-210ENST00000507771 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
ITGA3-210ENST00000507771 FGD5Q6ZNL6 1462 aa18.9■□□□□ 0.62
ITGA3-210ENST00000507771 IFT140Q96RY7 1462 aa18.89■□□□□ 0.61
ITGA3-210ENST00000507771 SOGA1O94964 1423 aa18.86■□□□□ 0.61
ITGA3-210ENST00000507771 TRIM41Q8WV44 630 aa18.83■□□□□ 0.6
ITGA3-210ENST00000507771 RAD54L2Q9Y4B4 1467 aa18.8■□□□□ 0.6
ITGA3-210ENST00000507771 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
ITGA3-210ENST00000507771 ABCA10Q8WWZ4 1543 aa18.74■□□□□ 0.59
ITGA3-210ENST00000507771 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
ITGA3-210ENST00000507771 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
ITGA3-210ENST00000507771 ZNF608Q9ULD9 1512 aaPredicted RBP18.7■□□□□ 0.58
ITGA3-210ENST00000507771 TDRD9Q8NDG6 1382 aaKnown RBP18.69■□□□□ 0.58
ITGA3-210ENST00000507771 EIF4G3O43432 1585 aaKnown RBP18.68■□□□□ 0.58
ITGA3-210ENST00000507771 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.58
ITGA3-210ENST00000507771 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
ITGA3-210ENST00000507771 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
ITGA3-210ENST00000507771 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
ITGA3-210ENST00000507771 ABCA5Q8WWZ7 1642 aa18.6■□□□□ 0.57
ITGA3-210ENST00000507771 PBRM1Q86U86 1689 aa18.55■□□□□ 0.56
ITGA3-210ENST00000507771 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
ITGA3-210ENST00000507771 MAGI1Q96QZ7 1491 aaPredicted RBP18.53■□□□□ 0.56
ITGA3-210ENST00000507771 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.55
ITGA3-210ENST00000507771 EEA1Q15075 1411 aa18.49■□□□□ 0.55
ITGA3-210ENST00000507771 FBLN2P98095 1184 aa18.47■□□□□ 0.55
ITGA3-210ENST00000507771 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
ITGA3-210ENST00000507771 IGF1RP08069 1367 aa18.46■□□□□ 0.55
ITGA3-210ENST00000507771 FHAD1B1AJZ9 1412 aa18.45■□□□□ 0.54
ITGA3-210ENST00000507771 SYNJ2O15056 1496 aa18.45■□□□□ 0.54
ITGA3-210ENST00000507771 CUL7Q14999 1698 aa18.44■□□□□ 0.54
ITGA3-210ENST00000507771 RUSC2Q8N2Y8 1516 aa18.44■□□□□ 0.54
ITGA3-210ENST00000507771 ADAMTS12P58397 1594 aa18.42■□□□□ 0.54
ITGA3-210ENST00000507771 FAM9AQ8IZU1 332 aaPredicted RBP18.4■□□□□ 0.54
ITGA3-210ENST00000507771 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
ITGA3-210ENST00000507771 CSRNP3Q8WYN3 585 aa18.39■□□□□ 0.53
ITGA3-210ENST00000507771 OSCARQ8IYS5 282 aa18.38■□□□□ 0.53
ITGA3-210ENST00000507771 CHD1O14646 1710 aa18.37■□□□□ 0.53
ITGA3-210ENST00000507771 GRIN2AQ12879 1464 aa18.34■□□□□ 0.53
ITGA3-210ENST00000507771 RAPGEF2Q9Y4G8 1499 aa18.32■□□□□ 0.52
ITGA3-210ENST00000507771 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
ITGA3-210ENST00000507771 NUP160Q12769 1436 aa18.23■□□□□ 0.51
ITGA3-210ENST00000507771 KIF21BO75037 1637 aa18.21■□□□□ 0.51
ITGA3-210ENST00000507771 CEP170Q5SW79 1584 aa18.21■□□□□ 0.51
ITGA3-210ENST00000507771 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
ITGA3-210ENST00000507771 KIAA0586Q9BVV6 1533 aa18.17■□□□□ 0.5
ITGA3-210ENST00000507771 GOLGA3Q08378 1498 aa18.16■□□□□ 0.5
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