RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 NISCHQ9Y2I1 1504 aa17.72■□□□□ 0.43
SMAD1-206ENST00000507367 CCDC180Q9P1Z9 1646 aa15.6■□□□□ 0.09
SMAD1-206ENST00000507367 ABCC9O60706 1549 aa14.85□□□□□ -0.03
SMAD1-206ENST00000507367 ZCCHC6Q5VYS8 1495 aaKnown RBP14.84□□□□□ -0.03
SMAD1-206ENST00000507367 DCAF8L2P0C7V8 631 aa14.71□□□□□ -0.05
SMAD1-206ENST00000507367 DCAF1Q9Y4B6 1507 aa14.7□□□□□ -0.06
SMAD1-206ENST00000507367 MYO15BQ96JP2 1530 aa14.62□□□□□ -0.07
SMAD1-206ENST00000507367 NACADO15069 1562 aa14.58□□□□□ -0.08
SMAD1-206ENST00000507367 RB1CC1Q8TDY2 1594 aa14.51□□□□□ -0.09
SMAD1-206ENST00000507367 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
SMAD1-206ENST00000507367 SCRIBQ14160 1630 aa14.25□□□□□ -0.13
SMAD1-206ENST00000507367 UNC13AQ9UPW8 1703 aa14.09□□□□□ -0.15
SMAD1-206ENST00000507367 BICRAQ9NZM4 1560 aa13.96□□□□□ -0.18
SMAD1-206ENST00000507367 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
SMAD1-206ENST00000507367 BAZ1AQ9NRL2 1556 aaPredicted RBP13.75□□□□□ -0.21
SMAD1-206ENST00000507367 CECR2Q9BXF3 1484 aa13.71□□□□□ -0.21
SMAD1-206ENST00000507367 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
SMAD1-206ENST00000507367 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
SMAD1-206ENST00000507367 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
SMAD1-206ENST00000507367 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
SMAD1-206ENST00000507367 EIF4G1Q04637 1599 aaKnown RBP13.61□□□□□ -0.23
SMAD1-206ENST00000507367 SMARCA2P51531 1590 aa13.54□□□□□ -0.24
SMAD1-206ENST00000507367 PEG3Q9GZU2 1588 aa13.52□□□□□ -0.25
SMAD1-206ENST00000507367 WIZO95785 1651 aa13.51□□□□□ -0.25
SMAD1-206ENST00000507367 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
SMAD1-206ENST00000507367 BAZ1BQ9UIG0 1483 aaKnown RBP13.44□□□□□ -0.26
SMAD1-206ENST00000507367 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
SMAD1-206ENST00000507367 TOP2AP11388 1531 aaKnown RBP13.44□□□□□ -0.26
SMAD1-206ENST00000507367 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
SMAD1-206ENST00000507367 HMGXB3Q12766 1538 aa13.41□□□□□ -0.26
SMAD1-206ENST00000507367 CCDC88BA6NC98 1476 aa13.25□□□□□ -0.29
SMAD1-206ENST00000507367 DNAJC5BQ9UF47 199 aa13.17□□□□□ -0.3
SMAD1-206ENST00000507367 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
SMAD1-206ENST00000507367 CFTRP13569 1480 aa13.06□□□□□ -0.32
SMAD1-206ENST00000507367 LAMC3Q9Y6N6 1575 aa13.03□□□□□ -0.32
SMAD1-206ENST00000507367 PRDM2Q13029 1718 aa13□□□□□ -0.33
SMAD1-206ENST00000507367 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.33
SMAD1-206ENST00000507367 CHIC1Q5VXU3 224 aa12.95□□□□□ -0.34
SMAD1-206ENST00000507367 NESP48681 1621 aa12.93□□□□□ -0.34
SMAD1-206ENST00000507367 TRIM41Q8WV44 630 aa12.93□□□□□ -0.34
SMAD1-206ENST00000507367 FANCD2Q9BXW9 1451 aa12.92□□□□□ -0.34
SMAD1-206ENST00000507367 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
SMAD1-206ENST00000507367 CEP164Q9UPV0 1460 aa12.89□□□□□ -0.35
SMAD1-206ENST00000507367 ABCC8Q09428 1581 aa12.89□□□□□ -0.35
SMAD1-206ENST00000507367 ERCC6Q03468 1493 aa12.84□□□□□ -0.35
SMAD1-206ENST00000507367 KIF21AQ7Z4S6 1674 aa12.81□□□□□ -0.36
SMAD1-206ENST00000507367 TOP2BQ02880 1626 aa12.8□□□□□ -0.36
SMAD1-206ENST00000507367 SYNJ1O43426 1573 aa12.79□□□□□ -0.36
SMAD1-206ENST00000507367 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
SMAD1-206ENST00000507367 CUX1P39880 1505 aa12.78□□□□□ -0.36
SMAD1-206ENST00000507367 DNMBPQ6XZF7 1577 aa12.78□□□□□ -0.36
SMAD1-206ENST00000507367 MRC2Q9UBG0 1479 aa12.77□□□□□ -0.37
SMAD1-206ENST00000507367 TOPBP1Q92547 1522 aa12.74□□□□□ -0.37
SMAD1-206ENST00000507367 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
SMAD1-206ENST00000507367 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
SMAD1-206ENST00000507367 WDR62O43379 1518 aa12.69□□□□□ -0.38
SMAD1-206ENST00000507367 EEA1Q15075 1411 aa12.68□□□□□ -0.38
SMAD1-206ENST00000507367 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
SMAD1-206ENST00000507367 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
SMAD1-206ENST00000507367 SOGA1O94964 1423 aa12.64□□□□□ -0.39
SMAD1-206ENST00000507367 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
SMAD1-206ENST00000507367 FAM9AQ8IZU1 332 aaPredicted RBP12.6□□□□□ -0.39
SMAD1-206ENST00000507367 ABCA10Q8WWZ4 1543 aa12.6□□□□□ -0.39
SMAD1-206ENST00000507367 CUX2O14529 1486 aa12.59□□□□□ -0.39
SMAD1-206ENST00000507367 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
SMAD1-206ENST00000507367 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
SMAD1-206ENST00000507367 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
SMAD1-206ENST00000507367 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
SMAD1-206ENST00000507367 TARBP1Q13395 1621 aaKnown RBP12.55□□□□□ -0.4
SMAD1-206ENST00000507367 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.4
SMAD1-206ENST00000507367 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
SMAD1-206ENST00000507367 TDRD9Q8NDG6 1382 aaKnown RBP12.5□□□□□ -0.41
SMAD1-206ENST00000507367 ABCA5Q8WWZ7 1642 aa12.49□□□□□ -0.41
SMAD1-206ENST00000507367 ERICH3Q5RHP9 1530 aa12.47□□□□□ -0.41
SMAD1-206ENST00000507367 IGF1RP08069 1367 aa12.46□□□□□ -0.41
SMAD1-206ENST00000507367 KIF21BO75037 1637 aa12.46□□□□□ -0.41
SMAD1-206ENST00000507367 GOLGA3Q08378 1498 aa12.46□□□□□ -0.42
SMAD1-206ENST00000507367 GRIN2BQ13224 1484 aa12.46□□□□□ -0.42
SMAD1-206ENST00000507367 CUL7Q14999 1698 aa12.45□□□□□ -0.42
SMAD1-206ENST00000507367 AQRO60306 1485 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMAD1-206ENST00000507367 EIF4G3O43432 1585 aaKnown RBP12.44□□□□□ -0.42
SMAD1-206ENST00000507367 ZNF608Q9ULD9 1512 aaPredicted RBP12.44□□□□□ -0.42
SMAD1-206ENST00000507367 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
SMAD1-206ENST00000507367 PBRM1Q86U86 1689 aa12.43□□□□□ -0.42
SMAD1-206ENST00000507367 PRXQ9BXM0 1461 aa12.43□□□□□ -0.42
SMAD1-206ENST00000507367 RAPGEF2Q9Y4G8 1499 aa12.41□□□□□ -0.42
SMAD1-206ENST00000507367 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
SMAD1-206ENST00000507367 UBTFP17480 764 aaKnown RBP12.41□□□□□ -0.42
SMAD1-206ENST00000507367 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
SMAD1-206ENST00000507367 MAGI1Q96QZ7 1491 aaPredicted RBP12.39□□□□□ -0.43
SMAD1-206ENST00000507367 FHAD1B1AJZ9 1412 aa12.38□□□□□ -0.43
SMAD1-206ENST00000507367 ADAMTS12P58397 1594 aa12.36□□□□□ -0.43
SMAD1-206ENST00000507367 SNAPC4Q5SXM2 1469 aa12.36□□□□□ -0.43
SMAD1-206ENST00000507367 TNIKQ9UKE5 1360 aa12.35□□□□□ -0.43
SMAD1-206ENST00000507367 SYNJ2O15056 1496 aa12.33□□□□□ -0.44
SMAD1-206ENST00000507367 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
SMAD1-206ENST00000507367 FBLN2P98095 1184 aa12.29□□□□□ -0.44
SMAD1-206ENST00000507367 GRIN2AQ12879 1464 aa12.28□□□□□ -0.44
SMAD1-206ENST00000507367 AEBP2Q6ZN18 517 aaPredicted RBP12.28□□□□□ -0.44
SMAD1-206ENST00000507367 CEP162Q5TB80 1403 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms