RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 NISCHQ9Y2I1 1504 aa34.45■■■■□ 3.11
CCHCR1-222ENST00000507459 CCDC180Q9P1Z9 1646 aa30.62■■■□□ 2.49
CCHCR1-222ENST00000507459 ABCC9O60706 1549 aa30.26■■■□□ 2.43
CCHCR1-222ENST00000507459 DCAF8L2P0C7V8 631 aa29.05■■■□□ 2.24
CCHCR1-222ENST00000507459 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
CCHCR1-222ENST00000507459 NACADO15069 1562 aa28.87■■■□□ 2.21
CCHCR1-222ENST00000507459 ZCCHC6Q5VYS8 1495 aaKnown RBP28.65■■■□□ 2.18
CCHCR1-222ENST00000507459 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
CCHCR1-222ENST00000507459 DCAF1Q9Y4B6 1507 aa28.43■■■□□ 2.14
CCHCR1-222ENST00000507459 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
CCHCR1-222ENST00000507459 UNC13AQ9UPW8 1703 aa28.29■■■□□ 2.12
CCHCR1-222ENST00000507459 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
CCHCR1-222ENST00000507459 SCRIBQ14160 1630 aa28.03■■■□□ 2.08
CCHCR1-222ENST00000507459 DNAJC5BQ9UF47 199 aa27.93■■■□□ 2.06
CCHCR1-222ENST00000507459 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
CCHCR1-222ENST00000507459 EIF4G1Q04637 1599 aaKnown RBP27.36■■□□□ 1.97
CCHCR1-222ENST00000507459 CC2D2AQ9P2K1 1620 aa27.31■■□□□ 1.96
CCHCR1-222ENST00000507459 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
CCHCR1-222ENST00000507459 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
CCHCR1-222ENST00000507459 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.86
CCHCR1-222ENST00000507459 ATAD2BQ9ULI0 1458 aa26.68■■□□□ 1.86
CCHCR1-222ENST00000507459 NCAPD3P42695 1498 aa26.66■■□□□ 1.86
CCHCR1-222ENST00000507459 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
CCHCR1-222ENST00000507459 MROH2BQ7Z745 1585 aa26.58■■□□□ 1.85
CCHCR1-222ENST00000507459 HMGXB3Q12766 1538 aa26.48■■□□□ 1.83
CCHCR1-222ENST00000507459 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
CCHCR1-222ENST00000507459 PEG3Q9GZU2 1588 aa26.45■■□□□ 1.82
CCHCR1-222ENST00000507459 WIZO95785 1651 aa26.28■■□□□ 1.8
CCHCR1-222ENST00000507459 RSF1Q96T23 1441 aaPredicted RBP26.22■■□□□ 1.79
CCHCR1-222ENST00000507459 NESP48681 1621 aa26.13■■□□□ 1.77
CCHCR1-222ENST00000507459 ERCC6Q03468 1493 aa26.09■■□□□ 1.77
CCHCR1-222ENST00000507459 LAMC3Q9Y6N6 1575 aa25.96■■□□□ 1.75
CCHCR1-222ENST00000507459 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
CCHCR1-222ENST00000507459 CADPSQ9ULU8 1353 aa25.91■■□□□ 1.74
CCHCR1-222ENST00000507459 PDS5BQ9NTI5 1447 aa25.84■■□□□ 1.73
CCHCR1-222ENST00000507459 CUX2O14529 1486 aa25.79■■□□□ 1.72
CCHCR1-222ENST00000507459 KIF21AQ7Z4S6 1674 aa25.77■■□□□ 1.72
CCHCR1-222ENST00000507459 CCDC88BA6NC98 1476 aa25.71■■□□□ 1.71
CCHCR1-222ENST00000507459 CFTRP13569 1480 aa25.69■■□□□ 1.7
CCHCR1-222ENST00000507459 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
CCHCR1-222ENST00000507459 FANCD2Q9BXW9 1451 aa25.61■■□□□ 1.69
CCHCR1-222ENST00000507459 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
CCHCR1-222ENST00000507459 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
CCHCR1-222ENST00000507459 MRC2Q9UBG0 1479 aa25.57■■□□□ 1.68
CCHCR1-222ENST00000507459 WDR62O43379 1518 aa25.46■■□□□ 1.67
CCHCR1-222ENST00000507459 PRDM2Q13029 1718 aa25.43■■□□□ 1.66
CCHCR1-222ENST00000507459 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
CCHCR1-222ENST00000507459 DNAJC5Q9H3Z4 198 aa25.24■■□□□ 1.63
CCHCR1-222ENST00000507459 TOPBP1Q92547 1522 aa25.17■■□□□ 1.62
CCHCR1-222ENST00000507459 ABCC8Q09428 1581 aa25.14■■□□□ 1.61
CCHCR1-222ENST00000507459 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
CCHCR1-222ENST00000507459 IFT140Q96RY7 1462 aa25.04■■□□□ 1.6
CCHCR1-222ENST00000507459 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
CCHCR1-222ENST00000507459 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
CCHCR1-222ENST00000507459 CUX1P39880 1505 aa24.93■■□□□ 1.58
CCHCR1-222ENST00000507459 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
CCHCR1-222ENST00000507459 SOGA1O94964 1423 aa24.89■■□□□ 1.58
CCHCR1-222ENST00000507459 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.57
CCHCR1-222ENST00000507459 TARBP1Q13395 1621 aaKnown RBP24.88■■□□□ 1.57
CCHCR1-222ENST00000507459 AQRO60306 1485 aaKnown RBP eCLIP24.84■■□□□ 1.572e-10■■■■■ 47.9
CCHCR1-222ENST00000507459 EIF4G3O43432 1585 aaKnown RBP24.83■■□□□ 1.57
CCHCR1-222ENST00000507459 TDRD9Q8NDG6 1382 aaKnown RBP24.8■■□□□ 1.56
CCHCR1-222ENST00000507459 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
CCHCR1-222ENST00000507459 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
CCHCR1-222ENST00000507459 SYNJ1O43426 1573 aa24.67■■□□□ 1.54
CCHCR1-222ENST00000507459 FBLN2P98095 1184 aa24.66■■□□□ 1.54
CCHCR1-222ENST00000507459 TOP2BQ02880 1626 aa24.64■■□□□ 1.54
CCHCR1-222ENST00000507459 BIVM-ERCC5R4GMW8 1640 aa24.64■■□□□ 1.53
CCHCR1-222ENST00000507459 WDR97A6NE52 1622 aa24.62■■□□□ 1.53
CCHCR1-222ENST00000507459 ABCA10Q8WWZ4 1543 aa24.61■■□□□ 1.53
CCHCR1-222ENST00000507459 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.53
CCHCR1-222ENST00000507459 GRIN2BQ13224 1484 aa24.58■■□□□ 1.52
CCHCR1-222ENST00000507459 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.52
CCHCR1-222ENST00000507459 CHD1O14646 1710 aa24.55■■□□□ 1.52
CCHCR1-222ENST00000507459 CHMP7Q8WUX9 453 aaPredicted RBP24.52■■□□□ 1.52
CCHCR1-222ENST00000507459 MAGI1Q96QZ7 1491 aaPredicted RBP24.51■■□□□ 1.51
CCHCR1-222ENST00000507459 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
CCHCR1-222ENST00000507459 PBRM1Q86U86 1689 aa24.49■■□□□ 1.51
CCHCR1-222ENST00000507459 TRIM41Q8WV44 630 aa24.45■■□□□ 1.5
CCHCR1-222ENST00000507459 SYNJ2O15056 1496 aa24.43■■□□□ 1.5
CCHCR1-222ENST00000507459 RIMBP3CA6NJZ7 1639 aa24.34■■□□□ 1.49
CCHCR1-222ENST00000507459 RIMBP3BA6NNM3 1639 aa24.34■■□□□ 1.49
CCHCR1-222ENST00000507459 RIMBP3Q9UFD9 1639 aa24.34■■□□□ 1.49
CCHCR1-222ENST00000507459 ARHGEF11O15085 1522 aa24.33■■□□□ 1.49
CCHCR1-222ENST00000507459 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
CCHCR1-222ENST00000507459 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
CCHCR1-222ENST00000507459 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
CCHCR1-222ENST00000507459 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
CCHCR1-222ENST00000507459 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
CCHCR1-222ENST00000507459 KIF27Q86VH2 1401 aa24.23■■□□□ 1.47
CCHCR1-222ENST00000507459 CYB5RLQ6IPT4 315 aa24.21■■□□□ 1.47
CCHCR1-222ENST00000507459 IGF1RP08069 1367 aa24.16■■□□□ 1.46
CCHCR1-222ENST00000507459 NUP160Q12769 1436 aa24.14■■□□□ 1.45
CCHCR1-222ENST00000507459 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
CCHCR1-222ENST00000507459 ARAP1Q96P48 1450 aa24.13■■□□□ 1.45
CCHCR1-222ENST00000507459 CUL7Q14999 1698 aa24.04■■□□□ 1.44
CCHCR1-222ENST00000507459 CARMIL1Q5VZK9 1371 aa24.03■■□□□ 1.44
CCHCR1-222ENST00000507459 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
CCHCR1-222ENST00000507459 ERCC6L2Q5T890 1561 aa23.97■■□□□ 1.43
CCHCR1-222ENST00000507459 JPH4Q96JJ6 628 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms